data_7OFF # _model_server_result.job_id TF5UrH8UvJmoyePYQm5_VA _model_server_result.datetime_utc '2025-01-25 13:51:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7off # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":712}' # _entry.id 7OFF # _exptl.entry_id 7OFF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 357.359 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2~{R})-2-[(9-oxidanylidenefluoren-4-yl)carbonylamino]-2-phenyl-ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7OFF _cell.length_a 103.19 _cell.length_b 103.19 _cell.length_c 55.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OFF _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id M _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H15 N O4' _chem_comp.formula_weight 357.359 _chem_comp.id VCB _chem_comp.mon_nstd_flag . _chem_comp.name '(2~{R})-2-[(9-oxidanylidenefluoren-4-yl)carbonylamino]-2-phenyl-ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 C19 VCB doub 389 n y C20 C21 VCB sing 390 n y C19 C18 VCB sing 391 n y C10 C9 VCB doub 392 n y C10 C11 VCB sing 393 n y C21 C22 VCB doub 394 n y C9 C8 VCB sing 395 n y C11 C12 VCB doub 396 n y C18 C17 VCB doub 397 n y C22 C17 VCB sing 398 n y C22 C1 VCB sing 399 n n C8 C7 VCB doub 400 n y C12 C7 VCB sing 401 n y C17 C3 VCB sing 402 n n C7 C6 VCB sing 403 n n O1 C1 VCB doub 404 n n C1 C2 VCB sing 405 n n O4 C5 VCB doub 406 n n C3 C2 VCB doub 407 n y C3 C4 VCB sing 408 n y C6 N1 VCB sing 409 n n C6 C13 VCB sing 410 n n C5 N1 VCB sing 411 n n C5 C4 VCB sing 412 n n C2 C16 VCB sing 413 n y C4 C14 VCB doub 414 n y C13 O3 VCB doub 415 n n C13 O2 VCB sing 416 n n C16 C15 VCB doub 417 n y C14 C15 VCB sing 418 n y C10 H5 VCB sing 419 n n C11 H6 VCB sing 420 n n C12 H7 VCB sing 421 n n C14 H8 VCB sing 422 n n C15 H9 VCB sing 423 n n C16 H10 VCB sing 424 n n C18 H11 VCB sing 425 n n C19 H12 VCB sing 426 n n C20 H13 VCB sing 427 n n C21 H14 VCB sing 428 n n C6 H2 VCB sing 429 n n C8 H3 VCB sing 430 n n C9 H4 VCB sing 431 n n N1 H1 VCB sing 432 n n O2 H15 VCB sing 433 n n # _atom_sites.entry_id 7OFF _atom_sites.fract_transf_matrix[1][1] 0.009691 _atom_sites.fract_transf_matrix[1][2] 0.005595 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017986 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 701 1 SO4 SO4 . C 2 SO4 A 1 702 2 SO4 SO4 . D 3 DMS A 1 703 2 DMS DMS . E 3 DMS A 1 704 3 DMS DMS . F 3 DMS A 1 705 4 DMS DMS . G 3 DMS A 1 706 5 DMS DMS . H 3 DMS A 1 707 6 DMS DMS . I 3 DMS A 1 708 7 DMS DMS . J 3 DMS A 1 709 9 DMS DMS . K 3 DMS A 1 710 11 DMS DMS . L 3 DMS A 1 711 12 DMS DMS . M 4 VCB A 1 712 1 VCB UNL . N 5 HOH A 1 801 96 HOH HOH . N 5 HOH A 2 802 117 HOH HOH . N 5 HOH A 3 803 70 HOH HOH . N 5 HOH A 4 804 76 HOH HOH . N 5 HOH A 5 805 160 HOH HOH . N 5 HOH A 6 806 124 HOH HOH . N 5 HOH A 7 807 118 HOH HOH . N 5 HOH A 8 808 120 HOH HOH . N 5 HOH A 9 809 82 HOH HOH . N 5 HOH A 10 810 149 HOH HOH . N 5 HOH A 11 811 7 HOH HOH . N 5 HOH A 12 812 152 HOH HOH . N 5 HOH A 13 813 43 HOH HOH . N 5 HOH A 14 814 106 HOH HOH . N 5 HOH A 15 815 127 HOH HOH . N 5 HOH A 16 816 79 HOH HOH . N 5 HOH A 17 817 40 HOH HOH . N 5 HOH A 18 818 57 HOH HOH . N 5 HOH A 19 819 31 HOH HOH . N 5 HOH A 20 820 38 HOH HOH . N 5 HOH A 21 821 90 HOH HOH . N 5 HOH A 22 822 48 HOH HOH . N 5 HOH A 23 823 29 HOH HOH . N 5 HOH A 24 824 18 HOH HOH . N 5 HOH A 25 825 65 HOH HOH . N 5 HOH A 26 826 50 HOH HOH . N 5 HOH A 27 827 147 HOH HOH . N 5 HOH A 28 828 130 HOH HOH . N 5 HOH A 29 829 159 HOH HOH . N 5 HOH A 30 830 146 HOH HOH . N 5 HOH A 31 831 71 HOH HOH . N 5 HOH A 32 832 75 HOH HOH . N 5 HOH A 33 833 109 HOH HOH . N 5 HOH A 34 834 84 HOH HOH . N 5 HOH A 35 835 119 HOH HOH . N 5 HOH A 36 836 46 HOH HOH . N 5 HOH A 37 837 61 HOH HOH . N 5 HOH A 38 838 111 HOH HOH . N 5 HOH A 39 839 78 HOH HOH . N 5 HOH A 40 840 132 HOH HOH . N 5 HOH A 41 841 92 HOH HOH . N 5 HOH A 42 842 128 HOH HOH . N 5 HOH A 43 843 93 HOH HOH . N 5 HOH A 44 844 4 HOH HOH . N 5 HOH A 45 845 63 HOH HOH . N 5 HOH A 46 846 107 HOH HOH . N 5 HOH A 47 847 140 HOH HOH . N 5 HOH A 48 848 59 HOH HOH . N 5 HOH A 49 849 85 HOH HOH . N 5 HOH A 50 850 110 HOH HOH . N 5 HOH A 51 851 14 HOH HOH . N 5 HOH A 52 852 23 HOH HOH . N 5 HOH A 53 853 10 HOH HOH . N 5 HOH A 54 854 91 HOH HOH . N 5 HOH A 55 855 141 HOH HOH . N 5 HOH A 56 856 2 HOH HOH . N 5 HOH A 57 857 158 HOH HOH . N 5 HOH A 58 858 162 HOH HOH . N 5 HOH A 59 859 56 HOH HOH . N 5 HOH A 60 860 86 HOH HOH . N 5 HOH A 61 861 88 HOH HOH . N 5 HOH A 62 862 133 HOH HOH . N 5 HOH A 63 863 116 HOH HOH . N 5 HOH A 64 864 83 HOH HOH . N 5 HOH A 65 865 115 HOH HOH . N 5 HOH A 66 866 68 HOH HOH . N 5 HOH A 67 867 51 HOH HOH . N 5 HOH A 68 868 34 HOH HOH . N 5 HOH A 69 869 64 HOH HOH . N 5 HOH A 70 870 98 HOH HOH . N 5 HOH A 71 871 142 HOH HOH . N 5 HOH A 72 872 52 HOH HOH . N 5 HOH A 73 873 15 HOH HOH . N 5 HOH A 74 874 89 HOH HOH . N 5 HOH A 75 875 99 HOH HOH . N 5 HOH A 76 876 95 HOH HOH . N 5 HOH A 77 877 58 HOH HOH . N 5 HOH A 78 878 131 HOH HOH . N 5 HOH A 79 879 123 HOH HOH . N 5 HOH A 80 880 97 HOH HOH . N 5 HOH A 81 881 17 HOH HOH . N 5 HOH A 82 882 94 HOH HOH . N 5 HOH A 83 883 77 HOH HOH . N 5 HOH A 84 884 26 HOH HOH . N 5 HOH A 85 885 104 HOH HOH . N 5 HOH A 86 886 126 HOH HOH . N 5 HOH A 87 887 42 HOH HOH . N 5 HOH A 88 888 143 HOH HOH . N 5 HOH A 89 889 69 HOH HOH . N 5 HOH A 90 890 150 HOH HOH . N 5 HOH A 91 891 12 HOH HOH . N 5 HOH A 92 892 144 HOH HOH . N 5 HOH A 93 893 125 HOH HOH . N 5 HOH A 94 894 30 HOH HOH . N 5 HOH A 95 895 28 HOH HOH . N 5 HOH A 96 896 44 HOH HOH . N 5 HOH A 97 897 55 HOH HOH . N 5 HOH A 98 898 39 HOH HOH . N 5 HOH A 99 899 101 HOH HOH . N 5 HOH A 100 900 80 HOH HOH . N 5 HOH A 101 901 35 HOH HOH . N 5 HOH A 102 902 87 HOH HOH . N 5 HOH A 103 903 114 HOH HOH . N 5 HOH A 104 904 45 HOH HOH . N 5 HOH A 105 905 137 HOH HOH . N 5 HOH A 106 906 8 HOH HOH . N 5 HOH A 107 907 25 HOH HOH . N 5 HOH A 108 908 22 HOH HOH . N 5 HOH A 109 909 20 HOH HOH . N 5 HOH A 110 910 102 HOH HOH . N 5 HOH A 111 911 27 HOH HOH . N 5 HOH A 112 912 6 HOH HOH . N 5 HOH A 113 913 33 HOH HOH . N 5 HOH A 114 914 11 HOH HOH . N 5 HOH A 115 915 16 HOH HOH . N 5 HOH A 116 916 5 HOH HOH . N 5 HOH A 117 917 148 HOH HOH . N 5 HOH A 118 918 9 HOH HOH . N 5 HOH A 119 919 47 HOH HOH . N 5 HOH A 120 920 54 HOH HOH . N 5 HOH A 121 921 156 HOH HOH . N 5 HOH A 122 922 121 HOH HOH . N 5 HOH A 123 923 100 HOH HOH . N 5 HOH A 124 924 139 HOH HOH . N 5 HOH A 125 925 13 HOH HOH . N 5 HOH A 126 926 73 HOH HOH . N 5 HOH A 127 927 157 HOH HOH . N 5 HOH A 128 928 60 HOH HOH . N 5 HOH A 129 929 3 HOH HOH . N 5 HOH A 130 930 21 HOH HOH . N 5 HOH A 131 931 37 HOH HOH . N 5 HOH A 132 932 24 HOH HOH . N 5 HOH A 133 933 134 HOH HOH . N 5 HOH A 134 934 53 HOH HOH . N 5 HOH A 135 935 19 HOH HOH . N 5 HOH A 136 936 49 HOH HOH . N 5 HOH A 137 937 113 HOH HOH . N 5 HOH A 138 938 32 HOH HOH . N 5 HOH A 139 939 138 HOH HOH . N 5 HOH A 140 940 36 HOH HOH . N 5 HOH A 141 941 67 HOH HOH . N 5 HOH A 142 942 103 HOH HOH . N 5 HOH A 143 943 74 HOH HOH . N 5 HOH A 144 944 155 HOH HOH . N 5 HOH A 145 945 136 HOH HOH . N 5 HOH A 146 946 108 HOH HOH . N 5 HOH A 147 947 135 HOH HOH . N 5 HOH A 148 948 145 HOH HOH . N 5 HOH A 149 949 122 HOH HOH . N 5 HOH A 150 950 161 HOH HOH . N 5 HOH A 151 951 72 HOH HOH . N 5 HOH A 152 952 129 HOH HOH . N 5 HOH A 153 953 112 HOH HOH . N 5 HOH A 154 954 41 HOH HOH . N 5 HOH A 155 955 81 HOH HOH . N 5 HOH A 156 956 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 VCB . . . M 4 42.996 -26.708 10.409 1 24.75 ? C1 VCB 712 A 1 HETATM 2 C C10 VCB . . . M 4 35.214 -25.205 7.677 0.86 22.95 ? C10 VCB 712 A 1 HETATM 3 C C11 VCB . . . M 4 36.405 -24.918 8.298 1 22.86 ? C11 VCB 712 A 1 HETATM 4 C C12 VCB . . . M 4 36.737 -25.53 9.494 1 23.99 ? C12 VCB 712 A 1 HETATM 5 C C13 VCB . . . M 4 35.445 -26.497 12.528 0.88 24.8 ? C13 VCB 712 A 1 HETATM 6 C C14 VCB . . . M 4 40.293 -28.131 13.344 0.88 25.49 ? C14 VCB 712 A 1 HETATM 7 C C15 VCB . . . M 4 41.593 -27.891 13.769 0.95 25.74 ? C15 VCB 712 A 1 HETATM 8 C C16 VCB . . . M 4 42.556 -27.432 12.884 0.93 25.14 ? C16 VCB 712 A 1 HETATM 9 C C17 VCB . . . M 4 40.787 -27.105 9.701 1 22.68 ? C17 VCB 712 A 1 HETATM 10 C C18 VCB . . . M 4 39.719 -27.164 8.803 1 22.69 ? C18 VCB 712 A 1 HETATM 11 C C19 VCB . . . M 4 39.938 -26.794 7.484 1 22.96 ? C19 VCB 712 A 1 HETATM 12 C C2 VCB . . . M 4 42.194 -27.201 11.57 0.93 24.59 ? C2 VCB 712 A 1 HETATM 13 C C20 VCB . . . M 4 41.186 -26.358 7.065 0.97 24.54 ? C20 VCB 712 A 1 HETATM 14 C C21 VCB . . . M 4 42.252 -26.29 7.954 0.97 24.64 ? C21 VCB 712 A 1 HETATM 15 C C22 VCB . . . M 4 42.037 -26.666 9.264 0.97 24.25 ? C22 VCB 712 A 1 HETATM 16 C C3 VCB . . . M 4 40.872 -27.435 11.13 1 23.02 ? C3 VCB 712 A 1 HETATM 17 C C4 VCB . . . M 4 39.914 -27.899 12.02 0.94 23.83 ? C4 VCB 712 A 1 HETATM 18 C C5 VCB . . . M 4 38.513 -28.155 11.558 1 22.11 ? C5 VCB 712 A 1 HETATM 19 C C6 VCB . . . M 4 36.229 -27.156 11.365 1 23.71 ? C6 VCB 712 A 1 HETATM 20 C C7 VCB . . . M 4 35.876 -26.448 10.07 1 23.65 ? C7 VCB 712 A 1 HETATM 21 C C8 VCB . . . M 4 34.68 -26.732 9.435 0.89 23.37 ? C8 VCB 712 A 1 HETATM 22 C C9 VCB . . . M 4 34.344 -26.108 8.245 0.91 22.88 ? C9 VCB 712 A 1 HETATM 23 N N1 VCB . . . M 4 37.649 -27.119 11.699 1 23.97 ? N1 VCB 712 A 1 HETATM 24 O O1 VCB . . . M 4 44.174 -26.414 10.402 0.86 26.67 ? O1 VCB 712 A 1 HETATM 25 O O2 VCB . . . M 4 36.063 -25.66 13.241 0.82 25.14 ? O2 VCB 712 A 1 HETATM 26 O O3 VCB . . . M 4 34.256 -26.815 12.67 0.98 26.58 ? O3 VCB 712 A 1 HETATM 27 O O4 VCB . . . M 4 38.201 -29.241 11.063 0.91 22.67 ? O4 VCB 712 A 1 HETATM 28 H H5 VCB . . . M 4 34.992 -24.783 6.862 0.96 27.56 ? H5 VCB 712 A 1 HETATM 29 H H6 VCB . . . M 4 37.002 -24.299 7.907 0.95 27.45 ? H6 VCB 712 A 1 HETATM 30 H H7 VCB . . . M 4 37.553 -25.32 9.92 0.94 28.82 ? H7 VCB 712 A 1 HETATM 31 H H8 VCB . . . M 4 39.636 -28.465 13.978 0.95 30.61 ? H8 VCB 712 A 1 HETATM 32 H H9 VCB . . . M 4 41.825 -28.044 14.674 0.98 30.91 ? H9 VCB 712 A 1 HETATM 33 H H10 VCB . . . M 4 43.441 -27.28 13.174 0.93 30.19 ? H10 VCB 712 A 1 HETATM 34 H H11 VCB . . . M 4 38.86 -27.452 9.091 0.94 27.26 ? H11 VCB 712 A 1 HETATM 35 H H12 VCB . . . M 4 39.229 -26.839 6.863 0.92 27.58 ? H12 VCB 712 A 1 HETATM 36 H H13 VCB . . . M 4 41.312 -26.104 6.165 0.98 29.47 ? H13 VCB 712 A 1 HETATM 37 H H14 VCB . . . M 4 43.101 -25.995 7.668 0.91 29.59 ? H14 VCB 712 A 1 HETATM 38 H H2 VCB . . . M 4 35.942 -28.098 11.246 0.97 28.48 ? H2 VCB 712 A 1 HETATM 39 H H3 VCB . . . M 4 34.087 -27.359 9.817 0.95 28.07 ? H3 VCB 712 A 1 HETATM 40 H H4 VCB . . . M 4 33.522 -26.303 7.825 0.99 27.48 ? H4 VCB 712 A 1 HETATM 41 H H1 VCB . . . M 4 37.974 -26.367 12.017 0.91 28.79 ? H1 VCB 712 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 41 #