data_7OCD # _model_server_result.job_id eCpJJiITDut7faaWz1ZyPQ _model_server_result.datetime_utc '2025-04-28 00:00:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ocd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":901}' # _entry.id 7OCD # _exptl.entry_id 7OCD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 336.28 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-nitro-2,3-bis(oxidanylidene)-1,4-dihydrobenzo[f]quinoxaline-7-sulfonamide _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OCD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 M N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 740 A CYS 714 1_555 A SG CYS 795 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 740 C CYS 714 1_555 B SG CYS 795 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 739 D CYS 718 1_555 C SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 D SG CYS 52 I CYS 52 1_555 D SG CYS 91 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 D SG CYS 90 I CYS 90 1_555 D SG CYS 100 I CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 52 J CYS 52 1_555 E SG CYS 91 J CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 E SG CYS 90 J CYS 90 1_555 E SG CYS 100 J CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 F SG CYS 739 B CYS 718 1_555 F SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C12 H8 N4 O6 S' _chem_comp.formula_weight 336.28 _chem_comp.id E2Q _chem_comp.mon_nstd_flag . _chem_comp.name 6-nitro-2,3-bis(oxidanylidene)-1,4-dihydrobenzo[f]quinoxaline-7-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N14 S11 E2Q sing 83 n n O16 N15 E2Q doub 84 n n S11 O13 E2Q doub 85 n n S11 O12 E2Q doub 86 n n S11 C09 E2Q sing 87 n n N15 O17 E2Q sing 88 n n N15 C07 E2Q sing 89 n n C09 C10 E2Q doub 90 n y C09 C08 E2Q sing 91 n y C07 C08 E2Q doub 92 n y C07 C06 E2Q sing 93 n y C10 C01 E2Q sing 94 n y C08 C03 E2Q sing 95 n y C06 C05 E2Q doub 96 n y C01 C02 E2Q doub 97 n y C03 C02 E2Q sing 98 n y C03 C04 E2Q doub 99 n y C05 C04 E2Q sing 100 n y C05 N18 E2Q sing 101 n n C04 N23 E2Q sing 102 n n N18 C19 E2Q sing 103 n n N23 C21 E2Q sing 104 n n C19 O20 E2Q doub 105 n n C19 C21 E2Q sing 106 n n C21 O22 E2Q doub 107 n n C01 H011 E2Q sing 108 n n C02 H021 E2Q sing 109 n n C06 H061 E2Q sing 110 n n C10 H101 E2Q sing 111 n n N14 H141 E2Q sing 112 n n N14 H142 E2Q sing 113 n n N18 H181 E2Q sing 114 n n N23 H231 E2Q sing 115 n n # _atom_sites.entry_id 7OCD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 E2Q A 1 901 901 E2Q E2Q . H 5 PC1 A 1 902 1001 PC1 PC1 . I 5 PC1 A 1 903 1101 PC1 PC1 . J 4 E2Q C 1 901 901 E2Q E2Q . K 5 PC1 C 1 902 1001 PC1 PC1 . L 5 PC1 C 1 903 1101 PC1 PC1 . M 4 E2Q D 1 901 901 E2Q E2Q . N 5 PC1 D 1 902 1201 PC1 PC1 . O 4 E2Q B 1 901 901 E2Q E2Q . P 5 PC1 B 1 902 1201 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 E2Q . . . J 4 144.094 172.2 195.125 1 52.49 ? C01 E2Q 901 C 1 HETATM 2 C C02 E2Q . . . J 4 143.815 171.362 196.148 1 52.49 ? C02 E2Q 901 C 1 HETATM 3 C C03 E2Q . . . J 4 142.973 170.248 195.92 1 52.49 ? C03 E2Q 901 C 1 HETATM 4 C C04 E2Q . . . J 4 142.689 169.373 197.008 1 52.49 ? C04 E2Q 901 C 1 HETATM 5 C C05 E2Q . . . J 4 141.877 168.282 196.812 1 52.49 ? C05 E2Q 901 C 1 HETATM 6 C C06 E2Q . . . J 4 141.318 168.021 195.562 1 52.49 ? C06 E2Q 901 C 1 HETATM 7 C C07 E2Q . . . J 4 141.595 168.858 194.532 1 52.49 ? C07 E2Q 901 C 1 HETATM 8 C C08 E2Q . . . J 4 142.426 170.009 194.644 1 52.49 ? C08 E2Q 901 C 1 HETATM 9 C C09 E2Q . . . J 4 142.729 170.903 193.563 1 52.49 ? C09 E2Q 901 C 1 HETATM 10 C C10 E2Q . . . J 4 143.55 171.958 193.861 1 52.49 ? C10 E2Q 901 C 1 HETATM 11 C C19 E2Q . . . J 4 142.075 167.585 199.116 1 52.49 ? C19 E2Q 901 C 1 HETATM 12 C C21 E2Q . . . J 4 142.959 168.756 199.353 1 52.49 ? C21 E2Q 901 C 1 HETATM 13 N N14 E2Q . . . J 4 140.561 170.775 192.029 1 52.49 ? N14 E2Q 901 C 1 HETATM 14 N N15 E2Q . . . J 4 140.898 168.383 193.304 1 52.49 ? N15 E2Q 901 C 1 HETATM 15 N N18 E2Q . . . J 4 141.569 167.409 197.834 1 52.49 ? N18 E2Q 901 C 1 HETATM 16 N N23 E2Q . . . J 4 143.22 169.597 198.267 1 52.49 ? N23 E2Q 901 C 1 HETATM 17 O O12 E2Q . . . J 4 142.523 171.934 191.285 1 52.49 ? O12 E2Q 901 C 1 HETATM 18 O O13 E2Q . . . J 4 142.498 169.454 191.533 1 52.49 ? O13 E2Q 901 C 1 HETATM 19 O O16 E2Q . . . J 4 139.899 169.004 193.021 1 52.49 ? O16 E2Q 901 C 1 HETATM 20 O O17 E2Q . . . J 4 141.346 167.46 192.708 1 52.49 ? O17 E2Q 901 C 1 HETATM 21 O O20 E2Q . . . J 4 141.793 166.802 199.995 1 52.49 ? O20 E2Q 901 C 1 HETATM 22 O O22 E2Q . . . J 4 143.451 169.001 200.431 1 52.49 ? O22 E2Q 901 C 1 HETATM 23 S S11 E2Q . . . J 4 142.155 170.756 191.976 1 52.49 ? S11 E2Q 901 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #