data_7OGY
#
_model_server_result.job_id            xTSLTF4zgJ16wZhk5RdjJg 
_model_server_result.datetime_utc      '2024-11-14 09:06:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ogy 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    7OGY 
#
_exptl.entry_id    7OGY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OGY 
_cell.length_a            71.851 
_cell.length_b            52.411 
_cell.length_c            32.066 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OGY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 F N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7OGY 
_atom_sites.fract_transf_matrix[1][1]    0.013918 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031186 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO AAA 1 501 1 EDO EDO . 
C 2 EDO AAA 1 502 2 EDO EDO . 
D 2 EDO AAA 1 503 3 EDO EDO . 
E 3 VE5 AAA 1 504 4000 VE5 LIG . 
F 2 EDO AAA 1 505 2 EDO EDO . 
G 4 PEG AAA 1 506 1 PEG PEG . 
H 5 HOH AAA 1 601 24 HOH HOH . 
H 5 HOH AAA 2 602 123 HOH HOH . 
H 5 HOH AAA 3 603 38 HOH HOH . 
H 5 HOH AAA 4 604 126 HOH HOH . 
H 5 HOH AAA 5 605 159 HOH HOH . 
H 5 HOH AAA 6 606 10 HOH HOH . 
H 5 HOH AAA 7 607 75 HOH HOH . 
H 5 HOH AAA 8 608 125 HOH HOH . 
H 5 HOH AAA 9 609 162 HOH HOH . 
H 5 HOH AAA 10 610 114 HOH HOH . 
H 5 HOH AAA 11 611 4 HOH HOH . 
H 5 HOH AAA 12 612 148 HOH HOH . 
H 5 HOH AAA 13 613 1 HOH HOH . 
H 5 HOH AAA 14 614 120 HOH HOH . 
H 5 HOH AAA 15 615 129 HOH HOH . 
H 5 HOH AAA 16 616 113 HOH HOH . 
H 5 HOH AAA 17 617 27 HOH HOH . 
H 5 HOH AAA 18 618 172 HOH HOH . 
H 5 HOH AAA 19 619 155 HOH HOH . 
H 5 HOH AAA 20 620 73 HOH HOH . 
H 5 HOH AAA 21 621 42 HOH HOH . 
H 5 HOH AAA 22 622 121 HOH HOH . 
H 5 HOH AAA 23 623 86 HOH HOH . 
H 5 HOH AAA 24 624 66 HOH HOH . 
H 5 HOH AAA 25 625 25 HOH HOH . 
H 5 HOH AAA 26 626 9 HOH HOH . 
H 5 HOH AAA 27 627 13 HOH HOH . 
H 5 HOH AAA 28 628 90 HOH HOH . 
H 5 HOH AAA 29 629 118 HOH HOH . 
H 5 HOH AAA 30 630 26 HOH HOH . 
H 5 HOH AAA 31 631 136 HOH HOH . 
H 5 HOH AAA 32 632 88 HOH HOH . 
H 5 HOH AAA 33 633 51 HOH HOH . 
H 5 HOH AAA 34 634 96 HOH HOH . 
H 5 HOH AAA 35 635 173 HOH HOH . 
H 5 HOH AAA 36 636 17 HOH HOH . 
H 5 HOH AAA 37 637 44 HOH HOH . 
H 5 HOH AAA 38 638 165 HOH HOH . 
H 5 HOH AAA 39 639 65 HOH HOH . 
H 5 HOH AAA 40 640 130 HOH HOH . 
H 5 HOH AAA 41 641 40 HOH HOH . 
H 5 HOH AAA 42 642 122 HOH HOH . 
H 5 HOH AAA 43 643 22 HOH HOH . 
H 5 HOH AAA 44 644 5 HOH HOH . 
H 5 HOH AAA 45 645 85 HOH HOH . 
H 5 HOH AAA 46 646 128 HOH HOH . 
H 5 HOH AAA 47 647 30 HOH HOH . 
H 5 HOH AAA 48 648 34 HOH HOH . 
H 5 HOH AAA 49 649 107 HOH HOH . 
H 5 HOH AAA 50 650 69 HOH HOH . 
H 5 HOH AAA 51 651 46 HOH HOH . 
H 5 HOH AAA 52 652 124 HOH HOH . 
H 5 HOH AAA 53 653 62 HOH HOH . 
H 5 HOH AAA 54 654 138 HOH HOH . 
H 5 HOH AAA 55 655 14 HOH HOH . 
H 5 HOH AAA 56 656 7 HOH HOH . 
H 5 HOH AAA 57 657 87 HOH HOH . 
H 5 HOH AAA 58 658 6 HOH HOH . 
H 5 HOH AAA 59 659 23 HOH HOH . 
H 5 HOH AAA 60 660 95 HOH HOH . 
H 5 HOH AAA 61 661 18 HOH HOH . 
H 5 HOH AAA 62 662 35 HOH HOH . 
H 5 HOH AAA 63 663 12 HOH HOH . 
H 5 HOH AAA 64 664 144 HOH HOH . 
H 5 HOH AAA 65 665 33 HOH HOH . 
H 5 HOH AAA 66 666 174 HOH HOH . 
H 5 HOH AAA 67 667 94 HOH HOH . 
H 5 HOH AAA 68 668 127 HOH HOH . 
H 5 HOH AAA 69 669 50 HOH HOH . 
H 5 HOH AAA 70 670 83 HOH HOH . 
H 5 HOH AAA 71 671 32 HOH HOH . 
H 5 HOH AAA 72 672 31 HOH HOH . 
H 5 HOH AAA 73 673 2 HOH HOH . 
H 5 HOH AAA 74 674 102 HOH HOH . 
H 5 HOH AAA 75 675 39 HOH HOH . 
H 5 HOH AAA 76 676 77 HOH HOH . 
H 5 HOH AAA 77 677 37 HOH HOH . 
H 5 HOH AAA 78 678 150 HOH HOH . 
H 5 HOH AAA 79 679 67 HOH HOH . 
H 5 HOH AAA 80 680 11 HOH HOH . 
H 5 HOH AAA 81 681 72 HOH HOH . 
H 5 HOH AAA 82 682 8 HOH HOH . 
H 5 HOH AAA 83 683 61 HOH HOH . 
H 5 HOH AAA 84 684 20 HOH HOH . 
H 5 HOH AAA 85 685 74 HOH HOH . 
H 5 HOH AAA 86 686 43 HOH HOH . 
H 5 HOH AAA 87 687 109 HOH HOH . 
H 5 HOH AAA 88 688 82 HOH HOH . 
H 5 HOH AAA 89 689 112 HOH HOH . 
H 5 HOH AAA 90 690 16 HOH HOH . 
H 5 HOH AAA 91 691 21 HOH HOH . 
H 5 HOH AAA 92 692 79 HOH HOH . 
H 5 HOH AAA 93 693 48 HOH HOH . 
H 5 HOH AAA 94 694 149 HOH HOH . 
H 5 HOH AAA 95 695 76 HOH HOH . 
H 5 HOH AAA 96 696 60 HOH HOH . 
H 5 HOH AAA 97 697 28 HOH HOH . 
H 5 HOH AAA 98 698 29 HOH HOH . 
H 5 HOH AAA 99 699 154 HOH HOH . 
H 5 HOH AAA 100 700 111 HOH HOH . 
H 5 HOH AAA 101 701 119 HOH HOH . 
H 5 HOH AAA 102 702 15 HOH HOH . 
H 5 HOH AAA 103 703 141 HOH HOH . 
H 5 HOH AAA 104 704 93 HOH HOH . 
H 5 HOH AAA 105 705 91 HOH HOH . 
H 5 HOH AAA 106 706 3 HOH HOH . 
H 5 HOH AAA 107 707 81 HOH HOH . 
H 5 HOH AAA 108 708 19 HOH HOH . 
H 5 HOH AAA 109 709 68 HOH HOH . 
H 5 HOH AAA 110 710 133 HOH HOH . 
H 5 HOH AAA 111 711 55 HOH HOH . 
H 5 HOH AAA 112 712 52 HOH HOH . 
H 5 HOH AAA 113 713 49 HOH HOH . 
H 5 HOH AAA 114 714 54 HOH HOH . 
H 5 HOH AAA 115 715 134 HOH HOH . 
H 5 HOH AAA 116 716 163 HOH HOH . 
H 5 HOH AAA 117 717 132 HOH HOH . 
H 5 HOH AAA 118 718 41 HOH HOH . 
H 5 HOH AAA 119 719 59 HOH HOH . 
H 5 HOH AAA 120 720 47 HOH HOH . 
H 5 HOH AAA 121 721 98 HOH HOH . 
H 5 HOH AAA 122 722 135 HOH HOH . 
H 5 HOH AAA 123 723 108 HOH HOH . 
H 5 HOH AAA 124 724 105 HOH HOH . 
H 5 HOH AAA 125 725 169 HOH HOH . 
H 5 HOH AAA 126 726 131 HOH HOH . 
H 5 HOH AAA 127 727 101 HOH HOH . 
H 5 HOH AAA 128 728 99 HOH HOH . 
H 5 HOH AAA 129 729 115 HOH HOH . 
H 5 HOH AAA 130 730 56 HOH HOH . 
H 5 HOH AAA 131 731 53 HOH HOH . 
H 5 HOH AAA 132 732 146 HOH HOH . 
H 5 HOH AAA 133 733 89 HOH HOH . 
H 5 HOH AAA 134 734 71 HOH HOH . 
H 5 HOH AAA 135 735 156 HOH HOH . 
H 5 HOH AAA 136 736 80 HOH HOH . 
H 5 HOH AAA 137 737 171 HOH HOH . 
H 5 HOH AAA 138 738 63 HOH HOH . 
H 5 HOH AAA 139 739 97 HOH HOH . 
H 5 HOH AAA 140 740 110 HOH HOH . 
H 5 HOH AAA 141 741 64 HOH HOH . 
H 5 HOH AAA 142 742 140 HOH HOH . 
H 5 HOH AAA 143 743 92 HOH HOH . 
H 5 HOH AAA 144 744 157 HOH HOH . 
H 5 HOH AAA 145 745 103 HOH HOH . 
H 5 HOH AAA 146 746 164 HOH HOH . 
H 5 HOH AAA 147 747 106 HOH HOH . 
H 5 HOH AAA 148 748 160 HOH HOH . 
H 5 HOH AAA 149 749 104 HOH HOH . 
H 5 HOH AAA 150 750 139 HOH HOH . 
H 5 HOH AAA 151 751 100 HOH HOH . 
H 5 HOH AAA 152 752 36 HOH HOH . 
H 5 HOH AAA 153 753 142 HOH HOH . 
H 5 HOH AAA 154 754 170 HOH HOH . 
H 5 HOH AAA 155 755 175 HOH HOH . 
H 5 HOH AAA 156 756 117 HOH HOH . 
H 5 HOH AAA 157 757 147 HOH HOH . 
H 5 HOH AAA 158 758 57 HOH HOH . 
H 5 HOH AAA 159 759 137 HOH HOH . 
H 5 HOH AAA 160 760 58 HOH HOH . 
H 5 HOH AAA 161 761 166 HOH HOH . 
H 5 HOH AAA 162 762 158 HOH HOH . 
H 5 HOH AAA 163 763 78 HOH HOH . 
H 5 HOH AAA 164 764 151 HOH HOH . 
H 5 HOH AAA 165 765 70 HOH HOH . 
H 5 HOH AAA 166 766 116 HOH HOH . 
H 5 HOH AAA 167 767 45 HOH HOH . 
H 5 HOH AAA 168 768 167 HOH HOH . 
H 5 HOH AAA 169 769 143 HOH HOH . 
H 5 HOH AAA 170 770 168 HOH HOH . 
H 5 HOH AAA 171 771 145 HOH HOH . 
H 5 HOH AAA 172 772 153 HOH HOH . 
H 5 HOH AAA 173 773 161 HOH HOH . 
H 5 HOH AAA 174 774 84 HOH HOH . 
H 5 HOH AAA 175 775 152 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 2 50.794 9.105 8.169 1 55.48 0 C1 EDO 503 AAA 1 
HETATM 2 O O1 EDO . . . D 2 52.194 9.179 8.346 1 57.3 0 O1 EDO 503 AAA 1 
HETATM 3 C C2 EDO . . . D 2 50.334 7.768 7.717 1 54.85 0 C2 EDO 503 AAA 1 
HETATM 4 O O2 EDO . . . D 2 50.128 6.855 8.777 1 54.91 0 O2 EDO 503 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#