data_7OER # _model_server_result.job_id iiibh13UZ7gUM-_lo3KK2w _model_server_result.datetime_utc '2025-01-25 11:21:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7OER # _exptl.entry_id 7OER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 417.5 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2,2-diphenylethyl)-1,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]-6-oxidanylidene-pyridine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OER _cell.length_a 72.101 _cell.length_b 52.536 _cell.length_c 32.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OER _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H27 N3 O3' _chem_comp.formula_weight 417.5 _chem_comp.id VBH _chem_comp.mon_nstd_flag . _chem_comp.name N-(2,2-diphenylethyl)-1,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]-6-oxidanylidene-pyridine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-(2,2-diphenylethyl)-1,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)-6-oxo-1,6-dihydropyridine-3-carboxamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 N2 VBH sing 385 n n O2 C22 VBH doub 386 n n O1 C17 VBH doub 387 n n C22 N2 VBH sing 388 n n C22 C20 VBH sing 389 n n N2 C24 VBH sing 390 n n C21 C20 VBH sing 391 n n C20 C19 VBH doub 392 n n C24 C18 VBH doub 393 n n C19 C18 VBH sing 394 n n C18 C17 VBH sing 395 n n C17 N1 VBH sing 396 n n O C1 VBH doub 397 n n C N VBH sing 398 n n N C1 VBH sing 399 n n C1 C2 VBH sing 400 n n N1 C2 VBH sing 401 n n N1 C3 VBH sing 402 n n C3 C4 VBH sing 403 n n C14 C15 VBH doub 404 n y C14 C13 VBH sing 405 n y C15 C16 VBH sing 406 n y C13 C12 VBH doub 407 n y C16 C11 VBH doub 408 n y C12 C11 VBH sing 409 n y C11 C4 VBH sing 410 n n C4 C5 VBH sing 411 n n C10 C5 VBH doub 412 n y C10 C9 VBH sing 413 n y C5 C6 VBH sing 414 n y C9 C8 VBH doub 415 n y C6 C7 VBH doub 416 n y C8 C7 VBH sing 417 n y C4 H1 VBH sing 418 n n C6 H2 VBH sing 419 n n C7 H3 VBH sing 420 n n C8 H4 VBH sing 421 n n C10 H5 VBH sing 422 n n C13 H6 VBH sing 423 n n C15 H7 VBH sing 424 n n C21 H8 VBH sing 425 n n C21 H9 VBH sing 426 n n C21 H10 VBH sing 427 n n C24 H11 VBH sing 428 n n C19 H12 VBH sing 429 n n C23 H13 VBH sing 430 n n C23 H14 VBH sing 431 n n C23 H15 VBH sing 432 n n C2 H16 VBH sing 433 n n C2 H17 VBH sing 434 n n N H18 VBH sing 435 n n C H19 VBH sing 436 n n C H20 VBH sing 437 n n C H21 VBH sing 438 n n C3 H22 VBH sing 439 n n C3 H23 VBH sing 440 n n C16 H24 VBH sing 441 n n C14 H25 VBH sing 442 n n C12 H26 VBH sing 443 n n C9 H27 VBH sing 444 n n # _atom_sites.entry_id 7OER _atom_sites.fract_transf_matrix[1][1] 0.013869 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019035 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031192 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VBH AAA 1 501 4000 VBH LIG . C 3 EDO AAA 1 502 1 EDO EDO . D 4 HOH AAA 1 601 139 HOH HOH . D 4 HOH AAA 2 602 119 HOH HOH . D 4 HOH AAA 3 603 148 HOH HOH . D 4 HOH AAA 4 604 143 HOH HOH . D 4 HOH AAA 5 605 142 HOH HOH . D 4 HOH AAA 6 606 1 HOH HOH . D 4 HOH AAA 7 607 158 HOH HOH . D 4 HOH AAA 8 608 6 HOH HOH . D 4 HOH AAA 9 609 178 HOH HOH . D 4 HOH AAA 10 610 73 HOH HOH . D 4 HOH AAA 11 611 141 HOH HOH . D 4 HOH AAA 12 612 27 HOH HOH . D 4 HOH AAA 13 613 89 HOH HOH . D 4 HOH AAA 14 614 152 HOH HOH . D 4 HOH AAA 15 615 162 HOH HOH . D 4 HOH AAA 16 616 37 HOH HOH . D 4 HOH AAA 17 617 164 HOH HOH . D 4 HOH AAA 18 618 16 HOH HOH . D 4 HOH AAA 19 619 83 HOH HOH . D 4 HOH AAA 20 620 46 HOH HOH . D 4 HOH AAA 21 621 45 HOH HOH . D 4 HOH AAA 22 622 47 HOH HOH . D 4 HOH AAA 23 623 91 HOH HOH . D 4 HOH AAA 24 624 8 HOH HOH . D 4 HOH AAA 25 625 32 HOH HOH . D 4 HOH AAA 26 626 50 HOH HOH . D 4 HOH AAA 27 627 113 HOH HOH . D 4 HOH AAA 28 628 109 HOH HOH . D 4 HOH AAA 29 629 140 HOH HOH . D 4 HOH AAA 30 630 13 HOH HOH . D 4 HOH AAA 31 631 97 HOH HOH . D 4 HOH AAA 32 632 67 HOH HOH . D 4 HOH AAA 33 633 145 HOH HOH . D 4 HOH AAA 34 634 118 HOH HOH . D 4 HOH AAA 35 635 40 HOH HOH . D 4 HOH AAA 36 636 4 HOH HOH . D 4 HOH AAA 37 637 84 HOH HOH . D 4 HOH AAA 38 638 150 HOH HOH . D 4 HOH AAA 39 639 79 HOH HOH . D 4 HOH AAA 40 640 23 HOH HOH . D 4 HOH AAA 41 641 153 HOH HOH . D 4 HOH AAA 42 642 123 HOH HOH . D 4 HOH AAA 43 643 147 HOH HOH . D 4 HOH AAA 44 644 36 HOH HOH . D 4 HOH AAA 45 645 49 HOH HOH . D 4 HOH AAA 46 646 116 HOH HOH . D 4 HOH AAA 47 647 24 HOH HOH . D 4 HOH AAA 48 648 117 HOH HOH . D 4 HOH AAA 49 649 5 HOH HOH . D 4 HOH AAA 50 650 74 HOH HOH . D 4 HOH AAA 51 651 25 HOH HOH . D 4 HOH AAA 52 652 9 HOH HOH . D 4 HOH AAA 53 653 35 HOH HOH . D 4 HOH AAA 54 654 88 HOH HOH . D 4 HOH AAA 55 655 14 HOH HOH . D 4 HOH AAA 56 656 44 HOH HOH . D 4 HOH AAA 57 657 175 HOH HOH . D 4 HOH AAA 58 658 12 HOH HOH . D 4 HOH AAA 59 659 146 HOH HOH . D 4 HOH AAA 60 660 94 HOH HOH . D 4 HOH AAA 61 661 48 HOH HOH . D 4 HOH AAA 62 662 17 HOH HOH . D 4 HOH AAA 63 663 159 HOH HOH . D 4 HOH AAA 64 664 55 HOH HOH . D 4 HOH AAA 65 665 96 HOH HOH . D 4 HOH AAA 66 666 15 HOH HOH . D 4 HOH AAA 67 667 11 HOH HOH . D 4 HOH AAA 68 668 26 HOH HOH . D 4 HOH AAA 69 669 85 HOH HOH . D 4 HOH AAA 70 670 22 HOH HOH . D 4 HOH AAA 71 671 106 HOH HOH . D 4 HOH AAA 72 672 10 HOH HOH . D 4 HOH AAA 73 673 64 HOH HOH . D 4 HOH AAA 74 674 155 HOH HOH . D 4 HOH AAA 75 675 156 HOH HOH . D 4 HOH AAA 76 676 87 HOH HOH . D 4 HOH AAA 77 677 93 HOH HOH . D 4 HOH AAA 78 678 108 HOH HOH . D 4 HOH AAA 79 679 3 HOH HOH . D 4 HOH AAA 80 680 104 HOH HOH . D 4 HOH AAA 81 681 21 HOH HOH . D 4 HOH AAA 82 682 166 HOH HOH . D 4 HOH AAA 83 683 20 HOH HOH . D 4 HOH AAA 84 684 7 HOH HOH . D 4 HOH AAA 85 685 165 HOH HOH . D 4 HOH AAA 86 686 130 HOH HOH . D 4 HOH AAA 87 687 30 HOH HOH . D 4 HOH AAA 88 688 19 HOH HOH . D 4 HOH AAA 89 689 60 HOH HOH . D 4 HOH AAA 90 690 58 HOH HOH . D 4 HOH AAA 91 691 38 HOH HOH . D 4 HOH AAA 92 692 31 HOH HOH . D 4 HOH AAA 93 693 65 HOH HOH . D 4 HOH AAA 94 694 29 HOH HOH . D 4 HOH AAA 95 695 52 HOH HOH . D 4 HOH AAA 96 696 62 HOH HOH . D 4 HOH AAA 97 697 138 HOH HOH . D 4 HOH AAA 98 698 56 HOH HOH . D 4 HOH AAA 99 699 115 HOH HOH . D 4 HOH AAA 100 700 53 HOH HOH . D 4 HOH AAA 101 701 18 HOH HOH . D 4 HOH AAA 102 702 163 HOH HOH . D 4 HOH AAA 103 703 69 HOH HOH . D 4 HOH AAA 104 704 28 HOH HOH . D 4 HOH AAA 105 705 41 HOH HOH . D 4 HOH AAA 106 706 70 HOH HOH . D 4 HOH AAA 107 707 81 HOH HOH . D 4 HOH AAA 108 708 169 HOH HOH . D 4 HOH AAA 109 709 68 HOH HOH . D 4 HOH AAA 110 710 107 HOH HOH . D 4 HOH AAA 111 711 151 HOH HOH . D 4 HOH AAA 112 712 121 HOH HOH . D 4 HOH AAA 113 713 161 HOH HOH . D 4 HOH AAA 114 714 2 HOH HOH . D 4 HOH AAA 115 715 160 HOH HOH . D 4 HOH AAA 116 716 157 HOH HOH . D 4 HOH AAA 117 717 110 HOH HOH . D 4 HOH AAA 118 718 75 HOH HOH . D 4 HOH AAA 119 719 59 HOH HOH . D 4 HOH AAA 120 720 72 HOH HOH . D 4 HOH AAA 121 721 137 HOH HOH . D 4 HOH AAA 122 722 128 HOH HOH . D 4 HOH AAA 123 723 149 HOH HOH . D 4 HOH AAA 124 724 80 HOH HOH . D 4 HOH AAA 125 725 112 HOH HOH . D 4 HOH AAA 126 726 170 HOH HOH . D 4 HOH AAA 127 727 122 HOH HOH . D 4 HOH AAA 128 728 174 HOH HOH . D 4 HOH AAA 129 729 135 HOH HOH . D 4 HOH AAA 130 730 78 HOH HOH . D 4 HOH AAA 131 731 57 HOH HOH . D 4 HOH AAA 132 732 90 HOH HOH . D 4 HOH AAA 133 733 144 HOH HOH . D 4 HOH AAA 134 734 82 HOH HOH . D 4 HOH AAA 135 735 172 HOH HOH . D 4 HOH AAA 136 736 154 HOH HOH . D 4 HOH AAA 137 737 126 HOH HOH . D 4 HOH AAA 138 738 63 HOH HOH . D 4 HOH AAA 139 739 39 HOH HOH . D 4 HOH AAA 140 740 173 HOH HOH . D 4 HOH AAA 141 741 33 HOH HOH . D 4 HOH AAA 142 742 92 HOH HOH . D 4 HOH AAA 143 743 171 HOH HOH . D 4 HOH AAA 144 744 102 HOH HOH . D 4 HOH AAA 145 745 179 HOH HOH . D 4 HOH AAA 146 746 129 HOH HOH . D 4 HOH AAA 147 747 66 HOH HOH . D 4 HOH AAA 148 748 177 HOH HOH . D 4 HOH AAA 149 749 76 HOH HOH . D 4 HOH AAA 150 750 125 HOH HOH . D 4 HOH AAA 151 751 120 HOH HOH . D 4 HOH AAA 152 752 43 HOH HOH . D 4 HOH AAA 153 753 77 HOH HOH . D 4 HOH AAA 154 754 136 HOH HOH . D 4 HOH AAA 155 755 134 HOH HOH . D 4 HOH AAA 156 756 98 HOH HOH . D 4 HOH AAA 157 757 54 HOH HOH . D 4 HOH AAA 158 758 86 HOH HOH . D 4 HOH AAA 159 759 100 HOH HOH . D 4 HOH AAA 160 760 95 HOH HOH . D 4 HOH AAA 161 761 34 HOH HOH . D 4 HOH AAA 162 762 42 HOH HOH . D 4 HOH AAA 163 763 71 HOH HOH . D 4 HOH AAA 164 764 103 HOH HOH . D 4 HOH AAA 165 765 51 HOH HOH . D 4 HOH AAA 166 766 111 HOH HOH . D 4 HOH AAA 167 767 168 HOH HOH . D 4 HOH AAA 168 768 133 HOH HOH . D 4 HOH AAA 169 769 99 HOH HOH . D 4 HOH AAA 170 770 132 HOH HOH . D 4 HOH AAA 171 771 131 HOH HOH . D 4 HOH AAA 172 772 127 HOH HOH . D 4 HOH AAA 173 773 105 HOH HOH . D 4 HOH AAA 174 774 61 HOH HOH . D 4 HOH AAA 175 775 101 HOH HOH . D 4 HOH AAA 176 776 167 HOH HOH . D 4 HOH AAA 177 777 114 HOH HOH . D 4 HOH AAA 178 778 124 HOH HOH . D 4 HOH AAA 179 779 176 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VBH . . . B 2 39.767 19.671 8.357 1 18.2 ? N1 VBH 501 AAA 1 HETATM 2 C C4 VBH . . . B 2 40.612 19.084 10.646 1 18.35 ? C4 VBH 501 AAA 1 HETATM 3 C C5 VBH . . . B 2 40.197 18.367 11.927 1 19.97 ? C5 VBH 501 AAA 1 HETATM 4 C C6 VBH . . . B 2 40.608 18.861 13.156 1 21.19 ? C6 VBH 501 AAA 1 HETATM 5 C C7 VBH . . . B 2 40.28 18.201 14.33 1 22.42 ? C7 VBH 501 AAA 1 HETATM 6 C C8 VBH . . . B 2 39.534 17.042 14.289 1 21.37 ? C8 VBH 501 AAA 1 HETATM 7 C C10 VBH . . . B 2 39.441 17.201 11.901 1 19.94 ? C10 VBH 501 AAA 1 HETATM 8 C C13 VBH . . . B 2 43.829 17.192 9.872 1 18.07 ? C13 VBH 501 AAA 1 HETATM 9 C C15 VBH . . . B 2 44.281 19.526 9.721 1 18.43 ? C15 VBH 501 AAA 1 HETATM 10 C C17 VBH . . . B 2 40.175 19.352 7.113 1 18.23 ? C17 VBH 501 AAA 1 HETATM 11 C C20 VBH . . . B 2 42.691 16.572 6.538 1 14.84 ? C20 VBH 501 AAA 1 HETATM 12 C C21 VBH . . . B 2 44.162 16.322 6.453 1 14.82 ? C21 VBH 501 AAA 1 HETATM 13 C C22 VBH . . . B 2 41.802 15.476 6.228 1 15.71 ? C22 VBH 501 AAA 1 HETATM 14 C C24 VBH . . . B 2 39.947 17.001 6.587 1 16.05 ? C24 VBH 501 AAA 1 HETATM 15 O O2 VBH . . . B 2 42.184 14.342 5.956 1 16.33 ? O2 VBH 501 AAA 1 HETATM 16 C C19 VBH . . . B 2 42.183 17.765 6.858 1 16.23 ? C19 VBH 501 AAA 1 HETATM 17 N N2 VBH . . . B 2 40.429 15.759 6.266 1 15.9 ? N2 VBH 501 AAA 1 HETATM 18 C C23 VBH . . . B 2 39.511 14.67 5.928 1 15.17 ? C23 VBH 501 AAA 1 HETATM 19 C C18 VBH . . . B 2 40.792 18.027 6.881 1 16.64 ? C18 VBH 501 AAA 1 HETATM 20 O O1 VBH . . . B 2 40.028 20.109 6.159 1 19.87 ? O1 VBH 501 AAA 1 HETATM 21 C C2 VBH . . . B 2 39.191 20.985 8.569 1 18.78 ? C2 VBH 501 AAA 1 HETATM 22 C C1 VBH . . . B 2 37.786 21.114 8.01 1 19.43 ? C1 VBH 501 AAA 1 HETATM 23 O O VBH . . . B 2 37.185 20.121 7.607 1 20.15 ? O VBH 501 AAA 1 HETATM 24 N N VBH . . . B 2 37.254 22.33 7.989 1 19.42 ? N VBH 501 AAA 1 HETATM 25 C C VBH . . . B 2 35.846 22.565 7.724 1 20.85 ? C VBH 501 AAA 1 HETATM 26 C C3 VBH . . . B 2 39.664 18.739 9.488 1 18.65 ? C3 VBH 501 AAA 1 HETATM 27 C C11 VBH . . . B 2 42.063 18.778 10.291 1 17.84 ? C11 VBH 501 AAA 1 HETATM 28 C C16 VBH . . . B 2 42.965 19.804 10.051 1 18.27 ? C16 VBH 501 AAA 1 HETATM 29 C C14 VBH . . . B 2 44.713 18.222 9.629 1 18.26 ? C14 VBH 501 AAA 1 HETATM 30 C C12 VBH . . . B 2 42.512 17.466 10.201 1 17.59 ? C12 VBH 501 AAA 1 HETATM 31 C C9 VBH . . . B 2 39.114 16.545 13.075 1 20.81 ? C9 VBH 501 AAA 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #