data_7OCN # _model_server_result.job_id 89zM6hOfo6xyJwje6OjXeg _model_server_result.datetime_utc '2024-12-27 02:26:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ocn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":803}' # _entry.id 7OCN # _exptl.entry_id 7OCN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OCN _cell.length_a 99.496 _cell.length_b 157.418 _cell.length_c 219.802 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OCN _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 A ASP 16 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc2 A O ASP 18 A ASP 18 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc3 A OD1 ASP 176 A ASP 176 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc4 A O THR 412 A THR 412 1_555 G MG MG . A MG 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc5 G MG MG . A MG 805 1_555 R O HOH . A HOH 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc6 G MG MG . A MG 805 1_555 R O HOH . A HOH 938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc7 B OD2 ASP 16 B ASP 16 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc8 B O ASP 18 B ASP 18 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.66 ? metalc ? metalc9 B OE2 GLU 175 B GLU 175 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc10 B OD1 ASP 176 B ASP 176 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 92 n n N1 C6 EPE sing 93 n n N1 C9 EPE sing 94 n n C2 C3 EPE sing 95 n n C2 H21 EPE sing 96 n n C2 H22 EPE sing 97 n n C3 N4 EPE sing 98 n n C3 H31 EPE sing 99 n n C3 H32 EPE sing 100 n n N4 C5 EPE sing 101 n n N4 C7 EPE sing 102 n n C5 C6 EPE sing 103 n n C5 H51 EPE sing 104 n n C5 H52 EPE sing 105 n n C6 H61 EPE sing 106 n n C6 H62 EPE sing 107 n n C7 C8 EPE sing 108 n n C7 H71 EPE sing 109 n n C7 H72 EPE sing 110 n n C8 O8 EPE sing 111 n n C8 H81 EPE sing 112 n n C8 H82 EPE sing 113 n n O8 HO8 EPE sing 114 n n C9 C10 EPE sing 115 n n C9 H91 EPE sing 116 n n C9 H92 EPE sing 117 n n C10 S EPE sing 118 n n C10 H101 EPE sing 119 n n C10 H102 EPE sing 120 n n S O1S EPE doub 121 n n S O2S EPE doub 122 n n S O3S EPE sing 123 n n O3S HOS3 EPE sing 124 n n # _atom_sites.entry_id 7OCN _atom_sites.fract_transf_matrix[1][1] 0.010051 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00455 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 801 801 MG MG . D 3 SO4 A 1 802 802 SO4 SO4 . E 4 EDO A 1 803 1301 EDO EDO . F 3 SO4 A 1 804 2 SO4 SO4 . G 2 MG A 1 805 3 MG MG . H 5 CL A 1 806 2 CL CL . I 6 BR A 1 807 1 BR BR . J 4 EDO B 1 801 801 EDO EDO . K 2 MG B 1 802 802 MG MG . L 7 EPE B 1 803 901 EPE EPE . M 3 SO4 B 1 804 1 SO4 SO4 . N 3 SO4 B 1 805 3 SO4 SO4 . O 5 CL B 1 806 3 CL CL . P 5 CL B 1 807 4 CL CL . Q 5 CL B 1 808 5 CL CL . R 8 HOH A 1 901 108 HOH HOH . R 8 HOH A 2 902 34 HOH HOH . R 8 HOH A 3 903 3 HOH HOH . R 8 HOH A 4 904 127 HOH HOH . R 8 HOH A 5 905 42 HOH HOH . R 8 HOH A 6 906 65 HOH HOH . R 8 HOH A 7 907 61 HOH HOH . R 8 HOH A 8 908 115 HOH HOH . R 8 HOH A 9 909 78 HOH HOH . R 8 HOH A 10 910 128 HOH HOH . R 8 HOH A 11 911 16 HOH HOH . R 8 HOH A 12 912 23 HOH HOH . R 8 HOH A 13 913 120 HOH HOH . R 8 HOH A 14 914 118 HOH HOH . R 8 HOH A 15 915 125 HOH HOH . R 8 HOH A 16 916 121 HOH HOH . R 8 HOH A 17 917 21 HOH HOH . R 8 HOH A 18 918 84 HOH HOH . R 8 HOH A 19 919 39 HOH HOH . R 8 HOH A 20 920 31 HOH HOH . R 8 HOH A 21 921 59 HOH HOH . R 8 HOH A 22 922 44 HOH HOH . R 8 HOH A 23 923 132 HOH HOH . R 8 HOH A 24 924 48 HOH HOH . R 8 HOH A 25 925 114 HOH HOH . R 8 HOH A 26 926 56 HOH HOH . R 8 HOH A 27 927 17 HOH HOH . R 8 HOH A 28 928 30 HOH HOH . R 8 HOH A 29 929 110 HOH HOH . R 8 HOH A 30 930 10 HOH HOH . R 8 HOH A 31 931 86 HOH HOH . R 8 HOH A 32 932 77 HOH HOH . R 8 HOH A 33 933 87 HOH HOH . R 8 HOH A 34 934 32 HOH HOH . R 8 HOH A 35 935 129 HOH HOH . R 8 HOH A 36 936 122 HOH HOH . R 8 HOH A 37 937 134 HOH HOH . R 8 HOH A 38 938 19 HOH HOH . R 8 HOH A 39 939 133 HOH HOH . R 8 HOH A 40 940 33 HOH HOH . R 8 HOH A 41 941 80 HOH HOH . R 8 HOH A 42 942 124 HOH HOH . R 8 HOH A 43 943 49 HOH HOH . R 8 HOH A 44 944 126 HOH HOH . R 8 HOH A 45 945 113 HOH HOH . R 8 HOH A 46 946 123 HOH HOH . R 8 HOH A 47 947 9 HOH HOH . R 8 HOH A 48 948 109 HOH HOH . R 8 HOH A 49 949 119 HOH HOH . R 8 HOH A 50 950 112 HOH HOH . R 8 HOH A 51 951 117 HOH HOH . S 8 HOH B 1 901 100 HOH HOH . S 8 HOH B 2 902 52 HOH HOH . S 8 HOH B 3 903 111 HOH HOH . S 8 HOH B 4 904 835 HOH HOH . S 8 HOH B 5 905 130 HOH HOH . S 8 HOH B 6 906 27 HOH HOH . S 8 HOH B 7 907 131 HOH HOH . S 8 HOH B 8 908 50 HOH HOH . S 8 HOH B 9 909 2 HOH HOH . S 8 HOH B 10 910 88 HOH HOH . S 8 HOH B 11 911 75 HOH HOH . S 8 HOH B 12 912 53 HOH HOH . S 8 HOH B 13 913 54 HOH HOH . S 8 HOH B 14 914 51 HOH HOH . S 8 HOH B 15 915 72 HOH HOH . S 8 HOH B 16 916 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . L 7 23.023 23.1 -39.642 1 104.16 ? N1 EPE 803 B 1 HETATM 2 C C2 EPE . . . L 7 21.62 22.835 -39.933 1 105.07 ? C2 EPE 803 B 1 HETATM 3 C C3 EPE . . . L 7 21.014 23.813 -40.933 1 104.89 ? C3 EPE 803 B 1 HETATM 4 N N4 EPE . . . L 7 21.766 23.819 -42.174 1 103.91 ? N4 EPE 803 B 1 HETATM 5 C C5 EPE . . . L 7 23.165 24.151 -41.936 1 102.82 ? C5 EPE 803 B 1 HETATM 6 C C6 EPE . . . L 7 23.825 23.297 -40.849 1 102.98 ? C6 EPE 803 B 1 HETATM 7 C C7 EPE . . . L 7 21.086 24.671 -43.151 1 103.85 ? C7 EPE 803 B 1 HETATM 8 C C8 EPE . . . L 7 21.969 25.107 -44.323 1 102.87 ? C8 EPE 803 B 1 HETATM 9 O O8 EPE . . . L 7 21.21 25.863 -45.224 1 103.64 ? O8 EPE 803 B 1 HETATM 10 C C9 EPE . . . L 7 23.5 22.056 -38.725 1 105.14 ? C9 EPE 803 B 1 HETATM 11 C C10 EPE . . . L 7 25.015 21.804 -38.677 1 105.11 ? C10 EPE 803 B 1 HETATM 12 S S EPE . . . L 7 25.41 20.194 -39.433 1 106.61 ? S EPE 803 B 1 HETATM 13 O O1S EPE . . . L 7 24.694 20.01 -40.747 1 106.61 ? O1S EPE 803 B 1 HETATM 14 O O2S EPE . . . L 7 26.845 20.079 -39.897 1 105.62 ? O2S EPE 803 B 1 HETATM 15 O O3S EPE . . . L 7 25.075 19.09 -38.458 1 107.84 -1 O3S EPE 803 B 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 15 #