data_7O7I # _model_server_result.job_id getWgvT25GDQ7Z1VokkdRg _model_server_result.datetime_utc '2024-10-20 08:09:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o7i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7O7I # _exptl.entry_id 7O7I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7O7I _cell.length_a 80.279 _cell.length_b 80.279 _cell.length_c 181.989 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O7I _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 200 A THR 358 1_555 A N PTR 201 A PTR 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C PTR 201 A PTR 359 1_555 A N LEU 202 A LEU 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7O7I _atom_sites.fract_transf_matrix[1][1] 0.012457 _atom_sites.fract_transf_matrix[1][2] 0.007192 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 601 902 EDO EDO . C 3 HOH A 1 701 63 HOH HOH . C 3 HOH A 2 702 66 HOH HOH . C 3 HOH A 3 703 39 HOH HOH . C 3 HOH A 4 704 55 HOH HOH . C 3 HOH A 5 705 6 HOH HOH . C 3 HOH A 6 706 23 HOH HOH . C 3 HOH A 7 707 13 HOH HOH . C 3 HOH A 8 708 1 HOH HOH . C 3 HOH A 9 709 7 HOH HOH . C 3 HOH A 10 710 15 HOH HOH . C 3 HOH A 11 711 26 HOH HOH . C 3 HOH A 12 712 17 HOH HOH . C 3 HOH A 13 713 8 HOH HOH . C 3 HOH A 14 714 19 HOH HOH . C 3 HOH A 15 715 65 HOH HOH . C 3 HOH A 16 716 38 HOH HOH . C 3 HOH A 17 717 43 HOH HOH . C 3 HOH A 18 718 33 HOH HOH . C 3 HOH A 19 719 22 HOH HOH . C 3 HOH A 20 720 14 HOH HOH . C 3 HOH A 21 721 34 HOH HOH . C 3 HOH A 22 722 32 HOH HOH . C 3 HOH A 23 723 35 HOH HOH . C 3 HOH A 24 724 20 HOH HOH . C 3 HOH A 25 725 42 HOH HOH . C 3 HOH A 26 726 36 HOH HOH . C 3 HOH A 27 727 25 HOH HOH . C 3 HOH A 28 728 24 HOH HOH . C 3 HOH A 29 729 11 HOH HOH . C 3 HOH A 30 730 37 HOH HOH . C 3 HOH A 31 731 30 HOH HOH . C 3 HOH A 32 732 59 HOH HOH . C 3 HOH A 33 733 52 HOH HOH . C 3 HOH A 34 734 68 HOH HOH . C 3 HOH A 35 735 47 HOH HOH . C 3 HOH A 36 736 45 HOH HOH . C 3 HOH A 37 737 61 HOH HOH . C 3 HOH A 38 738 9 HOH HOH . C 3 HOH A 39 739 49 HOH HOH . C 3 HOH A 40 740 46 HOH HOH . C 3 HOH A 41 741 10 HOH HOH . C 3 HOH A 42 742 69 HOH HOH . C 3 HOH A 43 743 18 HOH HOH . C 3 HOH A 44 744 2 HOH HOH . C 3 HOH A 45 745 41 HOH HOH . C 3 HOH A 46 746 27 HOH HOH . C 3 HOH A 47 747 64 HOH HOH . C 3 HOH A 48 748 4 HOH HOH . C 3 HOH A 49 749 12 HOH HOH . C 3 HOH A 50 750 67 HOH HOH . C 3 HOH A 51 751 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -52.713 8.835 -48.047 1 86.98 ? C1 EDO 601 A 1 HETATM 2 O O1 EDO . . . B 2 -52.336 7.514 -47.773 1 88.54 ? O1 EDO 601 A 1 HETATM 3 C C2 EDO . . . B 2 -51.794 9.373 -49.14 1 83.27 ? C2 EDO 601 A 1 HETATM 4 O O2 EDO . . . B 2 -51.443 8.305 -49.976 1 80.42 ? O2 EDO 601 A 1 # _model_server_stats.io_time_ms 87 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #