data_7OCI
#
_model_server_result.job_id            HLsODZ3nSJ52V9f2sefBFQ 
_model_server_result.datetime_utc      '2025-02-26 08:17:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7oci 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":201}' 
#
_entry.id    7OCI 
#
_exptl.entry_id    7OCI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              744.034 
_entity.id                          12 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OCI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OCI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    nonameric 
_pdbx_struct_assembly.oligomeric_count      9 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 12 L N N 
? 12 N N N 
? 12 P N N 
? 12 Q N N 
? 12 T N N 
? 12 X N N 
#
loop_
_pdbx_entity_branch.entity_id
_pdbx_entity_branch.type
10 oligosaccharide 
11 oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 10 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
2 ? 11 2 1 NAG NAG C1 O1 . O4 HO4 . sing 
3 ? 11 3 2 BMA NAG C1 O1 . O4 HO4 . sing 
4 ? 11 4 3 MAN BMA C1 O1 . O3 HO3 . sing 
5 ? 11 5 4 MAN MAN C1 O1 . O2 HO2 . sing 
6 ? 11 6 5 MAN MAN C1 O1 . O2 HO2 . sing 
7 ? 11 7 3 MAN BMA C1 O1 . O6 HO6 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
10 n J NAG 1 K 1 NAG A 506 NAG 
10 n J NAG 2 K 2 NAG A 507 NAG 
11 n K NAG 1 J 1 NAG F 1802 NAG 
11 n K NAG 2 J 2 NAG F 1803 NAG 
11 n K BMA 3 J 3 BMA F 1804 BMA 
11 n K MAN 4 J 4 MAN F 1806 MAN 
11 n K MAN 5 J 5 MAN F 1807 MAN 
11 n K MAN 6 J 6 MAN F 1808 MAN 
11 n K MAN 7 J 7 MAN F 1805 MAN 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A ND2 ASN 336 A ASN 336 1_555 J C1 NAG . K NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale2 A ND2 ASN 400 A ASN 400 1_555 M C1 NAG . A NAG 1302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale3 F ND2 ASN 539 F ASN 539 1_555 K C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale4 G ND2 ASN 60 G ASN 60 1_555 W C1 NAG . G NAG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale5 G ND2 ASN 332 G ASN 332 1_555 V C1 NAG . G NAG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? 
covale ? covale6 J O4 NAG . K NAG 1 1_555 J C1 NAG . K NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.437 ? 
covale ? covale7 K O4 NAG . J NAG 1 1_555 K C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale8 K O4 NAG . J NAG 2 1_555 K C1 BMA . J BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
covale ? covale9 K O3 BMA . J BMA 3 1_555 K C1 MAN . J MAN 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale10 K O6 BMA . J BMA 3 1_555 K C1 MAN . J MAN 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale11 K O2 MAN . J MAN 4 1_555 K C1 MAN . J MAN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? 
covale ? covale12 K O2 MAN . J MAN 5 1_555 K C1 MAN . J MAN 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
metalc ? metalc1 F OD2 ASP 47 F ASP 47 1_555 S MG MG . F MG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.935 ? 
metalc ? metalc2 S MG MG . F MG 901 1_555 U O59 V8K . F V8K 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.834 ? 
#
_chem_comp.formula           'C41 H78 N O8 P' 
_chem_comp.formula_weight    744.034 
_chem_comp.id                PEE 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              1,2-dioleoyl-sn-glycero-3-phosphoethanolamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     DOPE 
#
_atom_sites.entry_id                     7OCI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
L 12 PEE A 1 1301 1301 PEE PEE . 
M 13 NAG A 1 1302 509 NAG NAG . 
N 12 PEE B 1 201 201 PEE PEE . 
O 14 AJP B 1 202 301 AJP AJP . 
P 12 PEE C 1 1801 1801 PEE PEE . 
Q 12 PEE D 1 101 101 PEE PEE . 
R 14 AJP D 1 102 301 AJP AJP . 
S 15 MG F 1 901 901 MG MG . 
T 12 PEE F 1 902 1201 PEE PEE . 
U 16 V8K F 1 903 1901 V8K LIG . 
V 13 NAG G 1 501 418 NAG NAG . 
W 13 NAG G 1 502 419 NAG NAG . 
