data_7O3C # _model_server_result.job_id Hxyr2NCsjrL4p0xNS5Mf4A _model_server_result.datetime_utc '2024-12-23 05:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o3c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"PB","auth_seq_id":303}' # _entry.id 7O3C # _exptl.entry_id 7O3C _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 127.092 _entity.id 35 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DINUCLEAR COPPER ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7O3C _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O3C _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 34-meric _pdbx_struct_assembly.oligomeric_count 34 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 35 _struct_asym.id PB _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 H SG CYS 22 H CYS 22 1_555 H SG CYS 66 H CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 H SG CYS 38 H CYS 38 1_555 H SG CYS 52 H CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 O SG CYS 144 P CYS 144 1_555 O SG CYS 160 P CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 R SG CYS 22 S CYS 22 1_555 R SG CYS 66 S CYS 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 R SG CYS 38 S CYS 38 1_555 R SG CYS 52 S CYS 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf7 DA SG CYS 29 h CYS 29 1_555 DA SG CYS 64 h CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf8 DA SG CYS 39 h CYS 39 1_555 DA SG CYS 53 h CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 D SG CYS 37 D CYS 37 1_555 PA CAB HEC . D HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? covale ? covale2 D SG CYS 40 D CYS 40 1_555 PA CAC HEC . D HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.948 ? covale ? covale3 N SG CYS 37 O CYS 37 1_555 CB CAB HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.689 ? covale ? covale4 N SG CYS 40 O CYS 40 1_555 CB CAC HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc1 C NE2 HIS 83 C HIS 83 1_555 KA FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc2 C NE2 HIS 97 C HIS 97 1_555 LA FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc3 C NE2 HIS 182 C HIS 182 1_555 KA FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc4 C NE2 HIS 196 C HIS 196 1_555 LA FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc5 D NE2 HIS 41 D HIS 41 1_555 PA FE HEC . D HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.89 ? metalc ? metalc6 D SD MET 160 D MET 160 1_555 PA FE HEC . D HEC 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc7 E SG CYS 139 E CYS 139 1_555 RA FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc8 E SG CYS 158 E CYS 158 1_555 RA FE1 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc9 E ND1 HIS 161 E HIS 161 1_555 RA FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc10 E NE2 HIS 161 E HIS 161 1_555 RA FE2 FES . E FES 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc11 M NE2 HIS 83 N HIS 83 1_555 WA FE HEM . N HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc12 M NE2 HIS 97 N HIS 97 1_555 XA FE HEM . N HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc13 M NE2 HIS 182 N HIS 182 1_555 WA FE HEM . N HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc14 M NE2 HIS 196 N HIS 196 1_555 XA FE HEM . N HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc15 N NE2 HIS 41 O HIS 41 1_555 CB FE HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.855 ? metalc ? metalc16 N SD MET 160 O MET 160 1_555 CB FE HEC . O HEC 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc17 O SG CYS 139 P CYS 139 1_555 DB FE1 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc18 O ND1 HIS 141 P HIS 141 1_555 DB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc19 O NE2 HIS 141 P HIS 141 1_555 DB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc20 O SG CYS 158 P CYS 158 1_555 DB FE1 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc21 O ND1 HIS 161 P HIS 161 1_555 DB FE2 FES . P FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc22 W O GLU 40 a GLU 40 1_555 HB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc23 W O GLY 45 a GLY 45 1_555 HB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc24 W NE2 HIS 61 a HIS 61 1_555 IB FE HEA . a HEA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc25 W ND1 HIS 240 a HIS 240 1_555 GB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc26 W NE2 HIS 290 a HIS 290 1_555 GB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc27 W NE2 HIS 291 a HIS 291 1_555 GB CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc28 W NE2 HIS 376 a HIS 376 1_555 JB FE HEA . a HEA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc29 W NE2 HIS 378 a HIS 378 1_555 IB FE HEA . a HEA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc30 W O SER 441 a SER 441 1_555 HB NA NA . a NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc31 X ND1 HIS 161 b HIS 161 1_555 PB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc32 X SG CYS 196 b CYS 196 1_555 PB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc33 X SG CYS 196 b CYS 196 1_555 PB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc34 X OE1 GLU 198 b GLU 198 1_555 NB MG MG . b MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc35 X O GLU 198 b GLU 198 1_555 PB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc36 X SG CYS 200 b CYS 200 1_555 PB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc37 X SG CYS 200 b CYS 200 1_555 PB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc38 X ND1 HIS 204 b HIS 204 1_555 PB CU2 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? metalc ? metalc39 X SD MET 207 b MET 207 1_555 PB CU1 CUA . b CUA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc40 BA SG CYS 61 f CYS 61 1_555 SB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc41 BA SG CYS 63 f CYS 63 1_555 SB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc42 BA SG CYS 83 f CYS 83 1_555 SB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc43 BA SG CYS 86 f CYS 86 1_555 SB ZN ZN . f ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? # _chem_comp.formula Cu2 _chem_comp.formula_weight 127.092 _chem_comp.id CUA _chem_comp.mon_nstd_flag . _chem_comp.name 'DINUCLEAR COPPER ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 CU1 _chem_comp_bond.atom_id_2 CU2 _chem_comp_bond.comp_id CUA _chem_comp_bond.value_order sing _chem_comp_bond.pdbx_ordinal 457 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 7O3C _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code IA 25 3PE A 1 501 206 3PE 3PE . JA 26 CDL A 1 502 207 CDL CDL . KA 27 HEM C 1 401 382 HEM HEM . LA 27 HEM C 1 402 383 HEM HEM . MA 25 3PE C 1 403 385 3PE 3PE . NA 26 CDL C 1 404 386 CDL CDL . OA 26 CDL D 1 301 387 CDL CDL . PA 28 HEC D 1 302 251 HEC HEC . QA 25 3PE E 1 201 249 3PE 3PE . RA 29 FES E 1 202 201 FES FES . SA 25 3PE G 1 101 101 3PE 3PE . TA 30 PC1 J 1 101 205 PC1 PC1 . UA 25 3PE L 1 501 206 3PE 3PE . VA 26 CDL L 1 502 207 CDL CDL . WA 27 HEM N 1 401 382 HEM HEM . XA 27 HEM N 1 402 383 HEM HEM . YA 25 3PE N 1 403 385 3PE 3PE . ZA 26 CDL N 1 404 386 CDL CDL . AB 26 CDL O 1 301 387 CDL CDL . BB 25 3PE O 1 302 249 3PE 3PE . CB 28 HEC O 1 303 251 HEC HEC . DB 29 FES P 1 201 201 FES FES . EB 30 PC1 P 1 202 205 PC1 PC1 . FB 25 3PE R 1 101 101 3PE 3PE . GB 31 CU a 1 601 515 CU CU . HB 32 NA a 1 602 517 NA NA . IB 33 HEA a 1 603 518 HEA HEA . JB 33 HEA a 1 604 519 HEA HEA . KB 25 3PE a 1 605 521 3PE 3PE . LB 25 3PE a 1 606 263 3PE 3PE . MB 25 3PE a 1 607 46 3PE 3PE . NB 34 MG b 1 301 516 MG MG . OB 25 3PE b 1 302 520 3PE 3PE . PB 35 CUA b 1 303 231 CUA CUA . QB 25 3PE b 1 304 77 3PE 3PE . RB 25 3PE c 1 301 262 3PE 3PE . SB 36 ZN f 1 100 100 ZN ZN . TB 26 CDL g 1 301 301 CDL CDL . UB 30 PC1 g 1 302 401 PC1 PC1 . VB 25 3PE g 1 303 85 3PE 3PE . WB 37 TGL l 1 601 601 TGL TGL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CU CU1 CUA . . . PB 35 63.316 39.423 135.516 1 62.47 ? CU1 CUA 303 b 1 HETATM 2 CU CU2 CUA . . . PB 35 62.565 40.611 137.558 1 68.35 ? CU2 CUA 303 b 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 92 _model_server_stats.query_time_ms 510 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 2 #