data_7O4U # _model_server_result.job_id 8_GVtwDjGIcpHHSlsJtdRQ _model_server_result.datetime_utc '2025-02-05 06:53:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o4u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 7O4U # _exptl.entry_id 7O4U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 88.021 _cell.angle_beta 89.915 _cell.angle_gamma 75.192 _cell.entry_id 7O4U _cell.length_a 49.812 _cell.length_b 86.913 _cell.length_c 88.957 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O4U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 7O4U _atom_sites.fract_transf_matrix[1][1] 0.020075 _atom_sites.fract_transf_matrix[1][2] -0.005307 _atom_sites.fract_transf_matrix[1][3] 0.000158 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011901 _atom_sites.fract_transf_matrix[2][3] -0.000421 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011248 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 801 801 NAD NAD . D 2 NAD B 1 801 801 NAD NAD . E 3 HOH A 1 901 10 HOH HOH . E 3 HOH A 2 902 4 HOH HOH . E 3 HOH A 3 903 1 HOH HOH . E 3 HOH A 4 904 5 HOH HOH . E 3 HOH A 5 905 13 HOH HOH . E 3 HOH A 6 906 3 HOH HOH . E 3 HOH A 7 907 12 HOH HOH . E 3 HOH A 8 908 8 HOH HOH . F 3 HOH B 1 901 6 HOH HOH . F 3 HOH B 2 902 9 HOH HOH . F 3 HOH B 3 903 16 HOH HOH . F 3 HOH B 4 904 7 HOH HOH . F 3 HOH B 5 905 2 HOH HOH . F 3 HOH B 6 906 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 -19.479 34.146 -22.283 1 100.2 ? PA NAD 801 A 1 HETATM 2 O O1A NAD . . . C 2 -19.464 35.398 -23.096 1 64.07 ? O1A NAD 801 A 1 HETATM 3 O O2A NAD . . . C 2 -20.313 32.999 -22.751 1 82.8 ? O2A NAD 801 A 1 HETATM 4 O O5B NAD . . . C 2 -19.853 34.499 -20.766 1 103.12 ? O5B NAD 801 A 1 HETATM 5 C C5B NAD . . . C 2 -18.989 35.42 -20.053 1 90.98 ? C5B NAD 801 A 1 HETATM 6 C C4B NAD . . . C 2 -19.269 35.312 -18.575 1 101.99 ? C4B NAD 801 A 1 HETATM 7 O O4B NAD . . . C 2 -18.771 36.491 -17.892 1 103.84 ? O4B NAD 801 A 1 HETATM 8 C C3B NAD . . . C 2 -20.743 35.172 -18.158 1 110.29 ? C3B NAD 801 A 1 HETATM 9 O O3B NAD . . . C 2 -20.887 34.033 -17.32 1 113.77 ? O3B NAD 801 A 1 HETATM 10 C C2B NAD . . . C 2 -21.004 36.454 -17.358 1 116.62 ? C2B NAD 801 A 1 HETATM 11 O O2B NAD . . . C 2 -22.005 36.326 -16.371 1 110.09 ? O2B NAD 801 A 1 HETATM 12 C C1B NAD . . . C 2 -19.615 36.719 -16.792 1 110.29 ? C1B NAD 801 A 1 HETATM 13 N N9A NAD . . . C 2 -19.423 38.082 -16.311 1 97.73 ? N9A NAD 801 A 1 HETATM 14 C C8A NAD . . . C 2 -20.003 39.219 -16.815 1 98.16 ? C8A NAD 801 A 1 HETATM 15 N N7A NAD . . . C 2 -19.657 40.307 -16.174 1 85.71 ? N7A NAD 801 A 1 HETATM 16 C C5A NAD . . . C 2 -18.807 39.86 -15.173 1 85.08 ? C5A NAD 801 A 1 HETATM 17 C C6A NAD . . . C 2 -18.112 40.535 -14.152 1 89.59 ? C6A NAD 801 A 1 HETATM 18 N N6A NAD . . . C 2 -18.172 41.85 -13.963 1 73.2 ? N6A NAD 801 A 1 HETATM 19 N N1A NAD . . . C 2 -17.353 39.788 -13.315 1 102.15 ? N1A NAD 801 A 1 HETATM 20 C C2A NAD . . . C 2 -17.3 38.464 -13.509 1 94.33 ? C2A NAD 801 A 1 HETATM 21 N N3A NAD . . . C 2 -17.906 37.725 -14.433 1 90.36 ? N3A NAD 801 A 1 HETATM 22 C C4A NAD . . . C 2 -18.656 38.489 -15.245 1 94.25 ? C4A NAD 801 A 1 HETATM 23 O O3 NAD . . . C 2 -17.975 33.645 -22.059 1 104.3 ? O3 NAD 801 A 1 HETATM 24 P PN NAD . . . C 2 -16.779 33.235 -23.04 1 98.97 ? PN NAD 801 A 1 HETATM 25 O O1N NAD . . . C 2 -16.329 31.857 -22.685 1 96.94 ? O1N NAD 801 A 1 HETATM 26 O O2N NAD . . . C 2 -17.203 33.507 -24.446 1 99.28 ? O2N NAD 801 A 1 HETATM 27 O O5D NAD . . . C 2 -15.651 34.292 -22.612 1 85.12 ? O5D NAD 801 A 1 HETATM 28 C C5D NAD . . . C 2 -14.32 34.065 -23.134 1 105.38 ? C5D NAD 801 A 1 HETATM 29 C C4D NAD . . . C 2 -13.577 35.373 -23.244 1 93.88 ? C4D NAD 801 A 1 HETATM 30 O O4D NAD . . . C 2 -12.49 35.191 -24.175 1 90.72 ? O4D NAD 801 A 1 HETATM 31 C C3D NAD . . . C 2 -14.369 36.533 -23.857 1 100.24 ? C3D NAD 801 A 1 HETATM 32 O O3D NAD . . . C 2 -13.677 37.758 -23.652 1 105.61 ? O3D NAD 801 A 1 HETATM 33 C C2D NAD . . . C 2 -14.333 36.122 -25.333 1 113.47 ? C2D NAD 801 A 1 HETATM 34 O O2D NAD . . . C 2 -14.583 37.173 -26.253 1 104.05 ? O2D NAD 801 A 1 HETATM 35 C C1D NAD . . . C 2 -12.944 35.502 -25.501 1 113.2 ? C1D NAD 801 A 1 HETATM 36 N N1N NAD . . . C 2 -12.984 34.243 -26.305 1 122.23 ? N1N NAD 801 A 1 HETATM 37 C C2N NAD . . . C 2 -14.135 33.495 -26.364 1 110.94 ? C2N NAD 801 A 1 HETATM 38 C C3N NAD . . . C 2 -14.151 32.271 -27.019 1 117.14 ? C3N NAD 801 A 1 HETATM 39 C C7N NAD . . . C 2 -15.395 31.423 -26.928 1 112.31 ? C7N NAD 801 A 1 HETATM 40 O O7N NAD . . . C 2 -15.43 30.335 -27.499 1 111.82 ? O7N NAD 801 A 1 HETATM 41 N N7N NAD . . . C 2 -16.409 31.896 -26.218 1 108.52 ? N7N NAD 801 A 1 HETATM 42 C C4N NAD . . . C 2 -13.025 31.875 -27.733 1 106.23 ? C4N NAD 801 A 1 HETATM 43 C C5N NAD . . . C 2 -11.898 32.667 -27.726 1 101.79 ? C5N NAD 801 A 1 HETATM 44 C C6N NAD . . . C 2 -11.89 33.834 -26.993 1 111.01 ? C6N NAD 801 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 44 #