data_7OD5 # _model_server_result.job_id fM9TARreYWnsWfrC1xiWjA _model_server_result.datetime_utc '2024-11-21 14:40:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7od5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":407}' # _entry.id 7OD5 # _exptl.entry_id 7OD5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OD5 _cell.length_a 99.984 _cell.length_b 99.984 _cell.length_c 238.124 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OD5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall 'P 4n 2n' _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id S _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7OD5 _atom_sites.fract_transf_matrix[1][1] 0.010002 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010002 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LDA H 1 401 401 LDA LDA . E 5 UNL H 1 402 501 UNL UNL . F 4 LDA H 1 403 702 LDA LDA . G 6 OLC L 1 501 501 OLC OLC . H 5 UNL L 1 502 601 UNL UNL . I 5 UNL L 1 503 701 UNL UNL . J 7 BCL L 1 504 301 BCL BCL . K 7 BCL L 1 505 302 BCL BCL . L 8 BPH L 1 506 402 BPH BPH . M 9 NKP M 1 401 301 NKP NKP . N 9 NKP M 1 402 401 NKP NKP . O 5 UNL M 1 403 501 UNL UNL . P 7 BCL M 1 404 303 BCL BCL . Q 7 BCL M 1 405 304 BCL BCL . R 8 BPH M 1 406 401 BPH BPH . S 10 FE M 1 407 500 FE FE . T 11 U10 M 1 408 501 U10 U10 . U 12 SPN M 1 409 600 SPN SPN . V 4 LDA M 1 410 701 LDA LDA . W 4 LDA M 1 411 709 LDA LDA . X 13 EDO M 1 412 54 EDO EDO . Y 14 HOH H 1 501 223 HOH HOH . Y 14 HOH H 2 502 180 HOH HOH . Y 14 HOH H 3 503 120 HOH HOH . Y 14 HOH H 4 504 143 HOH HOH . Y 14 HOH H 5 505 132 HOH HOH . Y 14 HOH H 6 506 182 HOH HOH . Y 14 HOH H 7 507 214 HOH HOH . Y 14 HOH H 8 508 134 HOH HOH . Y 14 HOH H 9 509 16 HOH HOH . Y 14 HOH H 10 510 150 HOH HOH . Y 14 HOH H 11 511 164 HOH HOH . Y 14 HOH H 12 512 138 HOH HOH . Y 14 HOH H 13 513 112 HOH HOH . Y 14 HOH H 14 514 59 HOH HOH . Y 14 HOH H 15 515 198 HOH HOH . Y 14 HOH H 16 516 221 HOH HOH . Y 14 HOH H 17 517 43 HOH HOH . Y 14 HOH H 18 518 157 HOH HOH . Y 14 HOH H 19 519 33 HOH HOH . Y 14 HOH H 20 520 78 HOH HOH . Y 14 HOH H 21 521 128 HOH HOH . Y 14 HOH H 22 522 99 HOH HOH . Y 14 HOH H 23 523 75 HOH HOH . Y 14 HOH H 24 524 192 HOH HOH . Y 14 HOH H 25 525 183 HOH HOH . Y 14 HOH H 26 526 184 HOH HOH . Y 14 HOH H 27 527 80 HOH HOH . Y 14 HOH H 28 528 116 HOH HOH . Y 14 HOH H 29 529 139 HOH HOH . Y 14 HOH H 30 530 83 HOH HOH . Y 14 HOH H 31 531 30 HOH HOH . Y 14 HOH H 32 532 64 HOH HOH . Y 14 HOH H 33 533 207 HOH HOH . Y 14 HOH H 34 534 216 HOH HOH . Y 14 HOH H 35 535 69 HOH HOH . Y 14 HOH H 36 536 175 HOH HOH . Y 14 HOH H 37 537 107 HOH HOH . Y 14 HOH H 38 538 37 HOH HOH . Y 14 HOH H 39 539 123 HOH HOH . Y 14 HOH H 40 540 9 HOH HOH . Y 14 HOH H 41 541 68 HOH HOH . Y 14 HOH H 42 542 131 HOH HOH . Y 14 HOH H 43 543 113 HOH HOH . Y 14 HOH H 44 544 41 HOH HOH . Y 14 HOH H 45 545 220 HOH HOH . Y 14 HOH H 46 546 177 HOH HOH . Y 14 HOH H 47 547 76 HOH HOH . Y 14 HOH H 48 548 57 HOH HOH . Y 14 HOH H 49 549 19 HOH HOH . Y 14 HOH H 50 550 91 HOH HOH . Y 14 HOH H 51 551 172 HOH HOH . Y 14 HOH H 52 552 56 HOH HOH . Y 14 HOH H 53 553 12 HOH HOH . Y 14 HOH H 54 554 218 HOH HOH . Y 14 HOH H 55 555 196 HOH HOH . Y 14 HOH H 56 556 168 HOH HOH . Y 14 HOH H 57 557 46 HOH HOH . Y 14 HOH H 58 558 97 HOH HOH . Y 14 HOH H 59 559 166 HOH HOH . Y 14 HOH H 60 560 181 HOH HOH . Y 14 HOH H 61 561 85 HOH HOH . Y 14 HOH H 62 562 90 HOH HOH . Y 14 HOH H 63 563 87 HOH HOH . Y 14 HOH H 64 564 110 HOH HOH . Y 14 HOH H 65 565 222 HOH HOH . Y 14 HOH H 66 566 178 HOH HOH . Y 14 HOH H 67 567 213 HOH HOH . Y 14 HOH H 68 568 103 HOH HOH . Y 14 HOH H 69 569 60 HOH HOH . Y 14 HOH H 70 570 54 HOH HOH . Y 14 HOH H 71 571 24 HOH HOH . Y 14 HOH H 72 572 52 HOH HOH . Y 14 HOH H 73 573 101 HOH HOH . Y 14 HOH H 74 574 82 HOH HOH . Y 14 HOH H 75 575 208 HOH HOH . Y 14 HOH H 76 576 173 HOH HOH . Y 14 HOH H 77 577 95 HOH HOH . Y 14 HOH H 78 578 167 HOH HOH . Y 14 HOH H 79 579 141 HOH HOH . Y 14 HOH H 80 580 48 HOH HOH . Y 14 HOH H 81 581 154 HOH HOH . Y 14 HOH H 82 582 125 HOH HOH . Y 14 HOH H 83 583 163 HOH HOH . Y 14 HOH H 84 584 206 HOH HOH . Y 14 HOH H 85 585 140 HOH HOH . Y 14 HOH H 86 586 155 HOH HOH . Y 14 HOH H 87 587 179 HOH HOH . Y 14 HOH H 88 588 215 HOH HOH . Y 14 HOH H 89 589 89 HOH HOH . Y 14 HOH H 90 590 114 HOH HOH . Y 14 HOH H 91 591 203 HOH HOH . Y 14 HOH H 92 592 44 HOH HOH . Y 14 HOH H 93 593 94 HOH HOH . Y 14 HOH H 94 594 145 HOH HOH . Y 14 HOH H 95 595 105 HOH HOH . Y 14 HOH H 96 596 88 HOH HOH . Y 14 HOH H 97 597 135 HOH HOH . Y 14 HOH H 98 598 158 HOH HOH . Y 14 HOH H 99 599 188 HOH HOH . Y 14 HOH H 100 600 174 HOH HOH . Y 14 HOH H 101 601 190 HOH HOH . Z 14 HOH L 1 601 201 HOH HOH . Z 14 HOH L 2 602 171 HOH HOH . Z 14 HOH L 3 603 63 HOH HOH . Z 14 HOH L 4 604 225 HOH HOH . Z 14 HOH L 5 605 160 HOH HOH . Z 14 HOH L 6 606 205 HOH HOH . Z 14 HOH L 7 607 151 HOH HOH . Z 14 HOH L 8 608 98 HOH HOH . Z 14 HOH L 9 609 133 HOH HOH . Z 14 HOH L 10 610 32 HOH HOH . Z 14 HOH L 11 611 1 HOH HOH . Z 14 HOH L 12 612 212 HOH HOH . Z 14 HOH L 13 613 117 HOH HOH . Z 14 HOH L 14 614 6 HOH HOH . Z 14 HOH L 15 615 228 HOH HOH . Z 14 HOH L 16 616 8 HOH HOH . Z 14 HOH L 17 617 176 HOH HOH . Z 14 HOH L 18 618 21 HOH HOH . Z 14 HOH L 19 619 10 HOH HOH . Z 14 HOH L 20 620 61 HOH HOH . Z 14 HOH L 21 621 127 HOH HOH . Z 14 HOH L 22 622 38 HOH HOH . Z 14 HOH L 23 623 2 HOH HOH . Z 14 HOH L 24 624 4 HOH HOH . Z 14 HOH L 25 625 67 HOH HOH . Z 14 HOH L 26 626 193 HOH HOH . Z 14 HOH L 27 627 65 HOH HOH . Z 14 HOH L 28 628 202 HOH HOH . Z 14 HOH L 29 629 31 HOH HOH . Z 14 HOH L 30 630 200 HOH HOH . Z 14 HOH L 31 631 86 HOH HOH . Z 14 HOH L 32 632 197 HOH HOH . Z 14 HOH L 33 633 18 HOH HOH . Z 14 HOH L 34 634 227 HOH HOH . Z 14 HOH L 35 635 20 HOH HOH . Z 14 HOH L 36 636 209 HOH HOH . Z 14 HOH L 37 637 142 HOH HOH . Z 14 HOH L 38 638 62 HOH HOH . Z 14 HOH L 39 639 226 HOH HOH . Z 14 HOH L 40 640 17 HOH HOH . Z 14 HOH L 41 641 70 HOH HOH . Z 14 HOH L 42 642 119 HOH HOH . Z 14 HOH L 43 643 224 HOH HOH . Z 14 HOH L 44 644 15 HOH HOH . Z 14 HOH L 45 645 189 HOH HOH . Z 14 HOH L 46 646 170 HOH HOH . Z 14 HOH L 47 647 3 HOH HOH . Z 14 HOH L 48 648 229 HOH HOH . Z 14 HOH L 49 649 5 HOH HOH . Z 14 HOH L 50 650 92 HOH HOH . Z 14 HOH L 51 651 22 HOH HOH . Z 14 HOH L 52 652 29 HOH HOH . Z 14 HOH L 53 653 185 HOH HOH . Z 14 HOH L 54 654 49 HOH HOH . Z 14 HOH L 55 655 122 HOH HOH . Z 14 HOH L 56 656 74 HOH HOH . Z 14 HOH L 57 657 129 HOH HOH . Z 14 HOH L 58 658 73 HOH HOH . Z 14 HOH L 59 659 152 HOH HOH . Z 14 HOH L 60 660 100 HOH HOH . Z 14 HOH L 61 661 93 HOH HOH . Z 14 HOH L 62 662 130 HOH HOH . Z 14 HOH L 63 663 219 HOH HOH . Z 14 HOH L 64 664 194 HOH HOH . Z 14 HOH L 65 665 136 HOH HOH . AA 14 HOH M 1 501 186 HOH HOH . AA 14 HOH M 2 502 26 HOH HOH . AA 14 HOH M 3 503 121 HOH HOH . AA 14 HOH M 4 504 153 HOH HOH . AA 14 HOH M 5 505 217 HOH HOH . AA 14 HOH M 6 506 58 HOH HOH . AA 14 HOH M 7 507 40 HOH HOH . AA 14 HOH M 8 508 77 HOH HOH . AA 14 HOH M 9 509 81 HOH HOH . AA 14 HOH M 10 510 195 HOH HOH . AA 14 HOH M 11 511 7 HOH HOH . AA 14 HOH M 12 512 210 HOH HOH . AA 14 HOH M 13 513 13 HOH HOH . AA 14 HOH M 14 514 231 HOH HOH . AA 14 HOH M 15 515 79 HOH HOH . AA 14 HOH M 16 516 84 HOH HOH . AA 14 HOH M 17 517 191 HOH HOH . AA 14 HOH M 18 518 72 HOH HOH . AA 14 HOH M 19 519 42 HOH HOH . AA 14 HOH M 20 520 96 HOH HOH . AA 14 HOH M 21 521 23 HOH HOH . AA 14 HOH M 22 522 187 HOH HOH . AA 14 HOH M 23 523 115 HOH HOH . AA 14 HOH M 24 524 36 HOH HOH . AA 14 HOH M 25 525 34 HOH HOH . AA 14 HOH M 26 526 66 HOH HOH . AA 14 HOH M 27 527 169 HOH HOH . AA 14 HOH M 28 528 109 HOH HOH . AA 14 HOH M 29 529 118 HOH HOH . AA 14 HOH M 30 530 230 HOH HOH . AA 14 HOH M 31 531 39 HOH HOH . AA 14 HOH M 32 532 50 HOH HOH . AA 14 HOH M 33 533 55 HOH HOH . AA 14 HOH M 34 534 45 HOH HOH . AA 14 HOH M 35 535 148 HOH HOH . AA 14 HOH M 36 536 104 HOH HOH . AA 14 HOH M 37 537 204 HOH HOH . AA 14 HOH M 38 538 53 HOH HOH . AA 14 HOH M 39 539 11 HOH HOH . AA 14 HOH M 40 540 156 HOH HOH . AA 14 HOH M 41 541 14 HOH HOH . AA 14 HOH M 42 542 144 HOH HOH . AA 14 HOH M 43 543 108 HOH HOH . AA 14 HOH M 44 544 199 HOH HOH . AA 14 HOH M 45 545 124 HOH HOH . AA 14 HOH M 46 546 35 HOH HOH . AA 14 HOH M 47 547 159 HOH HOH . AA 14 HOH M 48 548 126 HOH HOH . AA 14 HOH M 49 549 111 HOH HOH . AA 14 HOH M 50 550 165 HOH HOH . AA 14 HOH M 51 551 51 HOH HOH . AA 14 HOH M 52 552 71 HOH HOH . AA 14 HOH M 53 553 149 HOH HOH . AA 14 HOH M 54 554 162 HOH HOH . AA 14 HOH M 55 555 161 HOH HOH . AA 14 HOH M 56 556 47 HOH HOH . AA 14 HOH M 57 557 28 HOH HOH . AA 14 HOH M 58 558 25 HOH HOH . AA 14 HOH M 59 559 146 HOH HOH . AA 14 HOH M 60 560 27 HOH HOH . AA 14 HOH M 61 561 147 HOH HOH . AA 14 HOH M 62 562 211 HOH HOH . AA 14 HOH M 63 563 102 HOH HOH . AA 14 HOH M 64 564 137 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id S _atom_site.label_entity_id 10 _atom_site.Cartn_x 10.585 _atom_site.Cartn_y -31.529 _atom_site.Cartn_z -41.762 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 407 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #