data_7OJB # _model_server_result.job_id TRfHbIORGSKlqlVBWk6Ffw _model_server_result.datetime_utc '2025-07-15 02:35:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ojb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 7OJB # _exptl.entry_id 7OJB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.095 _cell.angle_gamma 90 _cell.entry_id 7OJB _cell.length_a 69.013 _cell.length_b 54.013 _cell.length_c 85.124 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OJB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 41 A GLN 48 1_555 C K K . A K 402 3_545 ? ? ? ? ? ? ? ? ? ? ? ? 2.932 ? metalc ? metalc2 A O LEU 193 A LEU 200 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.036 ? metalc ? metalc3 A O VAL 196 A VAL 203 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc4 A OD1 ASN 201 A ASN 208 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.938 ? metalc ? metalc5 A O LEU 202 A LEU 209 1_555 C K K . A K 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.876 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 79 n n PB O2B GDP sing 80 n n PB O3B GDP sing 81 n n PB O3A GDP sing 82 n n O2B HOB2 GDP sing 83 n n O3B HOB3 GDP sing 84 n n O3A PA GDP sing 85 n n PA O1A GDP doub 86 n n PA O2A GDP sing 87 n n PA O5' GDP sing 88 n n O2A HOA2 GDP sing 89 n n O5' C5' GDP sing 90 n n C5' C4' GDP sing 91 n n C5' H5' GDP sing 92 n n C5' "H5''" GDP sing 93 n n C4' O4' GDP sing 94 n n C4' C3' GDP sing 95 n n C4' H4' GDP sing 96 n n O4' C1' GDP sing 97 n n C3' O3' GDP sing 98 n n C3' C2' GDP sing 99 n n C3' H3' GDP sing 100 n n O3' HO3' GDP sing 101 n n C2' O2' GDP sing 102 n n C2' C1' GDP sing 103 n n C2' H2' GDP sing 104 n n O2' HO2' GDP sing 105 n n C1' N9 GDP sing 106 n n C1' H1' GDP sing 107 n n N9 C8 GDP sing 108 n y N9 C4 GDP sing 109 n y C8 N7 GDP doub 110 n y C8 H8 GDP sing 111 n n N7 C5 GDP sing 112 n y C5 C6 GDP sing 113 n n C5 C4 GDP doub 114 n y C6 O6 GDP doub 115 n n C6 N1 GDP sing 116 n n N1 C2 GDP sing 117 n n N1 HN1 GDP sing 118 n n C2 N2 GDP sing 119 n n C2 N3 GDP doub 120 n n N2 HN21 GDP sing 121 n n N2 HN22 GDP sing 122 n n N3 C4 GDP sing 123 n n # _atom_sites.entry_id 7OJB _atom_sites.fract_transf_matrix[1][1] 0.01449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004735 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018514 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012359 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 401 1 GDP GDP . C 3 K A 1 402 1 K K . D 4 EDO A 1 403 1 EDO EDO . E 5 HOH A 1 501 49 HOH HOH . E 5 HOH A 2 502 263 HOH HOH . E 5 HOH A 3 503 185 HOH HOH . E 5 HOH A 4 504 29 HOH HOH . E 5 HOH A 5 505 91 HOH HOH . E 5 HOH A 6 506 202 HOH HOH . E 5 HOH A 7 507 276 HOH HOH . E 5 HOH A 8 508 228 HOH HOH . E 5 HOH A 9 509 261 HOH HOH . E 5 HOH A 10 510 161 HOH HOH . E 5 HOH A 11 511 172 HOH HOH . E 5 HOH A 12 512 131 HOH HOH . E 5 HOH A 13 513 18 HOH HOH . E 5 HOH A 14 514 265 HOH HOH . E 5 HOH A 15 515 42 HOH HOH . E 5 HOH A 16 516 191 HOH HOH . E 5 HOH A 17 517 87 HOH HOH . E 5 HOH A 18 518 88 HOH HOH . E 5 HOH A 19 519 46 HOH HOH . E 5 HOH A 20 520 140 HOH HOH . E 5 HOH A 21 521 41 HOH HOH . E 5 HOH A 22 522 195 HOH HOH . E 5 HOH A 23 523 174 HOH HOH . E 5 HOH A 24 524 217 HOH HOH . E 5 HOH A 25 525 34 HOH HOH . E 5 HOH A 26 526 54 HOH HOH . E 5 HOH A 27 527 37 HOH HOH . E 5 HOH A 28 528 57 HOH HOH . E 5 HOH A 29 529 2 HOH HOH . E 5 HOH A 30 530 75 HOH HOH . E 5 HOH A 31 531 116 HOH HOH . E 5 HOH A 32 532 78 HOH HOH . E 5 HOH A 33 533 163 HOH HOH . E 5 HOH A 34 534 69 HOH HOH . E 5 HOH A 35 535 170 HOH HOH . E 5 HOH A 36 536 235 HOH HOH . E 5 HOH A 37 537 115 HOH HOH . E 5 HOH A 38 538 122 HOH HOH . E 5 HOH A 39 539 279 HOH HOH . E 5 HOH A 40 540 225 HOH HOH . E 5 HOH A 41 541 171 HOH HOH . E 5 HOH A 42 542 64 HOH HOH . E 5 HOH A 43 543 93 HOH HOH . E 5 HOH A 44 544 188 HOH HOH . E 5 HOH A 45 545 40 HOH HOH . E 5 HOH A 46 546 150 HOH HOH . E 5 HOH A 47 547 157 HOH HOH . E 5 HOH A 48 548 25 HOH HOH . E 5 HOH A 49 549 162 HOH HOH . E 5 HOH A 50 550 5 HOH HOH . E 5 HOH A 51 551 35 HOH HOH . E 5 HOH A 52 552 19 HOH HOH . E 5 HOH A 53 553 9 HOH HOH . E 5 HOH A 54 554 168 HOH HOH . E 5 HOH A 55 555 121 HOH HOH . E 5 HOH A 56 556 158 HOH HOH . E 5 HOH A 57 557 70 HOH HOH . E 5 HOH A 58 558 6 HOH HOH . E 5 HOH A 59 559 39 HOH HOH . E 5 HOH A 60 560 210 HOH HOH . E 5 HOH A 61 561 102 HOH HOH . E 5 HOH A 62 562 86 HOH HOH . E 5 HOH A 63 563 61 HOH HOH . E 5 HOH A 64 564 166 HOH HOH . E 5 HOH A 65 565 47 HOH HOH . E 5 HOH A 66 566 56 HOH HOH . E 5 HOH A 67 567 3 HOH HOH . E 5 HOH A 68 568 36 HOH HOH . E 5 HOH A 69 569 108 HOH HOH . E 5 HOH A 70 570 277 HOH HOH . E 5 HOH A 71 571 26 HOH HOH . E 5 HOH A 72 572 15 HOH HOH . E 5 HOH A 73 573 192 HOH HOH . E 5 HOH A 74 574 278 HOH HOH . E 5 HOH A 75 575 16 HOH HOH . E 5 HOH A 76 576 11 HOH HOH . E 5 HOH A 77 577 234 HOH HOH . E 5 HOH A 78 578 21 HOH HOH . E 5 HOH A 79 579 258 HOH HOH . E 5 HOH A 80 580 143 HOH HOH . E 5 HOH A 81 581 111 HOH HOH . E 5 HOH A 82 582 112 HOH HOH . E 5 HOH A 83 583 55 HOH HOH . E 5 HOH A 84 584 159 HOH HOH . E 5 HOH A 85 585 72 HOH HOH . E 5 HOH A 86 586 209 HOH HOH . E 5 HOH A 87 587 153 HOH HOH . E 5 HOH A 88 588 38 HOH HOH . E 5 HOH A 89 589 74 HOH HOH . E 5 HOH A 90 590 28 HOH HOH . E 5 HOH A 91 591 45 HOH HOH . E 5 HOH A 92 592 66 HOH HOH . E 5 HOH A 93 593 77 HOH HOH . E 5 HOH A 94 594 30 HOH HOH . E 5 HOH A 95 595 22 HOH HOH . E 5 HOH A 96 596 194 HOH HOH . E 5 HOH A 97 597 71 HOH HOH . E 5 HOH A 98 598 67 HOH HOH . E 5 HOH A 99 599 125 HOH HOH . E 5 HOH A 100 600 59 HOH HOH . E 5 HOH A 101 601 7 HOH HOH . E 5 HOH A 102 602 187 HOH HOH . E 5 HOH A 103 603 8 HOH HOH . E 5 HOH A 104 604 58 HOH HOH . E 5 HOH A 105 605 24 HOH HOH . E 5 HOH A 106 606 154 HOH HOH . E 5 HOH A 107 607 101 HOH HOH . E 5 HOH A 108 608 17 HOH HOH . E 5 HOH A 109 609 62 HOH HOH . E 5 HOH A 110 610 79 HOH HOH . E 5 HOH A 111 611 117 HOH HOH . E 5 HOH A 112 612 145 HOH HOH . E 5 HOH A 113 613 213 HOH HOH . E 5 HOH A 114 614 106 HOH HOH . E 5 HOH A 115 615 146 HOH HOH . E 5 HOH A 116 616 50 HOH HOH . E 5 HOH A 117 617 149 HOH HOH . E 5 HOH A 118 618 48 HOH HOH . E 5 HOH A 119 619 141 HOH HOH . E 5 HOH A 120 620 51 HOH HOH . E 5 HOH A 121 621 129 HOH HOH . E 5 HOH A 122 622 229 HOH HOH . E 5 HOH A 123 623 20 HOH HOH . E 5 HOH A 124 624 10 HOH HOH . E 5 HOH A 125 625 4 HOH HOH . E 5 HOH A 126 626 148 HOH HOH . E 5 HOH A 127 627 27 HOH HOH . E 5 HOH A 128 628 1 HOH HOH . E 5 HOH A 129 629 83 HOH HOH . E 5 HOH A 130 630 132 HOH HOH . E 5 HOH A 131 631 142 HOH HOH . E 5 HOH A 132 632 32 HOH HOH . E 5 HOH A 133 633 169 HOH HOH . E 5 HOH A 134 634 282 HOH HOH . E 5 HOH A 135 635 203 HOH HOH . E 5 HOH A 136 636 99 HOH HOH . E 5 HOH A 137 637 253 HOH HOH . E 5 HOH A 138 638 175 HOH HOH . E 5 HOH A 139 639 208 HOH HOH . E 5 HOH A 140 640 120 HOH HOH . E 5 HOH A 141 641 126 HOH HOH . E 5 HOH A 142 642 280 HOH HOH . E 5 HOH A 143 643 92 HOH HOH . E 5 HOH A 144 644 144 HOH HOH . E 5 HOH A 145 645 240 HOH HOH . E 5 HOH A 146 646 207 HOH HOH . E 5 HOH A 147 647 12 HOH HOH . E 5 HOH A 148 648 109 HOH HOH . E 5 HOH A 149 649 76 HOH HOH . E 5 HOH A 150 650 85 HOH HOH . E 5 HOH A 151 651 84 HOH HOH . E 5 HOH A 152 652 60 HOH HOH . E 5 HOH A 153 653 81 HOH HOH . E 5 HOH A 154 654 33 HOH HOH . E 5 HOH A 155 655 31 HOH HOH . E 5 HOH A 156 656 152 HOH HOH . E 5 HOH A 157 657 226 HOH HOH . E 5 HOH A 158 658 198 HOH HOH . E 5 HOH A 159 659 189 HOH HOH . E 5 HOH A 160 660 178 HOH HOH . E 5 HOH A 161 661 98 HOH HOH . E 5 HOH A 162 662 128 HOH HOH . E 5 HOH A 163 663 43 HOH HOH . E 5 HOH A 164 664 105 HOH HOH . E 5 HOH A 165 665 160 HOH HOH . E 5 HOH A 166 666 245 HOH HOH . E 5 HOH A 167 667 264 HOH HOH . E 5 HOH A 168 668 139 HOH HOH . E 5 HOH A 169 669 233 HOH HOH . E 5 HOH A 170 670 107 HOH HOH . E 5 HOH A 171 671 199 HOH HOH . E 5 HOH A 172 672 219 HOH HOH . E 5 HOH A 173 673 100 HOH HOH . E 5 HOH A 174 674 14 HOH HOH . E 5 HOH A 175 675 82 HOH HOH . E 5 HOH A 176 676 44 HOH HOH . E 5 HOH A 177 677 239 HOH HOH . E 5 HOH A 178 678 204 HOH HOH . E 5 HOH A 179 679 123 HOH HOH . E 5 HOH A 180 680 13 HOH HOH . E 5 HOH A 181 681 181 HOH HOH . E 