data_7OCR # _model_server_result.job_id 81SS45psbt1WejFrqPFNjw _model_server_result.datetime_utc '2024-12-26 12:13:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ocr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":805}' # _entry.id 7OCR # _exptl.entry_id 7OCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OCR _cell.length_a 99.886 _cell.length_b 157.556 _cell.length_c 220.467 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N ? 5 I N N ? 5 J N N ? 5 U N N ? 5 V N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 16 A ASP 16 1_555 P MG MG . A MG 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc2 A O ASP 18 A ASP 18 1_555 P MG MG . A MG 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 A OD1 ASP 176 A ASP 176 1_555 P MG MG . A MG 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? metalc ? metalc4 A OD2 ASP 223 A ASP 223 1_555 Q K K . A K 815 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.401 ? metalc ? metalc5 Q K K . A K 815 1_555 Z O HOH . A HOH 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? metalc ? metalc6 Q K K . A K 815 1_555 Z O HOH . A HOH 917 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc7 Q K K . A K 815 1_555 Z O HOH . A HOH 942 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.787 ? metalc ? metalc8 B OD2 ASP 16 B ASP 16 1_555 Y MG MG . B MG 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc9 B O ASP 18 B ASP 18 1_555 Y MG MG . B MG 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc10 B OD1 ASP 176 B ASP 176 1_555 Y MG MG . B MG 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7OCR _atom_sites.fract_transf_matrix[1][1] 0.010011 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006347 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004536 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 801 2 SO4 SO4 . D 2 SO4 A 1 802 4 SO4 SO4 . E 3 NDP A 1 803 701 NDP NDP . F 4 EPE A 1 804 801 EPE EPE . G 5 EDO A 1 805 901 EDO EDO . H 5 EDO A 1 806 1001 EDO EDO . I 5 EDO A 1 807 1101 EDO EDO . J 5 EDO A 1 808 1201 EDO EDO . K 6 CL A 1 809 2 CL CL . L 6 CL A 1 810 3 CL CL . M 6 CL A 1 811 4 CL CL . N 6 CL A 1 812 5 CL CL . O 4 EPE A 1 813 901 EPE EPE . P 7 MG A 1 814 1 MG MG . Q 8 K A 1 815 1 K K . R 6 CL B 1 801 1 CL CL . S 6 CL B 1 802 6 CL CL . T 6 CL B 1 803 8 CL CL . U 5 EDO B 1 804 1001 EDO EDO . V 5 EDO B 1 805 1201 EDO EDO . W 3 NDP B 1 806 1301 NDP NDP . X 9 F6R B 1 807 1401 F6R F6R . Y 7 MG B 1 808 3 MG MG . Z 10 HOH A 1 901 36 HOH HOH . Z 10 HOH A 2 902 24 HOH HOH . Z 10 HOH A 3 903 47 HOH HOH . Z 10 HOH A 4 904 65 HOH HOH . Z 10 HOH A 5 905 35 HOH HOH . Z 10 HOH A 6 906 83 HOH HOH . Z 10 HOH A 7 907 61 HOH HOH . Z 10 HOH A 8 908 87 HOH HOH . Z 10 HOH A 9 909 111 HOH HOH . Z 10 HOH A 10 910 13 HOH HOH . Z 10 HOH A 11 911 23 HOH HOH . Z 10 HOH A 12 912 71 HOH HOH . Z 10 HOH A 13 913 48 HOH HOH . Z 10 HOH A 14 914 78 HOH HOH . Z 10 HOH A 15 915 10 HOH HOH . Z 10 HOH A 16 916 102 HOH HOH . Z 10 HOH A 17 917 70 HOH HOH . Z 10 HOH A 18 918 17 HOH HOH . Z 10 HOH A 19 919 60 HOH HOH . Z 10 HOH A 20 920 28 HOH HOH . Z 10 HOH A 21 921 73 HOH HOH . Z 10 HOH A 22 922 9 HOH HOH . Z 10 HOH A 23 923 15 HOH HOH . Z 10 HOH A 24 924 27 HOH HOH . Z 10 HOH A 25 925 81 HOH HOH . Z 10 HOH A 26 926 21 HOH HOH . Z 10 HOH A 27 927 93 HOH HOH . Z 10 HOH A 28 928 32 HOH HOH . Z 10 HOH A 29 929 103 HOH HOH . Z 10 HOH A 30 930 12 HOH HOH . Z 10 HOH A 31 931 62 HOH HOH . Z 10 HOH A 32 932 19 HOH HOH . Z 10 HOH A 33 933 68 HOH HOH . Z 10 HOH A 34 934 67 HOH HOH . Z 10 HOH A 35 935 14 HOH HOH . Z 10 HOH A 36 936 30 HOH HOH . Z 10 HOH A 37 937 11 HOH HOH . Z 10 HOH A 38 938 98 HOH HOH . Z 10 HOH A 39 939 50 HOH HOH . Z 10 HOH A 40 940 45 HOH HOH . Z 10 HOH A 41 941 59 HOH HOH . Z 10 HOH A 42 942 25 HOH HOH . Z 10 HOH A 43 943 114 HOH HOH . Z 10 HOH A 44 944 82 HOH HOH . Z 10 HOH A 45 945 39 HOH HOH . Z 10 HOH A 46 946 101 HOH HOH . Z 10 HOH A 47 947 7 HOH HOH . Z 10 HOH A 48 948 97 HOH HOH . Z 10 HOH A 49 949 79 HOH HOH . Z 10 HOH A 50 950 72 HOH HOH . Z 10 HOH A 51 951 49 HOH HOH . Z 10 HOH A 52 952 38 HOH HOH . Z 10 HOH A 53 953 52 HOH HOH . Z 10 HOH A 54 954 77 HOH HOH . Z 10 HOH A 55 955 51 HOH HOH . Z 10 HOH A 56 956 94 HOH HOH . Z 10 HOH A 57 957 112 HOH HOH . Z 10 HOH A 58 958 74 HOH HOH . Z 10 HOH A 59 959 63 HOH HOH . Z 10 HOH A 60 960 34 HOH HOH . Z 10 HOH A 61 961 100 HOH HOH . Z 10 HOH A 62 962 113 HOH HOH . Z 10 HOH A 63 963 66 HOH HOH . Z 10 HOH A 64 964 46 HOH HOH . Z 10 HOH A 65 965 37 HOH HOH . Z 10 HOH A 66 966 64 HOH HOH . Z 10 HOH A 67 967 69 HOH HOH . Z 10 HOH A 68 968 40 HOH HOH . Z 10 HOH A 69 969 92 HOH HOH . Z 10 HOH A 70 970 44 HOH HOH . Z 10 HOH A 71 971 99 HOH HOH . Z 10 HOH A 72 972 43 HOH HOH . AA 10 HOH B 1 901 56 HOH HOH . AA 10 HOH B 2 902 104 HOH HOH . AA 10 HOH B 3 903 116 HOH HOH . AA 10 HOH B 4 904 88 HOH HOH . AA 10 HOH B 5 905 57 HOH HOH . AA 10 HOH B 6 906 42 HOH HOH . AA 10 HOH B 7 907 22 HOH HOH . AA 10 HOH B 8 908 115 HOH HOH . AA 10 HOH B 9 909 55 HOH HOH . AA 10 HOH B 10 910 110 HOH HOH . AA 10 HOH B 11 911 105 HOH HOH . AA 10 HOH B 12 912 84 HOH HOH . AA 10 HOH B 13 913 108 HOH HOH . AA 10 HOH B 14 914 20 HOH HOH . AA 10 HOH B 15 915 18 HOH HOH . AA 10 HOH B 16 916 26 HOH HOH . AA 10 HOH B 17 917 90 HOH HOH . AA 10 HOH B 18 918 6 HOH HOH . AA 10 HOH B 19 919 5 HOH HOH . AA 10 HOH B 20 920 109 HOH HOH . AA 10 HOH B 21 921 16 HOH HOH . AA 10 HOH B 22 922 29 HOH HOH . AA 10 HOH B 23 923 2 HOH HOH . AA 10 HOH B 24 924 33 HOH HOH . AA 10 HOH B 25 925 8 HOH HOH . AA 10 HOH B 26 926 107 HOH HOH . AA 10 HOH B 27 927 58 HOH HOH . AA 10 HOH B 28 928 53 HOH HOH . AA 10 HOH B 29 929 85 HOH HOH . AA 10 HOH B 30 930 95 HOH HOH . AA 10 HOH B 31 931 41 HOH HOH . AA 10 HOH B 32 932 106 HOH HOH . AA 10 HOH B 33 933 86 HOH HOH . AA 10 HOH B 34 934 54 HOH HOH . AA 10 HOH B 35 935 96 HOH HOH . AA 10 HOH B 36 936 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 5 28.321 -11.899 -49.241 1 78.32 ? C1 EDO 805 A 1 HETATM 2 O O1 EDO . . . G 5 28.798 -11.115 -48.165 1 77.07 ? O1 EDO 805 A 1 HETATM 3 C C2 EDO . . . G 5 26.865 -11.737 -49.479 1 78.99 ? C2 EDO 805 A 1 HETATM 4 O O2 EDO . . . G 5 26.525 -11.705 -50.852 1 79.17 ? O2 EDO 805 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 421 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #