data_7OGC # _model_server_result.job_id 0EWIBzKJDcU2aB1xLBD6wQ _model_server_result.datetime_utc '2024-12-21 19:01:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ogc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7OGC # _exptl.entry_id 7OGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7OGC _cell.length_a 38.897 _cell.length_b 38.897 _cell.length_c 165.088 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 17 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 A OG1 THR 35 A THR 35 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc3 B O2G GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc4 B O2B GNP . A GNP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc5 C MG MG . A MG 202 1_555 G O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc6 C MG MG . A MG 202 1_555 G O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 7OGC _atom_sites.fract_transf_matrix[1][1] 0.025709 _atom_sites.fract_transf_matrix[1][2] 0.014843 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029686 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006057 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 201 201 GNP GNP . C 3 MG A 1 202 202 MG MG . D 4 PGE A 1 203 203 PGE PGE . E 5 1PE A 1 204 204 1PE 1PE . F 4 PGE A 1 205 205 PGE PGE . G 6 HOH A 1 301 301 HOH HOH . G 6 HOH A 2 302 302 HOH HOH . G 6 HOH A 3 303 303 HOH HOH . G 6 HOH A 4 304 304 HOH HOH . G 6 HOH A 5 305 305 HOH HOH . G 6 HOH A 6 306 306 HOH HOH . G 6 HOH A 7 307 307 HOH HOH . G 6 HOH A 8 308 308 HOH HOH . G 6 HOH A 9 309 309 HOH HOH . G 6 HOH A 10 310 310 HOH HOH . G 6 HOH A 11 311 311 HOH HOH . G 6 HOH A 12 312 312 HOH HOH . G 6 HOH A 13 313 313 HOH HOH . G 6 HOH A 14 314 314 HOH HOH . G 6 HOH A 15 315 315 HOH HOH . G 6 HOH A 16 316 316 HOH HOH . G 6 HOH A 17 317 317 HOH HOH . G 6 HOH A 18 318 318 HOH HOH . G 6 HOH A 19 319 319 HOH HOH . G 6 HOH A 20 320 320 HOH HOH . G 6 HOH A 21 321 321 HOH HOH . G 6 HOH A 22 322 322 HOH HOH . G 6 HOH A 23 323 323 HOH HOH . G 6 HOH A 24 324 324 HOH HOH . G 6 HOH A 25 325 325 HOH HOH . G 6 HOH A 26 326 326 HOH HOH . G 6 HOH A 27 327 327 HOH HOH . G 6 HOH A 28 328 328 HOH HOH . G 6 HOH A 29 329 329 HOH HOH . G 6 HOH A 30 330 330 HOH HOH . G 6 HOH A 31 331 331 HOH HOH . G 6 HOH A 32 332 332 HOH HOH . G 6 HOH A 33 333 333 HOH HOH . G 6 HOH A 34 334 334 HOH HOH . G 6 HOH A 35 335 335 HOH HOH . G 6 HOH A 36 336 336 HOH HOH . G 6 HOH A 37 337 337 HOH HOH . G 6 HOH A 38 338 338 HOH HOH . G 6 HOH A 39 339 339 HOH HOH . G 6 HOH A 40 340 340 HOH HOH . G 6 HOH A 41 341 341 HOH HOH . G 6 HOH A 42 342 342 HOH HOH . G 6 HOH A 43 343 343 HOH HOH . G 6 HOH A 44 344 344 HOH HOH . G 6 HOH A 45 345 345 HOH HOH . G 6 HOH A 46 346 346 HOH HOH . G 6 HOH A 47 347 347 HOH HOH . G 6 HOH A 48 348 348 HOH HOH . G 6 HOH A 49 349 349 HOH HOH . G 6 HOH A 50 350 350 HOH HOH . G 6 HOH A 51 351 351 HOH HOH . G 6 HOH A 52 352 352 HOH HOH . G 6 HOH A 53 353 353 HOH HOH . G 6 HOH A 54 354 354 HOH HOH . G 6 HOH A 55 355 355 HOH HOH . G 6 HOH A 56 356 356 HOH HOH . G 6 HOH A 57 357 357 HOH HOH . G 6 HOH A 58 358 358 HOH HOH . G 6 HOH A 59 359 359 HOH HOH . G 6 HOH A 60 360 360 HOH HOH . G 6 HOH A 61 361 361 HOH HOH . G 6 HOH A 62 362 362 HOH HOH . G 6 HOH A 63 363 363 HOH HOH . G 6 HOH A 64 364 364 HOH HOH . G 6 HOH A 65 365 365 HOH HOH . G 6 HOH A 66 366 366 HOH HOH . G 6 HOH A 67 367 367 HOH HOH . G 6 HOH A 68 368 368 HOH HOH . G 6 HOH A 69 369 369 HOH HOH . G 6 HOH A 70 370 370 HOH HOH . G 6 HOH A 71 371 371 HOH HOH . G 6 HOH A 72 372 372 HOH HOH . G 6 HOH A 73 373 373 HOH HOH . G 6 HOH A 74 374 374 HOH HOH . G 6 HOH A 75 375 375 HOH HOH . G 6 HOH A 76 376 376 HOH HOH . G 6 HOH A 77 377 377 HOH HOH . G 6 HOH A 78 378 378 HOH HOH . G 6 HOH A 79 379 379 HOH HOH . G 6 HOH A 80 380 380 HOH HOH . G 6 HOH A 81 381 381 HOH HOH . G 6 HOH A 82 382 382 HOH HOH . G 6 HOH A 83 383 383 HOH HOH . G 6 HOH A 84 384 384 HOH HOH . G 6 HOH A 85 385 385 HOH HOH . G 6 HOH A 86 386 386 HOH HOH . G 6 HOH A 87 387 387 HOH HOH . G 6 HOH A 88 388 388 HOH HOH . G 6 HOH A 89 389 389 HOH HOH . G 6 HOH A 90 390 390 HOH HOH . G 6 HOH A 91 391 391 HOH HOH . G 6 HOH A 92 392 392 HOH HOH . G 6 HOH A 93 393 393 HOH HOH . G 6 HOH A 94 394 394 HOH HOH . G 6 HOH A 95 395 395 HOH HOH . G 6 HOH A 96 396 396 HOH HOH . G 6 HOH A 97 397 397 HOH HOH . G 6 HOH A 98 398 398 HOH HOH . G 6 HOH A 99 399 399 HOH HOH . G 6 HOH A 100 400 400 HOH HOH . G 6 HOH A 101 401 401 HOH HOH . G 6 HOH A 102 402 402 HOH HOH . G 6 HOH A 103 403 403 HOH HOH . G 6 HOH A 104 404 404 HOH HOH . G 6 HOH A 105 405 405 HOH HOH . G 6 HOH A 106 406 406 HOH HOH . G 6 HOH A 107 407 407 HOH HOH . G 6 HOH A 108 408 408 HOH HOH . G 6 HOH A 109 409 409 HOH HOH . G 6 HOH A 110 410 410 HOH HOH . G 6 HOH A 111 411 411 HOH HOH . G 6 HOH A 112 412 412 HOH HOH . G 6 HOH A 113 413 413 HOH HOH . G 6 HOH A 114 414 414 HOH HOH . G 6 HOH A 115 415 415 HOH HOH . G 6 HOH A 116 416 416 HOH HOH . G 6 HOH A 117 417 417 HOH HOH . G 6 HOH A 118 418 418 HOH HOH . G 6 HOH A 119 419 419 HOH HOH . G 6 HOH A 120 420 420 HOH HOH . G 6 HOH A 121 421 421 HOH HOH . G 6 HOH A 122 422 422 HOH HOH . G 6 HOH A 123 423 423 HOH HOH . G 6 HOH A 124 424 424 HOH HOH . G 6 HOH A 125 425 425 HOH HOH . G 6 HOH A 126 426 426 HOH HOH . G 6 HOH A 127 427 427 HOH HOH . G 6 HOH A 128 428 428 HOH HOH . G 6 HOH A 129 429 429 HOH HOH . G 6 HOH A 130 430 430 HOH HOH . G 6 HOH A 131 431 431 HOH HOH . G 6 HOH A 132 432 432 HOH HOH . G 6 HOH A 133 433 433 HOH HOH . G 6 HOH A 134 434 434 HOH HOH . G 6 HOH A 135 435 435 HOH HOH . G 6 HOH A 136 436 436 HOH HOH . G 6 HOH A 137 437 437 HOH HOH . G 6 HOH A 138 438 438 HOH HOH . G 6 HOH A 139 439 439 HOH HOH . G 6 HOH A 140 440 440 HOH HOH . G 6 HOH A 141 441 441 HOH HOH . G 6 HOH A 142 442 442 HOH HOH . G 6 HOH A 143 443 443 HOH HOH . G 6 HOH A 144 444 444 HOH HOH . G 6 HOH A 145 445 445 HOH HOH . G 6 HOH A 146 446 446 HOH HOH . G 6 HOH A 147 447 447 HOH HOH . G 6 HOH A 148 448 448 HOH HOH . G 6 HOH A 149 449 449 HOH HOH . G 6 HOH A 150 450 450 HOH HOH . G 6 HOH A 151 451 451 HOH HOH . G 6 HOH A 152 452 452 HOH HOH . G 6 HOH A 153 453 453 HOH HOH . G 6 HOH A 154 454 454 HOH HOH . G 6 HOH A 155 455 455 HOH HOH . G 6 HOH A 156 456 456 HOH HOH . G 6 HOH A 157 457 457 HOH HOH . G 6 HOH A 158 458 458 HOH HOH . G 6 HOH A 159 459 459 HOH HOH . G 6 HOH A 160 460 460 HOH HOH . G 6 HOH A 161 461 461 HOH HOH . G 6 HOH A 162 462 462 HOH HOH . G 6 HOH A 163 463 463 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . E 5 19.635 -2.059 -17.113 1 44.76 ? OH2 1PE 204 A 1 HETATM 2 C C12 1PE . . . E 5 18.542 -1.412 -17.799 1 40.62 ? C12 1PE 204 A 1 HETATM 3 C C22 1PE . . . E 5 17.493 -2.474 -18.009 1 41.21 ? C22 1PE 204 A 1 HETATM 4 O OH3 1PE . . . E 5 16.496 -2.497 -16.959 1 42.47 ? OH3 1PE 204 A 1 HETATM 5 C C13 1PE . . . E 5 16.387 -4.914 -16.958 1 33.51 ? C13 1PE 204 A 1 HETATM 6 C C23 1PE . . . E 5 15.592 -3.622 -16.981 1 32.9 ? C23 1PE 204 A 1 HETATM 7 O OH4 1PE . . . E 5 15.721 -5.888 -16.186 1 29.72 ? OH4 1PE 204 A 1 HETATM 8 C C14 1PE . . . E 5 13.959 -7.47 -16.047 1 24.9 ? C14 1PE 204 A 1 HETATM 9 C C24 1PE . . . E 5 14.599 -6.434 -16.865 1 23.35 ? C24 1PE 204 A 1 HETATM 10 O OH5 1PE . . . E 5 12.81 -7.889 -16.761 1 28.63 ? OH5 1PE 204 A 1 HETATM 11 C C15 1PE . . . E 5 13.915 -9.487 -18.242 1 23.07 ? C15 1PE 204 A 1 HETATM 12 C C25 1PE . . . E 5 12.762 -8.692 -17.917 1 25.13 ? C25 1PE 204 A 1 HETATM 13 O OH6 1PE . . . E 5 13.674 -10.396 -19.407 1 25.17 ? OH6 1PE 204 A 1 HETATM 14 C C16 1PE . . . E 5 15.981 -11.157 -19.774 1 27.94 ? C16 1PE 204 A 1 HETATM 15 C C26 1PE . . . E 5 14.605 -11.466 -19.268 1 23.44 ? C26 1PE 204 A 1 HETATM 16 O OH7 1PE . . . E 5 16.789 -12.322 -19.603 1 35.51 ? OH7 1PE 204 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #