data_7OJI
#
_model_server_result.job_id            pJ_aYpBaeITaARddNc-1OQ 
_model_server_result.datetime_utc      '2025-08-31 01:39:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7oji 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    7OJI 
#
_exptl.entry_id    7OJI 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              421.446 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OJI 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OJI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 602 A CYS 592 1_555 A SG CYS 618 A CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 613 A CYS 603 1_555 B SG CYS 613 B CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf3 B SG CYS 602 B CYS 592 1_555 B SG CYS 618 B CYS 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C23 H23 N3 O5' 
_chem_comp.formula_weight    421.446 
_chem_comp.id                TTC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'TOPOTECAN, HYCAMTIN' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C25 C31 TTC sing 564 n n 
C25 C21 TTC sing 565 n n 
C25 H251 TTC sing 566 n n 
C25 H252 TTC sing 567 n n 
C31 H311 TTC sing 568 n n 
C31 H312 TTC sing 569 n n 
C31 H313 TTC sing 570 n n 
C21 O24 TTC sing 571 n n 
C21 C16 TTC sing 572 n n 
C21 C20 TTC sing 573 n n 
O24 H241 TTC sing 574 n n 
C16 C15 TTC doub 575 n y 
C16 C17 TTC sing 576 n y 
C20 O23 TTC doub 577 n n 
C20 O22 TTC sing 578 n n 
C15 C14 TTC sing 579 n y 
C15 C19 TTC sing 580 n n 
C17 C13 TTC doub 581 n y 
C17 H171 TTC sing 582 n n 
O22 C19 TTC sing 583 n n 
C14 O18 TTC doub 584 n n 
C14 N12 TTC sing 585 n y 
C19 H191 TTC sing 586 n n 
C19 H192 TTC sing 587 n n 
C13 N12 TTC sing 588 n y 
C13 C9 TTC sing 589 n y 
N12 C11 TTC sing 590 n n 
C9 C8 TTC doub 591 n y 
C9 N10 TTC sing 592 n y 
C11 C8 TTC sing 593 n n 
C11 H111 TTC sing 594 n n 
C11 H112 TTC sing 595 n n 
C8 C7 TTC sing 596 n y 
N10 C5 TTC doub 597 n y 
C7 C6 TTC doub 598 n y 
C7 H71 TTC sing 599 n n 
C5 C6 TTC sing 600 n y 
C5 C4 TTC sing 601 n y 
C6 C1 TTC sing 602 n y 
C4 C3 TTC doub 603 n y 
C4 H41 TTC sing 604 n n 
C1 C2 TTC doub 605 n y 
C1 C27 TTC sing 606 n n 
C3 C2 TTC sing 607 n y 
C3 H31 TTC sing 608 n n 
C2 O26 TTC sing 609 n n 
C27 N28 TTC sing 610 n n 
C27 H271 TTC sing 611 n n 
C27 H272 TTC sing 612 n n 
N28 C29 TTC sing 613 n n 
N28 C30 TTC sing 614 n n 
C29 H291 TTC sing 615 n n 
C29 H292 TTC sing 616 n n 
C29 H293 TTC sing 617 n n 
C30 H301 TTC sing 618 n n 
C30 H302 TTC sing 619 n n 
C30 H303 TTC sing 620 n n 
O26 H261 TTC sing 621 n n 
#
_atom_sites.entry_id                     7OJI 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 TTC A 1 701 701 TTC LIG . 
D 3 CLR A 1 702 1801 CLR CLR . 
E 4 PLC A 1 703 1802 PLC PLC . 
F 3 CLR A 1 704 1901 CLR CLR . 
G 5 ATP A 1 705 1501 ATP ATP . 
H 3 CLR B 1 701 1602 CLR CLR . 
I 3 CLR B 1 702 1701 CLR CLR . 
J 4 PLC B 1 703 1702 PLC PLC . 
K 5 ATP B 1 704 1502 ATP ATP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C25 TTC . . . C 2 113.963 126.1 116.969 1 20 ? C25 TTC 701 A 1 
HETATM 2 C C31 TTC . . . C 2 114.024 125.785 118.578 1 20 ? C31 TTC 701 A 1 
HETATM 3 C C21 TTC . . . C 2 114.717 125.037 116.048 1 20 ? C21 TTC 701 A 1 
HETATM 4 O O24 TTC . . . C 2 114.665 123.859 116.919 1 20 ? O24 TTC 701 A 1 
HETATM 5 C C16 TTC . . . C 2 116.149 125.316 115.925 1 20 ? C16 TTC 701 A 1 
HETATM 6 C C20 TTC . . . C 2 114.063 124.446 114.669 1 20 ? C20 TTC 701 A 1 
HETATM 7 C C15 TTC . . . C 2 116.929 125.201 114.597 1 20 ? C15 TTC 701 A 1 
HETATM 8 C C17 TTC . . . C 2 116.891 125.673 117.304 1 20 ? C17 TTC 701 A 1 
HETATM 9 O O23 TTC . . . C 2 113.113 123.664 114.712 1 20 ? O23 TTC 701 A 1 
HETATM 10 O O22 TTC . . . C 2 114.692 124.866 113.382 1 20 ? O22 TTC 701 A 1 
HETATM 11 C C14 TTC . . . C 2 118.521 125.465 114.515 1 20 ? C14 TTC 701 A 1 
HETATM 12 C C19 TTC . . . C 2 116.233 124.834 113.25 1 20 ? C19 TTC 701 A 1 
HETATM 13 C C13 TTC . . . C 2 118.409 125.9 117.1 1 20 ? C13 TTC 701 A 1 
HETATM 14 O O18 TTC . . . C 2 119.202 125.39 113.473 1 20 ? O18 TTC 701 A 1 
HETATM 15 N N12 TTC . . . C 2 119.16 125.802 115.823 1 20 ? N12 TTC 701 A 1 
HETATM 16 C C9 TTC . . . C 2 119.414 126.27 118.288 1 20 ? C9 TTC 701 A 1 
HETATM 17 C C11 TTC . . . C 2 120.639 126.102 116.108 1 20 ? C11 TTC 701 A 1 
HETATM 18 C C8 TTC . . . C 2 120.701 126.395 117.719 1 20 ? C8 TTC 701 A 1 
HETATM 19 N N10 TTC . . . C 2 119.035 126.44 119.658 1 20 ? N10 TTC 701 A 1 
HETATM 20 C C7 TTC . . . C 2 121.782 126.739 118.656 1 20 ? C7 TTC 701 A 1 
HETATM 21 C C5 TTC . . . C 2 120.037 126.779 120.556 1 20 ? C5 TTC 701 A 1 
HETATM 22 C C6 TTC . . . C 2 121.378 126.934 120.108 1 20 ? C6 TTC 701 A 1 
HETATM 23 C C4 TTC . . . C 2 119.656 126.969 122.013 1 20 ? C4 TTC 701 A 1 
HETATM 24 C C1 TTC . . . C 2 122.468 127.3 121.095 1 20 ? C1 TTC 701 A 1 
HETATM 25 C C3 TTC . . . C 2 120.697 127.322 122.953 1 20 ? C3 TTC 701 A 1 
HETATM 26 C C2 TTC . . . C 2 122.136 127.483 122.493 1 20 ? C2 TTC 701 A 1 
HETATM 27 C C27 TTC . . . C 2 123.973 127.41 120.428 1 20 ? C27 TTC 701 A 1 
HETATM 28 N N28 TTC . . . C 2 124.356 125.983 119.952 1 20 ? N28 TTC 701 A 1 
HETATM 29 C C29 TTC . . . C 2 125.28 125.309 120.941 1 20 ? C29 TTC 701 A 1 
HETATM 30 C C30 TTC . . . C 2 125.022 125.917 118.591 1 20 ? C30 TTC 701 A 1 
HETATM 31 O O26 TTC . . . C 2 123.127 127.82 123.5 1 20 ? O26 TTC 701 A 1 
HETATM 32 H H251 TTC . . . C 2 114.403 127.075 116.796 1 20 ? H251 TTC 701 A 1 
HETATM 33 H H252 TTC . . . C 2 112.924 126.136 116.668 1 20 ? H252 TTC 701 A 1 
HETATM 34 H H311 TTC . . . C 2 113.247 126.344 119.084 1 20 ? H311 TTC 701 A 1 
HETATM 35 H H312 TTC . . . C 2 113.874 124.726 118.744 1 20 ? H312 TTC 701 A 1 
HETATM 36 H H313 TTC . . . C 2 114.99 126.078 118.967 1 20 ? H313 TTC 701 A 1 
HETATM 37 H H241 TTC . . . C 2 113.771 123.569 117.003 1 20 ? H241 TTC 701 A 1 
HETATM 38 H H171 TTC . . . C 2 116.428 125.753 118.272 1 20 ? H171 TTC 701 A 1 
HETATM 39 H H191 TTC . . . C 2 116.54 123.838 112.955 1 20 ? H191 TTC 701 A 1 
HETATM 40 H H192 TTC . . . C 2 116.537 125.544 112.492 1 20 ? H192 TTC 701 A 1 
HETATM 41 H H111 TTC . . . C 2 121.252 125.245 115.857 1 20 ? H111 TTC 701 A 1 
HETATM 42 H H112 TTC . . . C 2 120.959 126.977 115.555 1 20 ? H112 TTC 701 A 1 
HETATM 43 H H71 TTC . . . C 2 122.8 126.865 118.319 1 20 ? H71 TTC 701 A 1 
HETATM 44 H H41 TTC . . . C 2 118.631 126.847 122.338 1 20 ? H41 TTC 701 A 1 
HETATM 45 H H31 TTC . . . C 2 120.451 127.452 124 1 20 ? H31 TTC 701 A 1 
HETATM 46 H H271 TTC . . . C 2 124.682 127.758 121.17 1 20 ? H271 TTC 701 A 1 
HETATM 47 H H272 TTC . . . C 2 123.955 128.09 119.586 1 20 ? H272 TTC 701 A 1 
HETATM 48 H H291 TTC . . . C 2 124.929 124.303 121.136 1 20 ? H291 TTC 701 A 1 
HETATM 49 H H292 TTC . . . C 2 125.294 125.872 121.866 1 20 ? H292 TTC 701 A 1 
HETATM 50 H H293 TTC . . . C 2 126.28 125.268 120.53 1 20 ? H293 TTC 701 A 1 
HETATM 51 H H301 TTC . . . C 2 124.539 125.157 117.99 1 20 ? H301 TTC 701 A 1 
HETATM 52 H H302 TTC . . . C 2 124.932 126.877 118.098 1 20 ? H302 TTC 701 A 1 
HETATM 53 H H303 TTC . . . C 2 126.069 125.671 118.712 1 20 ? H303 TTC 701 A 1 
HETATM 54 H H261 TTC . . . C 2 122.726 128.341 124.174 1 20 ? H261 TTC 701 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           430 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           54 
#