data_7OCD # _model_server_result.job_id cx51zhIzLSW-h4fBr3iExg _model_server_result.datetime_utc '2024-10-19 20:19:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ocd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":902}' # _entry.id 7OCD # _exptl.entry_id 7OCD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 790.145 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OCD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 H N N ? 5 I N N ? 5 K N N ? 5 L N N ? 5 N N N ? 5 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 740 A CYS 714 1_555 A SG CYS 795 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 740 C CYS 714 1_555 B SG CYS 795 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 C SG CYS 739 D CYS 718 1_555 C SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 D SG CYS 52 I CYS 52 1_555 D SG CYS 91 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf5 D SG CYS 90 I CYS 90 1_555 D SG CYS 100 I CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 E SG CYS 52 J CYS 52 1_555 E SG CYS 91 J CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 E SG CYS 90 J CYS 90 1_555 E SG CYS 100 J CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf8 F SG CYS 739 B CYS 718 1_555 F SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C44 H88 N O8 P' _chem_comp.formula_weight 790.145 _chem_comp.id PC1 _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLCHOLINE # _atom_sites.entry_id 7OCD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 E2Q A 1 901 901 E2Q E2Q . H 5 PC1 A 1 902 1001 PC1 PC1 . I 5 PC1 A 1 903 1101 PC1 PC1 . J 4 E2Q C 1 901 901 E2Q E2Q . K 5 PC1 C 1 902 1001 PC1 PC1 . L 5 PC1 C 1 903 1101 PC1 PC1 . M 4 E2Q D 1 901 901 E2Q E2Q . N 5 PC1 D 1 902 1201 PC1 PC1 . O 4 E2Q B 1 901 901 E2Q E2Q . P 5 PC1 B 1 902 1201 PC1 PC1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 PC1 . . . H 5 191.819 157.961 145.869 1 43.08 ? O21 PC1 902 A 1 HETATM 2 C C21 PC1 . . . H 5 192.092 159.294 146.188 1 43.08 ? C21 PC1 902 A 1 HETATM 3 O O22 PC1 . . . H 5 192.42 159.584 147.288 1 43.08 ? O22 PC1 902 A 1 HETATM 4 C C22 PC1 . . . H 5 191.971 160.374 145.117 1 43.08 ? C22 PC1 902 A 1 HETATM 5 C C23 PC1 . . . H 5 191.105 159.87 143.964 1 43.08 ? C23 PC1 902 A 1 HETATM 6 C C24 PC1 . . . H 5 191 160.961 142.902 1 43.08 ? C24 PC1 902 A 1 HETATM 7 C C25 PC1 . . . H 5 190.164 160.474 141.72 1 43.08 ? C25 PC1 902 A 1 HETATM 8 C C26 PC1 . . . H 5 189.705 161.663 140.88 1 43.08 ? C26 PC1 902 A 1 HETATM 9 C C27 PC1 . . . H 5 189.177 161.177 139.532 1 43.08 ? C27 PC1 902 A 1 HETATM 10 C C28 PC1 . . . H 5 188.565 162.346 138.76 1 43.08 ? C28 PC1 902 A 1 HETATM 11 C C29 PC1 . . . H 5 187.463 161.83 137.837 1 43.08 ? C29 PC1 902 A 1 HETATM 12 C C2A PC1 . . . H 5 186.901 162.985 137.011 1 43.08 ? C2A PC1 902 A 1 HETATM 13 C C2B PC1 . . . H 5 187.716 163.161 135.737 1 43.08 ? C2B PC1 902 A 1 HETATM 14 C C2C PC1 . . . H 5 186.851 162.846 134.523 1 43.08 ? C2C PC1 902 A 1 HETATM 15 C C2D PC1 . . . H 5 187.756 162.55 133.33 1 43.08 ? C2D PC1 902 A 1 HETATM 16 C C2E PC1 . . . H 5 186.917 162.171 132.112 1 43.08 ? C2E PC1 902 A 1 HETATM 17 C C2F PC1 . . . H 5 187.793 162.258 130.865 1 43.08 ? C2F PC1 902 A 1 HETATM 18 C C2G PC1 . . . H 5 186.943 162.173 129.6 1 43.08 ? C2G PC1 902 A 1 HETATM 19 C C2H PC1 . . . H 5 186.655 160.716 129.261 1 43.08 ? C2H PC1 902 A 1 HETATM 20 C C2I PC1 . . . H 5 185.982 160.646 127.894 1 43.08 ? C2I PC1 902 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 20 #