data_7OCF
#
_model_server_result.job_id            Rlpk4BIV9_j0SiRF9RVX_A 
_model_server_result.datetime_utc      '2025-10-01 07:52:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ocf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"MA","auth_seq_id":1403}' 
#
_entry.id    7OCF 
#
_exptl.entry_id    7OCF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              790.145 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    26 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OCF 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OCF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 J N N 
? 6 K N N 
? 6 L N N 
? 6 M N N 
? 6 N N N 
? 6 O N N 
? 6 R N N 
? 6 S N N 
? 6 T N N 
? 6 U N N 
? 6 V N N 
? 6 X N N 
? 6 Y N N 
? 6 AA N N 
? 6 BA N N 
? 6 CA N N 
? 6 DA N N 
? 6 EA N N 
? 6 FA N N 
? 6 HA N N 
? 6 IA N N 
? 6 JA N N 
? 6 LA N N 
? 6 MA N N 
? 6 NA N N 
? 6 OA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 740 A CYS 714 1_555 A SG CYS 795 A CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 B SG CYS 739 B CYS 718 1_555 B SG CYS 794 B CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 D SG CYS 52 I CYS 52 1_555 D SG CYS 91 I CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf4 D SG CYS 90 I CYS 90 1_555 D SG CYS 100 I CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf5 E SG CYS 740 C CYS 714 1_555 E SG CYS 795 C CYS 769 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 G SG CYS 52 J CYS 52 1_555 G SG CYS 91 J CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf7 G SG CYS 90 J CYS 90 1_555 G SG CYS 100 J CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf8 H SG CYS 739 D CYS 718 1_555 H SG CYS 794 D CYS 773 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C44 H88 N O8 P' 
_chem_comp.formula_weight    790.145 
_chem_comp.id                PC1 
_chem_comp.mon_nstd_flag     ? 
_chem_comp.name              1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-SN-PHOSPHATIDYLCHOLINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O12 P PC1 sing 278 n n 
P O14 PC1 doub 279 n n 
P O13 PC1 sing 280 n n 
P O11 PC1 sing 281 n n 
O13 C11 PC1 sing 282 n n 
C11 C12 PC1 sing 283 n n 
C11 H111 PC1 sing 284 n n 
C11 H112 PC1 sing 285 n n 
C12 N PC1 sing 286 n n 
C12 H121 PC1 sing 287 n n 
C12 H122 PC1 sing 288 n n 
N C13 PC1 sing 289 n n 
N C14 PC1 sing 290 n n 
N C15 PC1 sing 291 n n 
C13 H131 PC1 sing 292 n n 
C13 H132 PC1 sing 293 n n 
C13 H133 PC1 sing 294 n n 
C14 H141 PC1 sing 295 n n 
C14 H142 PC1 sing 296 n n 
C14 H143 PC1 sing 297 n n 
C15 H151 PC1 sing 298 n n 
C15 H152 PC1 sing 299 n n 
C15 H153 PC1 sing 300 n n 
O11 C1 PC1 sing 301 n n 
C1 C2 PC1 sing 302 n n 
C1 H11 PC1 sing 303 n n 
C1 H12 PC1 sing 304 n n 
C2 O21 PC1 sing 305 n n 
C2 C3 PC1 sing 306 n n 
C2 H2 PC1 sing 307 n n 
O21 C21 PC1 sing 308 n n 
C21 O22 PC1 doub 309 n n 
C21 C22 PC1 sing 310 n n 
C22 C23 PC1 sing 311 n n 
C22 H221 PC1 sing 312 n n 
C22 H222 PC1 sing 313 n n 
C23 C24 PC1 sing 314 n n 
C23 H231 PC1 sing 315 n n 
C23 H232 PC1 sing 316 n n 
C24 C25 PC1 sing 317 n n 
C24 H241 PC1 sing 318 n n 
