data_7O83 # _model_server_result.job_id nQU2HZGpsPAPHnRU5-beBw _model_server_result.datetime_utc '2024-11-23 01:13:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7o83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 7O83 # _exptl.entry_id 7O83 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 96.39 _cell.angle_beta 95.01 _cell.angle_gamma 103.15 _cell.entry_id 7O83 _cell.length_a 33.509 _cell.length_b 39.227 _cell.length_c 65.721 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7O83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 E C V52 . A V52 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.648 ? covale ? covale2 B SG CYS 13 B CYS 12 1_555 I C V52 . B V52 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.577 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc2 A OE1 GLU 64 A GLU 63 1_555 F CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc3 A OE2 GLU 64 A GLU 63 1_555 F CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.814 ? metalc ? metalc4 A O GLY 139 A GLY 138 1_555 F CA CA . A CA 204 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc5 C MG MG . A MG 201 1_555 D O3B GDP . A GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc6 C MG MG . A MG 201 1_555 J O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc7 C MG MG . A MG 201 1_555 J O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? metalc ? metalc8 C MG MG . A MG 201 1_555 J O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc9 C MG MG . A MG 201 1_555 J O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? metalc ? metalc10 F CA CA . A CA 204 1_555 J O HOH . A HOH 337 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc11 B OG SER 18 B SER 17 1_555 G MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc12 G MG MG . B MG 201 1_555 H O1B GDP . B GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc13 G MG MG . B MG 201 1_555 K O HOH . B HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc14 G MG MG . B MG 201 1_555 K O HOH . B HOH 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc15 G MG MG . B MG 201 1_555 K O HOH . B HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc16 G MG MG . B MG 201 1_555 K O HOH . B HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7O83 _atom_sites.fract_transf_matrix[1][1] 0.029843 _atom_sites.fract_transf_matrix[1][2] 0.006972 _atom_sites.fract_transf_matrix[1][3] 0.003592 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026179 _atom_sites.fract_transf_matrix[2][3] 0.003573 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 201 201 MG MG . D 3 GDP A 1 202 206 GDP GDP . E 4 V52 A 1 203 1 V52 INH . F 5 CA A 1 204 1 CA CA . G 2 MG B 1 201 201 MG MG . H 3 GDP B 1 202 206 GDP GDP . I 4 V52 B 1 203 2 V52 INH . J 6 HOH A 1 301 66 HOH HOH . J 6 HOH A 2 302 58 HOH HOH . J 6 HOH A 3 303 15 HOH HOH . J 6 HOH A 4 304 75 HOH HOH . J 6 HOH A 5 305 56 HOH HOH . J 6 HOH A 6 306 6 HOH HOH . J 6 HOH A 7 307 33 HOH HOH . J 6 HOH A 8 308 49 HOH HOH . J 6 HOH A 9 309 14 HOH HOH . J 6 HOH A 10 310 82 HOH HOH . J 6 HOH A 11 311 30 HOH HOH . J 6 HOH A 12 312 46 HOH HOH . J 6 HOH A 13 313 48 HOH HOH . J 6 HOH A 14 314 65 HOH HOH . J 6 HOH A 15 315 42 HOH HOH . J 6 HOH A 16 316 38 HOH HOH . J 6 HOH A 17 317 76 HOH HOH . J 6 HOH A 18 318 79 HOH HOH . J 6 HOH A 19 319 69 HOH HOH . J 6 HOH A 20 320 31 HOH HOH . J 6 HOH A 21 321 78 HOH HOH . J 6 HOH A 22 322 24 HOH HOH . J 6 HOH A 23 323 83 HOH HOH . J 6 HOH A 24 324 36 HOH HOH . J 6 HOH A 25 325 17 HOH HOH . J 6 HOH A 26 326 34 HOH HOH . J 6 HOH A 27 327 61 HOH HOH . J 6 HOH A 28 328 80 HOH HOH . J 6 HOH A 29 329 8 HOH HOH . J 6 HOH A 30 330 10 HOH HOH . J 6 HOH A 31 331 52 HOH HOH . J 6 HOH A 32 332 27 HOH HOH . J 6 HOH A 33 333 94 HOH HOH . J 6 HOH A 34 334 53 HOH HOH . J 6 HOH A 35 335 51 HOH HOH . J 6 HOH A 36 336 77 HOH HOH . J 6 HOH A 37 337 81 HOH HOH . K 6 HOH B 1 301 21 HOH HOH . K 6 HOH B 2 302 67 HOH HOH . K 6 HOH B 3 303 16 HOH HOH . K 6 HOH B 4 304 23 HOH HOH . K 6 HOH B 5 305 13 HOH HOH . K 6 HOH B 6 306 59 HOH HOH . K 6 HOH B 7 307 70 HOH HOH . K 6 HOH B 8 308 44 HOH HOH . K 6 HOH B 9 309 68 HOH HOH . K 6 HOH B 10 310 9 HOH HOH . K 6 HOH B 11 311 32 HOH HOH . K 6 HOH B 12 312 89 HOH HOH . K 6 HOH B 13 313 54 HOH HOH . K 6 HOH B 14 314 73 HOH HOH . K 6 HOH B 15 315 74 HOH HOH . K 6 HOH B 16 316 40 HOH HOH . K 6 HOH B 17 317 86 HOH HOH . K 6 HOH B 18 318 45 HOH HOH . K 6 HOH B 19 319 7 HOH HOH . K 6 HOH B 20 320 28 HOH HOH . K 6 HOH B 21 321 19 HOH HOH . K 6 HOH B 22 322 88 HOH HOH . K 6 HOH B 23 323 26 HOH HOH . K 6 HOH B 24 324 12 HOH HOH . K 6 HOH B 25 325 87 HOH HOH . K 6 HOH B 26 326 37 HOH HOH . K 6 HOH B 27 327 39 HOH HOH . K 6 HOH B 28 328 84 HOH HOH . K 6 HOH B 29 329 72 HOH HOH . K 6 HOH B 30 330 47 HOH HOH . K 6 HOH B 31 331 43 HOH HOH . K 6 HOH B 32 332 55 HOH HOH . K 6 HOH B 33 333 92 HOH HOH . K 6 HOH B 34 334 63 HOH HOH . K 6 HOH B 35 335 93 HOH HOH . K 6 HOH B 36 336 29 HOH HOH . K 6 HOH B 37 337 50 HOH HOH . K 6 HOH B 38 338 35 HOH HOH . K 6 HOH B 39 339 90 HOH HOH . K 6 HOH B 40 340 18 HOH HOH . K 6 HOH B 41 341 85 HOH HOH . K 6 HOH B 42 342 11 HOH HOH . K 6 HOH B 43 343 57 HOH HOH . K 6 HOH B 44 344 25 HOH HOH . K 6 HOH B 45 345 64 HOH HOH . K 6 HOH B 46 346 22 HOH HOH . K 6 HOH B 47 347 62 HOH HOH . K 6 HOH B 48 348 20 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.87 _atom_site.Cartn_y -8.746 _atom_site.Cartn_z -0.721 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 1.58 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #