data_7OCP # _model_server_result.job_id m1rvKxYKnV7UKJrIN8KY_A _model_server_result.datetime_utc '2024-12-26 18:21:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ocp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1001}' # _entry.id 7OCP # _exptl.entry_id 7OCP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OCP _cell.length_a 99.661 _cell.length_b 157.692 _cell.length_c 219.289 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OCP _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 A ASP 16 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc2 A O ASP 18 A ASP 18 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc3 A OD1 ASP 176 A ASP 176 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc4 B OD2 ASP 16 B ASP 16 1_555 L MG MG . B MG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc5 B O ASP 18 B ASP 18 1_555 L MG MG . B MG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc6 B OD1 ASP 176 B ASP 176 1_555 L MG MG . B MG 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 92 n n N1 C6 EPE sing 93 n n N1 C9 EPE sing 94 n n C2 C3 EPE sing 95 n n C2 H21 EPE sing 96 n n C2 H22 EPE sing 97 n n C3 N4 EPE sing 98 n n C3 H31 EPE sing 99 n n C3 H32 EPE sing 100 n n N4 C5 EPE sing 101 n n N4 C7 EPE sing 102 n n C5 C6 EPE sing 103 n n C5 H51 EPE sing 104 n n C5 H52 EPE sing 105 n n C6 H61 EPE sing 106 n n C6 H62 EPE sing 107 n n C7 C8 EPE sing 108 n n C7 H71 EPE sing 109 n n C7 H72 EPE sing 110 n n C8 O8 EPE sing 111 n n C8 H81 EPE sing 112 n n C8 H82 EPE sing 113 n n O8 HO8 EPE sing 114 n n C9 C10 EPE sing 115 n n C9 H91 EPE sing 116 n n C9 H92 EPE sing 117 n n C10 S EPE sing 118 n n C10 H101 EPE sing 119 n n C10 H102 EPE sing 120 n n S O1S EPE doub 121 n n S O2S EPE doub 122 n n S O3S EPE sing 123 n n O3S HOS3 EPE sing 124 n n # _atom_sites.entry_id 7OCP _atom_sites.fract_transf_matrix[1][1] 0.010034 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006341 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00456 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 801 801 EDO EDO . D 3 MG A 1 802 802 MG MG . E 4 SO4 A 1 803 803 SO4 SO4 . F 5 NDP A 1 804 901 NDP NDP . G 4 SO4 A 1 805 902 SO4 SO4 . H 6 CL A 1 806 1 CL CL . I 7 EPE B 1 1001 1001 EPE EPE . J 5 NDP B 1 1002 701 NDP NDP . K 4 SO4 B 1 1003 702 SO4 SO4 . L 3 MG B 1 1004 801 MG MG . M 6 CL B 1 1005 2 CL CL . N 8 HOH A 1 901 25 HOH HOH . N 8 HOH A 2 902 38 HOH HOH . N 8 HOH A 3 903 24 HOH HOH . N 8 HOH A 4 904 15 HOH HOH . N 8 HOH A 5 905 2 HOH HOH . N 8 HOH A 6 906 13 HOH HOH . N 8 HOH A 7 907 19 HOH HOH . N 8 HOH A 8 908 14 HOH HOH . N 8 HOH A 9 909 8 HOH HOH . N 8 HOH A 10 910 4 HOH HOH . N 8 HOH A 11 911 9 HOH HOH . N 8 HOH A 12 912 16 HOH HOH . N 8 HOH A 13 913 23 HOH HOH . N 8 HOH A 14 914 37 HOH HOH . N 8 HOH A 15 915 21 HOH HOH . N 8 HOH A 16 916 17 HOH HOH . N 8 HOH A 17 917 6 HOH HOH . N 8 HOH A 18 918 5 HOH HOH . N 8 HOH A 19 919 12 HOH HOH . N 8 HOH A 20 920 3 HOH HOH . N 8 HOH A 21 921 34 HOH HOH . N 8 HOH A 22 922 11 HOH HOH . N 8 HOH A 23 923 33 HOH HOH . N 8 HOH A 24 924 39 HOH HOH . N 8 HOH A 25 925 35 HOH HOH . N 8 HOH A 26 926 20 HOH HOH . O 8 HOH B 1 1101 28 HOH HOH . O 8 HOH B 2 1102 31 HOH HOH . O 8 HOH B 3 1103 26 HOH HOH . O 8 HOH B 4 1104 22 HOH HOH . O 8 HOH B 5 1105 30 HOH HOH . O 8 HOH B 6 1106 27 HOH HOH . O 8 HOH B 7 1107 18 HOH HOH . O 8 HOH B 8 1108 32 HOH HOH . O 8 HOH B 9 1109 36 HOH HOH . O 8 HOH B 10 1110 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . I 7 22.894 23.321 -39.563 0.8 93.56 ? N1 EPE 1001 B 1 HETATM 2 C C2 EPE . . . I 7 21.451 23.218 -39.764 0.8 94.68 ? C2 EPE 1001 B 1 HETATM 3 C C3 EPE . . . I 7 20.894 24.112 -40.869 0.8 95.28 ? C3 EPE 1001 B 1 HETATM 4 N N4 EPE . . . I 7 21.656 24.002 -42.1 0.8 93.55 ? N4 EPE 1001 B 1 HETATM 5 C C5 EPE . . . I 7 23.062 24.285 -41.863 0.8 92.28 ? C5 EPE 1001 B 1 HETATM 6 C C6 EPE . . . I 7 23.641 23.336 -40.817 0.8 91.74 ? C6 EPE 1001 B 1 HETATM 7 C C7 EPE . . . I 7 21.004 24.73 -43.194 0.8 94.27 ? C7 EPE 1001 B 1 HETATM 8 C C8 EPE . . . I 7 21.928 25.594 -44.058 0.8 93.47 ? C8 EPE 1001 B 1 HETATM 9 O O8 EPE . . . I 7 21.162 26.279 -45.01 0.8 94.3 ? O8 EPE 1001 B 1 HETATM 10 C C9 EPE . . . I 7 23.281 22.226 -38.669 0.8 94.35 ? C9 EPE 1001 B 1 HETATM 11 C C10 EPE . . . I 7 24.786 22.066 -38.416 0.8 94.13 ? C10 EPE 1001 B 1 HETATM 12 S S EPE . . . I 7 25.402 20.482 -39.054 0.8 93.89 ? S EPE 1001 B 1 HETATM 13 O O1S EPE . . . I 7 26.85 20.333 -39.147 0.8 93.15 ? O1S EPE 1001 B 1 HETATM 14 O O2S EPE . . . I 7 24.676 20.245 -40.266 0.8 94.19 ? O2S EPE 1001 B 1 HETATM 15 O O3S EPE . . . I 7 24.909 19.495 -37.968 0.8 92.93 -1 O3S EPE 1001 B 1 # _model_server_stats.io_time_ms 121 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 28 _model_server_stats.element_count 15 #