C24 H242 PC1 sing 319 n n 
C25 C26 PC1 sing 320 n n 
C25 H251 PC1 sing 321 n n 
C25 H252 PC1 sing 322 n n 
C26 C27 PC1 sing 323 n n 
C26 H261 PC1 sing 324 n n 
C26 H262 PC1 sing 325 n n 
C27 C28 PC1 sing 326 n n 
C27 H271 PC1 sing 327 n n 
C27 H272 PC1 sing 328 n n 
C28 C29 PC1 sing 329 n n 
C28 H281 PC1 sing 330 n n 
C28 H282 PC1 sing 331 n n 
C29 C2A PC1 sing 332 n n 
C29 H291 PC1 sing 333 n n 
C29 H292 PC1 sing 334 n n 
C2A C2B PC1 sing 335 n n 
C2A H2A1 PC1 sing 336 n n 
C2A H2A2 PC1 sing 337 n n 
C2B C2C PC1 sing 338 n n 
C2B H2B1 PC1 sing 339 n n 
C2B H2B2 PC1 sing 340 n n 
C2C C2D PC1 sing 341 n n 
C2C H2C1 PC1 sing 342 n n 
C2C H2C2 PC1 sing 343 n n 
C2D C2E PC1 sing 344 n n 
C2D H2D1 PC1 sing 345 n n 
C2D H2D2 PC1 sing 346 n n 
C2E C2F PC1 sing 347 n n 
C2E H2E1 PC1 sing 348 n n 
C2E H2E2 PC1 sing 349 n n 
C2F C2G PC1 sing 350 n n 
C2F H2F1 PC1 sing 351 n n 
C2F H2F2 PC1 sing 352 n n 
C2G C2H PC1 sing 353 n n 
C2G H2G1 PC1 sing 354 n n 
C2G H2G2 PC1 sing 355 n n 
C2H C2I PC1 sing 356 n n 
C2H H2H1 PC1 sing 357 n n 
C2H H2H2 PC1 sing 358 n n 
C2I H2I1 PC1 sing 359 n n 
C2I H2I2 PC1 sing 360 n n 
C2I H2I3 PC1 sing 361 n n 
C3 O31 PC1 sing 362 n n 
C3 H31 PC1 sing 363 n n 
C3 H32 PC1 sing 364 n n 
O31 C31 PC1 sing 365 n n 
C31 O32 PC1 doub 366 n n 
C31 C32 PC1 sing 367 n n 
C32 C33 PC1 sing 368 n n 
C32 H321 PC1 sing 369 n n 
C32 H322 PC1 sing 370 n n 
C33 C34 PC1 sing 371 n n 
C33 H331 PC1 sing 372 n n 
C33 H332 PC1 sing 373 n n 
C34 C35 PC1 sing 374 n n 
C34 H341 PC1 sing 375 n n 
C34 H342 PC1 sing 376 n n 
C35 C36 PC1 sing 377 n n 
C35 H351 PC1 sing 378 n n 
C35 H352 PC1 sing 379 n n 
C36 C37 PC1 sing 380 n n 
C36 H361 PC1 sing 381 n n 
C36 H362 PC1 sing 382 n n 
C37 C38 PC1 sing 383 n n 
C37 H371 PC1 sing 384 n n 
C37 H372 PC1 sing 385 n n 
C38 C39 PC1 sing 386 n n 
C38 H381 PC1 sing 387 n n 
C38 H382 PC1 sing 388 n n 
C39 C3A PC1 sing 389 n n 
C39 H391 PC1 sing 390 n n 
C39 H392 PC1 sing 391 n n 
C3A C3B PC1 sing 392 n n 
C3A H3A1 PC1 sing 393 n n 
C3A H3A2 PC1 sing 394 n n 
C3B C3C PC1 sing 395 n n 
C3B H3B1 PC1 sing 396 n n 
C3B H3B2 PC1 sing 397 n n 
C3C C3D PC1 sing 398 n n 
C3C H3C1 PC1 sing 399 n n 
C3C H3C2 PC1 sing 400 n n 
C3D C3E PC1 sing 401 n n 
C3D H3D1 PC1 sing 402 n n 
C3D H3D2 PC1 sing 403 n n 
C3E C3F PC1 sing 404 n n 
C3E H3E1 PC1 sing 405 n n 
C3E H3E2 PC1 sing 406 n n 
C3F C3G PC1 sing 407 n n 
C3F H3F1 PC1 sing 408 n n 
C3F H3F2 PC1 sing 409 n n 
C3G C3H PC1 sing 410 n n 
C3G H3G1 PC1 sing 411 n n 
C3G H3G2 PC1 sing 412 n n 
C3H C3I PC1 sing 413 n n 
C3H H3H1 PC1 sing 414 n n 
C3H H3H2 PC1 sing 415 n n 
C3I H3I1 PC1 sing 416 n n 
C3I H3I2 PC1 sing 417 n n 
C3I H3I3 PC1 sing 418 n n 
#
_atom_sites.entry_id                     7OCF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 CYZ A 1 1401 1331 CYZ CYZ ? 
J 6 PC1 A 1 1402 1401 PC1 PC1 ? 
K 6 PC1 A 1 1403 1501 PC1 PC1 ? 
L 6 PC1 A 1 1404 1601 PC1 PC1 ? 
M 6 PC1 A 1 1405 1701 PC1 PC1 ? 
N 6 PC1 A 1 1406 1801 PC1 PC1 ? 
O 6 PC1 A 1 1407 2001 PC1 PC1 ? 
P 7 GLU A 1 1408 1327 GLU GLU ? 
Q 5 CYZ B 1 1401 1331 CYZ CYZ ? 
R 6 PC1 B 1 1402 1501 PC1 PC1 ? 
S 6 PC1 B 1 1403 1601 PC1 PC1 ? 
T 6 PC1 B 1 1404 1701 PC1 PC1 ? 
U 6 PC1 B 1 1405 1901 PC1 PC1 ? 
V 6 PC1 B 1 1406 2001 PC1 PC1 ? 
W 7 GLU B 1 1407 1327 GLU GLU ? 
X 6 PC1 I 1 1801 1801 PC1 PC1 ? 
Y 6 PC1 I 1 1802 1901 PC1 PC1 ? 
Z 5 CYZ C 1 1401 1331 CYZ CYZ ? 
AA 6 PC1 C 1 1402 1401 PC1 PC1 ? 
BA 6 PC1 C 1 1403 1501 PC1 PC1 ? 
CA 6 PC1 C 1 1404 1601 PC1 PC1 ? 
DA 6 PC1 C 1 1405 1701 PC1 PC1 ? 
EA 6 PC1 C 1 1406 1801 PC1 PC1 ? 
FA 6 PC1 C 1 1407 2001 PC1 PC1 ? 
GA 7 GLU C 1 1408 1327 GLU GLU ? 
HA 6 PC1 E 1 1901 1901 PC1 PC1 ? 
IA 6 PC1 J 1 1901 1901 PC1 PC1 ? 
JA 6 PC1 J 1 1902 1801 PC1 PC1 ? 
KA 5 CYZ D 1 1401 1331 CYZ CYZ ? 
LA 6 PC1 D 1 1402 1501 PC1 PC1 ? 
MA 6 PC1 D 1 1403 1601 PC1 PC1 ? 
NA 6 PC1 D 1 1404 1701 PC1 PC1 ? 
OA 6 PC1 D 1 1405 2001 PC1 PC1 ? 
PA 7 GLU D 1 1406 1327 GLU GLU ? 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O21 PC1 . . . MA 6 150.781 150.228 157.372 1 19.13 ? O21 PC1 1403 D 1 
HETATM 2 C C21 PC1 . . . MA 6 149.389 150.149 157.446 1 19.13 ? C21 PC1 1403 D 1 
HETATM 3 O O22 PC1 . . . MA 6 148.868 149.854 158.468 1 19.13 ? O22 PC1 1403 D 1 
HETATM 4 C C22 PC1 . . . MA 6 148.539 150.447 156.215 1 19.13 ? C22 PC1 1403 D 1 
HETATM 5 C C23 PC1 . . . MA 6 149.441 150.809 155.041 1 19.13 ? C23 PC1 1403 D 1 
HETATM 6 C C24 PC1 . . . MA 6 148.602 151.417 153.926 1 19.13 ? C24 PC1 1403 D 1 
HETATM 7 C C25 PC1 . . . MA 6 149.51 152.089 152.905 1 19.13 ? C25 PC1 1403 D 1 
HETATM 8 C C26 PC1 . . . MA 6 150.031 151.057 151.918 1 19.13 ? C26 PC1 1403 D 1 
HETATM 9 C C27 PC1 . . . MA 6 148.953 150.707 150.894 1 19.13 ? C27 PC1 1403 D 1 
HETATM 10 C C28 PC1 . . . MA 6 149.539 150.751 149.482 1 19.13 ? C28 PC1 1403 D 1 
HETATM 11 C C29 PC1 . . . MA 6 149.064 149.573 148.627 1 19.13 ? C29 PC1 1403 D 1 
HETATM 12 C C2A PC1 . . . MA 6 150.27 148.783 148.115 1 19.13 ? C2A PC1 1403 D 1 
HETATM 13 C C2B PC1 . . . MA 6 149.913 148.075 146.813 1 19.13 ? C2B PC1 1403 D 1 
HETATM 14 C C2C PC1 . . . MA 6 149.993 149.08 145.666 1 19.13 ? C2C PC1 1403 D 1 
HETATM 15 C C2D PC1 . . . MA 6 149.676 148.384 144.345 1 19.13 ? C2D PC1 1403 D 1 
HETATM 16 C C2E PC1 . . . MA 6 149.323 149.426 143.287 1 19.13 ? C2E PC1 1403 D 1 
HETATM 17 C C2F PC1 . . . MA 6 148.758 148.737 142.053 1 19.13 ? C2F PC1 1403 D 1 
HETATM 18 C C2G PC1 . . . MA 6 148.112 149.766 141.142 1 19.13 ? C2G PC1 1403 D 1 
HETATM 19 C C2H PC1 . . . MA 6 147.009 149.115 140.321 1 19.13 ? C2H PC1 1403 D 1 
HETATM 20 C C2I PC1 . . . MA 6 147.529 147.85 139.651 1 19.13 ? C2I PC1 1403 D 1 
#
_model_server_stats.io_time_ms              39 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           199 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#