5 HOH A 182 682 165 HOH HOH . E 5 HOH A 183 683 113 HOH HOH . E 5 HOH A 184 684 119 HOH HOH . E 5 HOH A 185 685 164 HOH HOH . E 5 HOH A 186 686 23 HOH HOH . E 5 HOH A 187 687 241 HOH HOH . E 5 HOH A 188 688 63 HOH HOH . E 5 HOH A 189 689 256 HOH HOH . E 5 HOH A 190 690 190 HOH HOH . E 5 HOH A 191 691 180 HOH HOH . E 5 HOH A 192 692 266 HOH HOH . E 5 HOH A 193 693 262 HOH HOH . E 5 HOH A 194 694 252 HOH HOH . E 5 HOH A 195 695 104 HOH HOH . E 5 HOH A 196 696 260 HOH HOH . E 5 HOH A 197 697 215 HOH HOH . E 5 HOH A 198 698 95 HOH HOH . E 5 HOH A 199 699 211 HOH HOH . E 5 HOH A 200 700 248 HOH HOH . E 5 HOH A 201 701 281 HOH HOH . E 5 HOH A 202 702 230 HOH HOH . E 5 HOH A 203 703 243 HOH HOH . E 5 HOH A 204 704 173 HOH HOH . E 5 HOH A 205 705 124 HOH HOH . E 5 HOH A 206 706 197 HOH HOH . E 5 HOH A 207 707 96 HOH HOH . E 5 HOH A 208 708 177 HOH HOH . E 5 HOH A 209 709 250 HOH HOH . E 5 HOH A 210 710 259 HOH HOH . E 5 HOH A 211 711 127 HOH HOH . E 5 HOH A 212 712 65 HOH HOH . E 5 HOH A 213 713 133 HOH HOH . E 5 HOH A 214 714 53 HOH HOH . E 5 HOH A 215 715 255 HOH HOH . E 5 HOH A 216 716 114 HOH HOH . E 5 HOH A 217 717 224 HOH HOH . E 5 HOH A 218 718 254 HOH HOH . E 5 HOH A 219 719 136 HOH HOH . E 5 HOH A 220 720 247 HOH HOH . E 5 HOH A 221 721 246 HOH HOH . E 5 HOH A 222 722 269 HOH HOH . E 5 HOH A 223 723 134 HOH HOH . E 5 HOH A 224 724 97 HOH HOH . E 5 HOH A 225 725 227 HOH HOH . E 5 HOH A 226 726 80 HOH HOH . E 5 HOH A 227 727 118 HOH HOH . E 5 HOH A 228 728 242 HOH HOH . E 5 HOH A 229 729 232 HOH HOH . E 5 HOH A 230 730 237 HOH HOH . E 5 HOH A 231 731 223 HOH HOH . E 5 HOH A 232 732 130 HOH HOH . E 5 HOH A 233 733 52 HOH HOH . E 5 HOH A 234 734 244 HOH HOH . E 5 HOH A 235 735 231 HOH HOH . E 5 HOH A 236 736 212 HOH HOH . E 5 HOH A 237 737 238 HOH HOH . E 5 HOH A 238 738 184 HOH HOH . E 5 HOH A 239 739 110 HOH HOH . E 5 HOH A 240 740 268 HOH HOH . E 5 HOH A 241 741 201 HOH HOH . E 5 HOH A 242 742 179 HOH HOH . E 5 HOH A 243 743 257 HOH HOH . E 5 HOH A 244 744 196 HOH HOH . E 5 HOH A 245 745 205 HOH HOH . E 5 HOH A 246 746 218 HOH HOH . E 5 HOH A 247 747 135 HOH HOH . E 5 HOH A 248 748 221 HOH HOH . E 5 HOH A 249 749 193 HOH HOH . E 5 HOH A 250 750 249 HOH HOH . E 5 HOH A 251 751 137 HOH HOH . E 5 HOH A 252 752 267 HOH HOH . E 5 HOH A 253 753 183 HOH HOH . E 5 HOH A 254 754 103 HOH HOH . E 5 HOH A 255 755 236 HOH HOH . E 5 HOH A 256 756 94 HOH HOH . E 5 HOH A 257 757 138 HOH HOH . E 5 HOH A 258 758 156 HOH HOH . E 5 HOH A 259 759 89 HOH HOH . E 5 HOH A 260 760 73 HOH HOH . E 5 HOH A 261 761 222 HOH HOH . E 5 HOH A 262 762 220 HOH HOH . E 5 HOH A 263 763 274 HOH HOH . E 5 HOH A 264 764 272 HOH HOH . E 5 HOH A 265 765 214 HOH HOH . E 5 HOH A 266 766 186 HOH HOH . E 5 HOH A 267 767 182 HOH HOH . E 5 HOH A 268 768 155 HOH HOH . E 5 HOH A 269 769 68 HOH HOH . E 5 HOH A 270 770 167 HOH HOH . E 5 HOH A 271 771 206 HOH HOH . E 5 HOH A 272 772 200 HOH HOH . E 5 HOH A 273 773 176 HOH HOH . E 5 HOH A 274 774 147 HOH HOH . E 5 HOH A 275 775 275 HOH HOH . E 5 HOH A 276 776 271 HOH HOH . E 5 HOH A 277 777 270 HOH HOH . E 5 HOH A 278 778 251 HOH HOH . E 5 HOH A 279 779 90 HOH HOH . E 5 HOH A 280 780 151 HOH HOH . E 5 HOH A 281 781 273 HOH HOH . E 5 HOH A 282 782 216 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . B 2 5.97 -9.596 26.932 1 20.68 ? PB GDP 401 A 1 HETATM 2 O O1B GDP . . . B 2 6.832 -8.391 27.092 1 19.34 ? O1B GDP 401 A 1 HETATM 3 O O2B GDP . . . B 2 6.487 -10.783 27.667 1 25.64 ? O2B GDP 401 A 1 HETATM 4 O O3B GDP . . . B 2 4.569 -9.268 27.377 1 24.5 ? O3B GDP 401 A 1 HETATM 5 O O3A GDP . . . B 2 5.88 -10.038 25.368 1 18.03 ? O3A GDP 401 A 1 HETATM 6 P PA GDP . . . B 2 5.839 -9.015 24.137 1 19.11 ? PA GDP 401 A 1 HETATM 7 O O1A GDP . . . B 2 7.21 -8.572 23.712 1 18.25 ? O1A GDP 401 A 1 HETATM 8 O O2A GDP . . . B 2 4.854 -7.881 24.353 1 19.42 ? O2A GDP 401 A 1 HETATM 9 O O5' GDP . . . B 2 5.272 -10.046 23.051 1 18.49 ? O5' GDP 401 A 1 HETATM 10 C C5' GDP . . . B 2 3.969 -10.617 23.156 1 17.27 ? C5' GDP 401 A 1 HETATM 11 C C4' GDP . . . B 2 3.326 -10.706 21.759 1 18.62 ? C4' GDP 401 A 1 HETATM 12 O O4' GDP . . . B 2 3.042 -9.399 21.269 1 17.92 ? O4' GDP 401 A 1 HETATM 13 C C3' GDP . . . B 2 4.24 -11.325 20.714 1 23.03 ? C3' GDP 401 A 1 HETATM 14 O O3' GDP . . . B 2 4.047 -12.734 20.706 1 25.84 ? O3' GDP 401 A 1 HETATM 15 C C2' GDP . . . B 2 3.752 -10.723 19.419 1 22.64 ? C2' GDP 401 A 1 HETATM 16 O O2' GDP . . . B 2 2.537 -11.371 19.016 1 20.14 ? O2' GDP 401 A 1 HETATM 17 C C1' GDP . . . B 2 3.272 -9.361 19.825 1 17.68 ? C1' GDP 401 A 1 HETATM 18 N N9 GDP . . . B 2 4.122 -8.171 19.644 1 17.87 ? N9 GDP 401 A 1 HETATM 19 C C8 GDP . . . B 2 5.255 -7.823 20.293 1 18.25 ? C8 GDP 401 A 1 HETATM 20 N N7 GDP . . . B 2 5.638 -6.575 19.941 1 18.82 ? N7 GDP 401 A 1 HETATM 21 C C5 GDP . . . B 2 4.718 -6.128 19.072 1 18.81 ? C5 GDP 401 A 1 HETATM 22 C C6 GDP . . . B 2 4.489 -4.895 18.327 1 16.7 ? C6 GDP 401 A 1 HETATM 23 O O6 GDP . . . B 2 5.309 -3.959 18.446 1 19.85 ? O6 GDP 401 A 1 HETATM 24 N N1 GDP . . . B 2 3.403 -4.808 17.548 1 16.96 ? N1 GDP 401 A 1 HETATM 25 C C2 GDP . . . B 2 2.507 -5.803 17.409 1 15.74 ? C2 GDP 401 A 1 HETATM 26 N N2 GDP . . . B 2 1.431 -5.632 16.593 1 17.24 ? N2 GDP 401 A 1 HETATM 27 N N3 GDP . . . B 2 2.646 -6.972 18.084 1 17.47 ? N3 GDP 401 A 1 HETATM 28 C C4 GDP . . . B 2 3.71 -7.166 18.898 1 17.46 ? C4 GDP 401 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #