data_7O4U
#
_model_server_result.job_id            dHD92Fe1QonOtHCLaLpN8g 
_model_server_result.datetime_utc      '2025-02-05 07:01:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7o4u 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":801}' 
#
_entry.id    7O4U 
#
_exptl.entry_id    7O4U 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.021 
_cell.angle_beta          89.915 
_cell.angle_gamma         75.192 
_cell.entry_id            7O4U 
_cell.length_a            49.812 
_cell.length_b            86.913 
_cell.length_c            88.957 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7O4U 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     7O4U 
_atom_sites.fract_transf_matrix[1][1]    0.020075 
_atom_sites.fract_transf_matrix[1][2]    -0.005307 
_atom_sites.fract_transf_matrix[1][3]    0.000158 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011901 
_atom_sites.fract_transf_matrix[2][3]    -0.000421 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011248 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAD A 1 801 801 NAD NAD . 
D 2 NAD B 1 801 801 NAD NAD . 
E 3 HOH A 1 901 10 HOH HOH . 
E 3 HOH A 2 902 4 HOH HOH . 
E 3 HOH A 3 903 1 HOH HOH . 
E 3 HOH A 4 904 5 HOH HOH . 
E 3 HOH A 5 905 13 HOH HOH . 
E 3 HOH A 6 906 3 HOH HOH . 
E 3 HOH A 7 907 12 HOH HOH . 
E 3 HOH A 8 908 8 HOH HOH . 
F 3 HOH B 1 901 6 HOH HOH . 
F 3 HOH B 2 902 9 HOH HOH . 
F 3 HOH B 3 903 16 HOH HOH . 
F 3 HOH B 4 904 7 HOH HOH . 
F 3 HOH B 5 905 2 HOH HOH . 
F 3 HOH B 6 906 14 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . D 2 -18.13 -29.328 -89.558 1 92.99 ? PA NAD 801 B 1 
HETATM 2 O O1A NAD . . . D 2 -19.011 -30.331 -88.891 1 94.72 ? O1A NAD 801 B 1 
HETATM 3 O O2A NAD . . . D 2 -18.472 -27.883 -89.393 1 84.92 ? O2A NAD 801 B 1 
HETATM 4 O O5B NAD . . . D 2 -18.008 -29.661 -91.122 1 85.04 ? O5B NAD 801 B 1 
HETATM 5 C C5B NAD . . . D 2 -17.467 -30.919 -91.599 1 85.86 ? C5B NAD 801 B 1 
HETATM 6 C C4B NAD . . . D 2 -17.489 -30.887 -93.108 1 87.86 ? C4B NAD 801 B 1 
HETATM 7 O O4B NAD . . . D 2 -16.922 -32.097 -93.669 1 77.32 ? O4B NAD 801 B 1 
HETATM 8 C C3B NAD . . . D 2 -18.867 -30.736 -93.776 1 77.83 ? C3B NAD 801 B 1 
HETATM 9 O O3B NAD . . . D 2 -18.946 -29.474 -94.425 1 82.46 ? O3B NAD 801 B 1 
HETATM 10 C C2B NAD . . . D 2 -18.909 -31.89 -94.787 1 86.35 ? C2B NAD 801 B 1 
HETATM 11 O O2B NAD . . . D 2 -19.601 -31.581 -95.977 1 97.2 ? O2B NAD 801 B 1 
HETATM 12 C C1B NAD . . . D 2 -17.424 -32.168 -94.979 1 82.89 ? C1B NAD 801 B 1 
HETATM 13 N N9A NAD . . . D 2 -17.124 -33.47 -95.562 1 72.38 ? N9A NAD 801 B 1 
HETATM 14 C C8A NAD . . . D 2 -17.548 -34.701 -95.124 1 72.15 ? C8A NAD 801 B 1 
HETATM 15 N N7A NAD . . . D 2 -17.121 -35.691 -95.869 1 62.36 ? N7A NAD 801 B 1 
HETATM 16 C C5A NAD . . . D 2 -16.375 -35.077 -96.865 1 64.86 ? C5A NAD 801 B 1 
HETATM 17 C C6A NAD . . . D 2 -15.661 -35.586 -97.968 1 84.28 ? C6A NAD 801 B 1 
HETATM 18 N N6A NAD . . . D 2 -15.58 -36.88 -98.265 1 78.03 ? N6A NAD 801 B 1 
HETATM 19 N N1A NAD . . . D 2 -15.028 -34.695 -98.767 1 82.91 ? N1A NAD 801 B 1 
HETATM 20 C C2A NAD . . . D 2 -15.113 -33.394 -98.466 1 83.32 ? C2A NAD 801 B 1 
HETATM 21 N N3A NAD . . . D 2 -15.753 -32.802 -97.462 1 82.97 ? N3A NAD 801 B 1 
HETATM 22 C C4A NAD . . . D 2 -16.372 -33.707 -96.687 1 69.53 ? C4A NAD 801 B 1 
HETATM 23 O O3 NAD . . . D 2 -16.626 -29.543 -89.048 1 101.22 ? O3 NAD 801 B 1 
HETATM 24 P PN NAD . . . D 2 -15.883 -28.876 -87.794 1 91.5 ? PN NAD 801 B 1 
HETATM 25 O O1N NAD . . . D 2 -15.466 -27.497 -88.183 1 93.83 ? O1N NAD 801 B 1 
HETATM 26 O O2N NAD . . . D 2 -16.755 -29.027 -86.591 1 96.83 ? O2N NAD 801 B 1 
HETATM 27 O O5D NAD . . . D 2 -14.589 -29.806 -87.628 1 87.66 ? O5D NAD 801 B 1 
HETATM 28 C C5D NAD . . . D 2 -13.605 -29.891 -88.687 1 78.51 ? C5D NAD 801 B 1 
HETATM 29 C C4D NAD . . . D 2 -12.384 -30.604 -88.158 1 90.29 ? C4D NAD 801 B 1 
HETATM 30 O O4D NAD . . . D 2 -11.885 -29.866 -87.018 1 90.79 ? O4D NAD 801 B 1 
HETATM 31 C C3D NAD . . . D 2 -12.603 -32.038 -87.655 1 92.94 ? C3D NAD 801 B 1 
HETATM 32 O O3D NAD . . . D 2 -11.471 -32.841 -87.961 1 89.54 ? O3D NAD 801 B 1 
HETATM 33 C C2D NAD . . . D 2 -12.724 -31.817 -86.145 1 92.74 ? C2D NAD 801 B 1 
HETATM 34 O O2D NAD . . . D 2 -12.5 -32.979 -85.364 1 92.09 ? O2D NAD 801 B 1 
HETATM 35 C C1D NAD . . . D 2 -11.652 -30.759 -85.934 1 88.66 ? C1D NAD 801 B 1 
HETATM 36 N N1N NAD . . . D 2 -11.834 -30.011 -84.657 1 108.87 ? N1N NAD 801 B 1 
HETATM 37 C C2N NAD . . . D 2 -13.097 -29.722 -84.201 1 113.14 ? C2N NAD 801 B 1 
HETATM 38 C C3N NAD . . . D 2 -13.27 -29.005 -83.023 1 122.94 ? C3N NAD 801 B 1 
HETATM 39 C C7N NAD . . . D 2 -14.668 -28.646 -82.587 1 128.36 ? C7N NAD 801 B 1 
HETATM 40 O O7N NAD . . . D 2 -14.832 -28.007 -81.549 1 120.66 ? O7N NAD 801 B 1 
HETATM 41 N N7N NAD . . . D 2 -15.671 -29.039 -83.358 1 116.59 ? N7N NAD 801 B 1 
HETATM 42 C C4N NAD . . . D 2 -12.152 -28.644 -82.28 1 110.56 ? C4N NAD 801 B 1 
HETATM 43 C C5N NAD . . . D 2 -10.893 -28.957 -82.74 1 103.11 ? C5N NAD 801 B 1 
HETATM 44 C C6N NAD . . . D 2 -10.755 -29.627 -83.935 1 105.95 ? C6N NAD 801 B 1 
#
_model_server_stats.io_time_ms              36 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           44 
#