X 12 PEE H 1 1101 1101 PEE PEE . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C19 PEE . . . N 12 139.944 152.952 189.347 1 65.98 ? C19 PEE 201 B 1 
HETATM 2 C C18 PEE . . . N 12 140.336 152.651 187.876 1 65.98 ? C18 PEE 201 B 1 
HETATM 3 C C17 PEE . . . N 12 139.186 151.876 187.183 1 65.98 ? C17 PEE 201 B 1 
HETATM 4 C C16 PEE . . . N 12 139.621 151.476 185.745 1 65.98 ? C16 PEE 201 B 1 
HETATM 5 C C15 PEE . . . N 12 138.421 150.829 185.003 1 65.98 ? C15 PEE 201 B 1 
HETATM 6 C C14 PEE . . . N 12 138.092 151.678 183.735 1 65.98 ? C14 PEE 201 B 1 
HETATM 7 C C13 PEE . . . N 12 136.741 151.206 183.123 1 65.98 ? C13 PEE 201 B 1 
HETATM 8 C C12 PEE . . . N 12 136.336 152.177 181.96 1 65.98 ? C12 PEE 201 B 1 
HETATM 9 C C11 PEE . . . N 12 135.059 151.705 181.207 1 65.98 ? C11 PEE 201 B 1 
HETATM 10 C C10 PEE . . . N 12 133.762 151.65 182.099 1 65.98 ? C10 PEE 201 B 1 
HETATM 11 O O4 PEE . . . N 12 133.805 151.758 183.279 1 65.98 ? O4 PEE 201 B 1 
HETATM 12 O O2 PEE . . . N 12 132.492 151.427 181.471 1 65.98 ? O2 PEE 201 B 1 
HETATM 13 C C2 PEE . . . N 12 131.405 151.347 182.381 1 65.98 ? C2 PEE 201 B 1 
HETATM 14 C C1 PEE . . . N 12 130.162 151.897 181.726 1 65.98 ? C1 PEE 201 B 1 
HETATM 15 O O3P PEE . . . N 12 130.151 151.58 180.35 1 65.98 ? O3P PEE 201 B 1 
HETATM 16 P P PEE . . . N 12 128.781 151.937 179.479 1 65.98 ? P PEE 201 B 1 
HETATM 17 O O2P PEE . . . N 12 128.596 150.911 178.392 1 65.98 ? O2P PEE 201 B 1 
HETATM 18 O O1P PEE . . . N 12 128.916 153.309 178.86 1 65.98 ? O1P PEE 201 B 1 
HETATM 19 O O4P PEE . . . N 12 127.459 151.916 180.489 1 65.98 ? O4P PEE 201 B 1 
HETATM 20 C C4 PEE . . . N 12 126.169 151.938 179.912 1 65.98 ? C4 PEE 201 B 1 
HETATM 21 C C5 PEE . . . N 12 125.324 153.005 180.597 1 65.98 ? C5 PEE 201 B 1 
HETATM 22 N N PEE . . . N 12 126.168 154.131 180.966 1 65.98 ? N PEE 201 B 1 
HETATM 23 C C3 PEE . . . N 12 131.172 149.877 182.802 1 65.98 ? C3 PEE 201 B 1 
HETATM 24 O O3 PEE . . . N 12 132.446 149.223 182.956 1 65.98 ? O3 PEE 201 B 1 
HETATM 25 C C30 PEE . . . N 12 132.555 148.317 184.062 1 65.98 ? C30 PEE 201 B 1 
HETATM 26 O O5 PEE . . . N 12 131.644 148.16 184.806 1 65.98 ? O5 PEE 201 B 1 
HETATM 27 C C31 PEE . . . N 12 133.884 147.542 184.272 1 65.98 ? C31 PEE 201 B 1 
HETATM 28 C C32 PEE . . . N 12 133.6 146.121 184.839 1 65.98 ? C32 PEE 201 B 1 
HETATM 29 C C33 PEE . . . N 12 134.847 145.214 184.58 1 65.98 ? C33 PEE 201 B 1 
HETATM 30 C C34 PEE . . . N 12 136.12 145.899 185.162 1 65.98 ? C34 PEE 201 B 1 
HETATM 31 C C35 PEE . . . N 12 136.753 144.977 186.247 1 65.98 ? C35 PEE 201 B 1 
HETATM 32 C C36 PEE . . . N 12 138.24 145.368 186.454 1 65.98 ? C36 PEE 201 B 1 
HETATM 33 C C37 PEE . . . N 12 138.557 145.412 187.974 1 65.98 ? C37 PEE 201 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           33 
#