data_7O4B # _model_server_result.job_id dEttNhUh6ytwZk1Oa1IV_g _model_server_result.datetime_utc '2024-10-11 09:24:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 7O4B # _exptl.entry_id 7O4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7O4B _cell.length_a 180.649 _cell.length_b 180.649 _cell.length_c 223.466 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,S 1 1 B,K,L,M,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 251 A SER 314 1_555 J C7 PNM . A PNM 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale2 B OG SER 251 C SER 314 1_555 R C7 PNM . C PNM 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 7O4B _atom_sites.fract_transf_matrix[1][1] 0.005536 _atom_sites.fract_transf_matrix[1][2] 0.003196 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006392 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 801 601 CIT FLC . D 3 SO4 A 1 802 602 SO4 SO4 . E 2 CIT A 1 803 604 CIT FLC . F 3 SO4 A 1 804 608 SO4 SO4 . G 3 SO4 A 1 805 609 SO4 SO4 . H 3 SO4 A 1 806 610 SO4 SO4 . I 3 SO4 A 1 807 611 SO4 SO4 . J 4 PNM A 1 808 314 PNM PG1 . K 3 SO4 C 1 801 601 SO4 SO4 . L 3 SO4 C 1 802 603 SO4 SO4 . M 3 SO4 C 1 803 604 SO4 SO4 . N 2 CIT C 1 804 605 CIT FLC . O 3 SO4 C 1 805 606 SO4 SO4 . P 3 SO4 C 1 806 607 SO4 SO4 . Q 3 SO4 C 1 807 608 SO4 SO4 . R 4 PNM C 1 808 314 PNM PG1 . S 5 HOH A 1 901 4 HOH HOH . S 5 HOH A 2 902 2 HOH HOH . S 5 HOH A 3 903 32 HOH HOH . S 5 HOH A 4 904 17 HOH HOH . S 5 HOH A 5 905 28 HOH HOH . S 5 HOH A 6 906 39 HOH HOH . S 5 HOH A 7 907 24 HOH HOH . S 5 HOH A 8 908 38 HOH HOH . S 5 HOH A 9 909 31 HOH HOH . S 5 HOH A 10 910 36 HOH HOH . S 5 HOH A 11 911 16 HOH HOH . S 5 HOH A 12 912 15 HOH HOH . S 5 HOH A 13 913 29 HOH HOH . S 5 HOH A 14 914 25 HOH HOH . S 5 HOH A 15 915 19 HOH HOH . S 5 HOH A 16 916 14 HOH HOH . S 5 HOH A 17 917 22 HOH HOH . S 5 HOH A 18 918 13 HOH HOH . S 5 HOH A 19 919 23 HOH HOH . S 5 HOH A 20 920 30 HOH HOH . S 5 HOH A 21 921 43 HOH HOH . S 5 HOH A 22 922 7 HOH HOH . S 5 HOH A 23 923 9 HOH HOH . S 5 HOH A 24 924 37 HOH HOH . S 5 HOH A 25 925 21 HOH HOH . S 5 HOH A 26 926 40 HOH HOH . T 5 HOH C 1 901 11 HOH HOH . T 5 HOH C 2 902 8 HOH HOH . T 5 HOH C 3 903 6 HOH HOH . T 5 HOH C 4 904 26 HOH HOH . T 5 HOH C 5 905 27 HOH HOH . T 5 HOH C 6 906 10 HOH HOH . T 5 HOH C 7 907 41 HOH HOH . T 5 HOH C 8 908 18 HOH HOH . T 5 HOH C 9 909 20 HOH HOH . T 5 HOH C 10 910 35 HOH HOH . T 5 HOH C 11 911 42 HOH HOH . T 5 HOH C 12 912 33 HOH HOH . T 5 HOH C 13 913 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . E 2 -51.763 19.394 -1.038 1 78.67 0 C1 CIT 803 A 1 HETATM 2 O O1 CIT . . . E 2 -52.199 20.426 -1.612 1 63.12 0 O1 CIT 803 A 1 HETATM 3 O O2 CIT . . . E 2 -50.639 19.334 -0.456 1 74.01 0 O2 CIT 803 A 1 HETATM 4 C C2 CIT . . . E 2 -52.606 18.121 -1.079 1 83.53 0 C2 CIT 803 A 1 HETATM 5 C C3 CIT . . . E 2 -54.137 18.285 -1.032 1 90.5 0 C3 CIT 803 A 1 HETATM 6 O O7 CIT . . . E 2 -54.43 19.542 -0.446 1 102.45 0 O7 CIT 803 A 1 HETATM 7 C C4 CIT . . . E 2 -54.714 18.241 -2.457 1 92.94 0 C4 CIT 803 A 1 HETATM 8 C C5 CIT . . . E 2 -56.062 18.911 -2.733 1 80.7 0 C5 CIT 803 A 1 HETATM 9 O O3 CIT . . . E 2 -56.071 19.851 -3.542 1 77.05 0 O3 CIT 803 A 1 HETATM 10 O O4 CIT . . . E 2 -57.107 18.449 -2.219 1 65.57 0 O4 CIT 803 A 1 HETATM 11 C C6 CIT . . . E 2 -54.758 17.11 -0.212 1 99.69 0 C6 CIT 803 A 1 HETATM 12 O O5 CIT . . . E 2 -54.127 16.039 -0.179 1 108.46 0 O5 CIT 803 A 1 HETATM 13 O O6 CIT . . . E 2 -55.868 17.285 0.331 1 103.01 0 O6 CIT 803 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #