data_7O8S
#
_model_server_result.job_id            sr1NYtKNr_P8bizJgw0dmg 
_model_server_result.datetime_utc      '2024-11-26 21:20:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7o8s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    7O8S 
#
_exptl.entry_id    7O8S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          131.78 
_cell.angle_gamma         90 
_cell.entry_id            7O8S 
_cell.length_a            104.48 
_cell.length_b            51.18 
_cell.length_c            78.33 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7O8S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 I N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             251 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              235 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              301 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.333 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 290 n n 
C10 C9 OLC doub 291 n n 
C10 C11 OLC sing 292 n n 
C9 C8 OLC sing 293 n n 
C17 C16 OLC sing 294 z n 
C11 C12 OLC sing 295 n n 
C8 C7 OLC sing 296 n n 
C24 C22 OLC sing 297 n n 
C24 O25 OLC sing 298 n n 
C16 C15 OLC sing 299 n n 
C12 C13 OLC sing 300 n n 
C7 C6 OLC sing 301 n n 
C15 C14 OLC sing 302 n n 
C13 C14 OLC sing 303 n n 
C6 C5 OLC sing 304 n n 
C5 C4 OLC sing 305 n n 
C4 C3 OLC sing 306 n n 
C3 C2 OLC sing 307 n n 
C2 C1 OLC sing 308 n n 
C21 C22 OLC sing 309 n n 
C21 O20 OLC sing 310 n n 
C1 O19 OLC doub 311 n n 
C1 O20 OLC sing 312 n n 
C22 O23 OLC sing 313 n n 
C18 H18 OLC sing 314 n n 
C18 H18A OLC sing 315 n n 
C18 H18B OLC sing 316 n n 
C10 H10 OLC sing 317 n n 
C9 H9 OLC sing 318 n n 
C17 H17 OLC sing 319 n n 
C17 H17A OLC sing 320 n n 
C11 H11 OLC sing 321 n n 
C11 H11A OLC sing 322 n n 
C8 H8 OLC sing 323 n n 
C8 H8A OLC sing 324 n n 
C24 H24 OLC sing 325 n n 
C24 H24A OLC sing 326 n n 
C16 H16 OLC sing 327 n n 
C16 H16A OLC sing 328 n n 
C12 H12 OLC sing 329 n n 
C12 H12A OLC sing 330 n n 
C7 H7 OLC sing 331 n n 
C7 H7A OLC sing 332 n n 
C15 H15 OLC sing 333 n n 
C15 H15A OLC sing 334 n n 
C13 H13 OLC sing 335 n n 
C13 H13A OLC sing 336 n n 
C6 H6 OLC sing 337 n n 
C6 H6A OLC sing 338 n n 
C14 H14 OLC sing 339 n n 
C14 H14A OLC sing 340 n n 
C5 H5 OLC sing 341 n n 
C5 H5A OLC sing 342 n n 
C4 H4 OLC sing 343 n n 
C4 H4A OLC sing 344 n n 
C3 H3 OLC sing 345 n n 
C3 H3A OLC sing 346 n n 
C2 H2 OLC sing 347 n n 
C2 H2A OLC sing 348 n n 
C21 H21 OLC sing 349 n n 
C21 H21A OLC sing 350 n n 
C22 H22 OLC sing 351 n n 
O25 HO25 OLC sing 352 n n 
O23 HO23 OLC sing 353 n n 
#
_atom_sites.entry_id                     7O8S 
_atom_sites.fract_transf_matrix[1][1]    0.009571 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008552 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019539 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01712 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 RET A 1 301 301 RET RET . 
C 3 CL A 1 302 355 CL CL . 
D 4 OLC A 1 303 501 OLC OLC . 
E 4 OLC A 1 304 502 OLC OLC . 
F 5 OLA A 1 305 503 OLA OLA . 
G 5 OLA A 1 306 504 OLA OLA . 
H 5 OLA A 1 307 505 OLA OLA . 
I 4 OLC A 1 308 506 OLC OLC . 
J 5 OLA A 1 309 508 OLA OLA . 
K 6 HOH A 1 401 443 HOH HOH . 
K 6 HOH A 2 402 483 HOH HOH . 
K 6 HOH A 3 403 473 HOH HOH . 
K 6 HOH A 4 404 468 HOH HOH . 
K 6 HOH A 5 405 455 HOH HOH . 
K 6 HOH A 6 406 408 HOH HOH . 
K 6 HOH A 7 407 467 HOH HOH . 
K 6 HOH A 8 408 430 HOH HOH . 
K 6 HOH A 9 409 438 HOH HOH . 
K 6 HOH A 10 410 411 HOH HOH . 
K 6 HOH A 11 411 429 HOH HOH . 
K 6 HOH A 12 412 404 HOH HOH . 
K 6 HOH A 13 413 449 HOH HOH . 
K 6 HOH A 14 414 447 HOH HOH . 
K 6 HOH A 15 415 427 HOH HOH . 
K 6 HOH A 16 416 417 HOH HOH . 
K 6 HOH A 17 417 410 HOH HOH . 
K 6 HOH A 18 418 420 HOH HOH . 
K 6 HOH A 19 419 406 HOH HOH . 
K 6 HOH A 20 420 405 HOH HOH . 
K 6 HOH A 21 421 412 HOH HOH . 
K 6 HOH A 22 422 421 HOH HOH . 
K 6 HOH A 23 423 401 HOH HOH . 
K 6 HOH A 24 424 415 HOH HOH . 
K 6 HOH A 25 425 424 HOH HOH . 
K 6 HOH A 26 426 465 HOH HOH . 
K 6 HOH A 27 427 464 HOH HOH . 
K 6 HOH A 28 428 418 HOH HOH . 
K 6 HOH A 29 429 436 HOH HOH . 
K 6 HOH A 30 430 452 HOH HOH . 
K 6 HOH A 31 431 456 HOH HOH . 
K 6 HOH A 32 432 428 HOH HOH . 
K 6 HOH A 33 433 451 HOH HOH . 
K 6 HOH A 34 434 459 HOH HOH . 
K 6 HOH A 35 435 481 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . D 4 -31.08 -24.56 -1.648 1 43.55 ? C18 OLC 303 A 1 
HETATM 2 C C10 OLC . . . D 4 -31.797 -21.579 7.697 1 49.55 ? C10 OLC 303 A 1 
HETATM 3 C C9 OLC . . . D 4 -30.888 -21.111 8.54 1 52.71 ? C9 OLC 303 A 1 
HETATM 4 C C17 OLC . . . D 4 -31.586 -23.632 -0.547 1 44.28 ? C17 OLC 303 A 1 
HETATM 5 C C11 OLC . . . D 4 -31.683 -21.446 6.178 1 50.01 ? C11 OLC 303 A 1 
HETATM 6 C C8 OLC . . . D 4 -29.617 -20.383 8.097 1 53.49 ? C8 OLC 303 A 1 
HETATM 7 C C24 OLC . . . D 4 -27.113 -20.147 19.724 1 44.8 ? C24 OLC 303 A 1 
HETATM 8 C C16 OLC . . . D 4 -31.292 -24.234 0.827 1 43.94 ? C16 OLC 303 A 1 
HETATM 9 C C12 OLC . . . D 4 -32.151 -22.749 5.525 1 48.09 ? C12 OLC 303 A 1 
HETATM 10 C C7 OLC . . . D 4 -28.495 -20.724 9.079 1 43.9 ? C7 OLC 303 A 1 
HETATM 11 C C15 OLC . . . D 4 -31.387 -23.126 1.874 1 46.29 ? C15 OLC 303 A 1 
HETATM 12 C C13 OLC . . . D 4 -32.407 -22.49 4.042 1 51.39 ? C13 OLC 303 A 1 
HETATM 13 C C6 OLC . . . D 4 -27.606 -19.507 9.322 1 41.57 ? C6 OLC 303 A 1 
HETATM 14 C C14 OLC . . . D 4 -31.948 -23.671 3.187 1 49.29 ? C14 OLC 303 A 1 
HETATM 15 C C5 OLC . . . D 4 -26.864 -19.699 10.642 1 40.29 ? C5 OLC 303 A 1 
HETATM 16 C C4 OLC . . . D 4 -27.547 -18.883 11.737 1 42.34 ? C4 OLC 303 A 1 
HETATM 17 C C3 OLC . . . D 4 -26.85 -19.168 13.068 1 41.65 ? C3 OLC 303 A 1 
HETATM 18 C C2 OLC . . . D 4 -27.873 -19.529 14.145 1 44.12 ? C2 OLC 303 A 1 
HETATM 19 C C21 OLC . . . D 4 -27.848 -20.13 17.336 1 46.53 ? C21 OLC 303 A 1 
HETATM 20 C C1 OLC . . . D 4 -27.3 -20.579 15.1 1 45.54 ? C1 OLC 303 A 1 
HETATM 21 C C22 OLC . . . D 4 -27.015 -20.867 18.382 1 44.65 ? C22 OLC 303 A 1 
HETATM 22 O O19 OLC . . . D 4 -26.244 -21.076 14.891 1 43.43 ? O19 OLC 303 A 1 
HETATM 23 O O25 OLC . . . D 4 -26.014 -20.502 20.516 1 47.41 ? O25 OLC 303 A 1 
HETATM 24 O O23 OLC . . . D 4 -27.49 -22.177 18.52 1 44.92 ? O23 OLC 303 A 1 
HETATM 25 O O20 OLC . . . D 4 -28.027 -20.967 16.23 1 49.58 ? O20 OLC 303 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           433 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           25 
#