data_7OKH
#
_model_server_result.job_id            nXZlrNWcI7dAZAV-Rk0EHQ 
_model_server_result.datetime_utc      '2024-11-25 06:00:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7okh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":206}' 
#
_entry.id    7OKH 
#
_exptl.entry_id    7OKH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7OKH 
_cell.length_a            67.579 
_cell.length_b            67.579 
_cell.length_c            165.614 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OKH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 33.7895 -58.525131 27.602333 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 J N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7OKH 
_atom_sites.fract_transf_matrix[1][1]    0.014797 
_atom_sites.fract_transf_matrix[1][2]    0.008543 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017087 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006038 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 VHK A 1 201 200 VHK 003 . 
D 4 EDO A 1 202 2 EDO EDO . 
E 4 EDO A 1 203 3 EDO EDO . 
F 4 EDO A 1 204 4 EDO EDO . 
G 4 EDO A 1 205 5 EDO EDO . 
H 4 EDO A 1 206 6 EDO EDO . 
I 5 CL A 1 207 1 CL CL . 
J 4 EDO B 1 101 1 EDO EDO . 
K 6 HOH A 1 301 204 HOH HOH . 
K 6 HOH A 2 302 148 HOH HOH . 
K 6 HOH A 3 303 160 HOH HOH . 
K 6 HOH A 4 304 20 HOH HOH . 
K 6 HOH A 5 305 139 HOH HOH . 
K 6 HOH A 6 306 89 HOH HOH . 
K 6 HOH A 7 307 13 HOH HOH . 
K 6 HOH A 8 308 11 HOH HOH . 
K 6 HOH A 9 309 175 HOH HOH . 
K 6 HOH A 10 310 169 HOH HOH . 
K 6 HOH A 11 311 46 HOH HOH . 
K 6 HOH A 12 312 82 HOH HOH . 
K 6 HOH A 13 313 33 HOH HOH . 
K 6 HOH A 14 314 42 HOH HOH . 
K 6 HOH A 15 315 214 HOH HOH . 
K 6 HOH A 16 316 92 HOH HOH . 
K 6 HOH A 17 317 153 HOH HOH . 
K 6 HOH A 18 318 17 HOH HOH . 
K 6 HOH A 19 319 159 HOH HOH . 
K 6 HOH A 20 320 69 HOH HOH . 
K 6 HOH A 21 321 16 HOH HOH . 
K 6 HOH A 22 322 105 HOH HOH . 
K 6 HOH A 23 323 151 HOH HOH . 
K 6 HOH A 24 324 74 HOH HOH . 
K 6 HOH A 25 325 110 HOH HOH . 
K 6 HOH A 26 326 24 HOH HOH . 
K 6 HOH A 27 327 9 HOH HOH . 
K 6 HOH A 28 328 121 HOH HOH . 
K 6 HOH A 29 329 205 HOH HOH . 
K 6 HOH A 30 330 200 HOH HOH . 
K 6 HOH A 31 331 165 HOH HOH . 
K 6 HOH A 32 332 118 HOH HOH . 
K 6 HOH A 33 333 86 HOH HOH . 
K 6 HOH A 34 334 21 HOH HOH . 
K 6 HOH A 35 335 167 HOH HOH . 
K 6 HOH A 36 336 91 HOH HOH . 
K 6 HOH A 37 337 44 HOH HOH . 
K 6 HOH A 38 338 147 HOH HOH . 
K 6 HOH A 39 339 40 HOH HOH . 
K 6 HOH A 40 340 123 HOH HOH . 
K 6 HOH A 41 341 203 HOH HOH . 
K 6 HOH A 42 342 103 HOH HOH . 
K 6 HOH A 43 343 143 HOH HOH . 
K 6 HOH A 44 344 25 HOH HOH . 
K 6 HOH A 45 345 220 HOH HOH . 
K 6 HOH A 46 346 79 HOH HOH . 
K 6 HOH A 47 347 88 HOH HOH . 
K 6 HOH A 48 348 186 HOH HOH . 
K 6 HOH A 49 349 62 HOH HOH . 
K 6 HOH A 50 350 8 HOH HOH . 
K 6 HOH A 51 351 212 HOH HOH . 
K 6 HOH A 52 352 150 HOH HOH . 
K 6 HOH A 53 353 142 HOH HOH . 
K 6 HOH A 54 354 108 HOH HOH . 
K 6 HOH A 55 355 126 HOH HOH . 
K 6 HOH A 56 356 178 HOH HOH . 
K 6 HOH A 57 357 49 HOH HOH . 
K 6 HOH A 58 358 36 HOH HOH . 
K 6 HOH A 59 359 28 HOH HOH . 
K 6 HOH A 60 360 61 HOH HOH . 
K 6 HOH A 61 361 64 HOH HOH . 
K 6 HOH A 62 362 51 HOH HOH . 
K 6 HOH A 63 363 3 HOH HOH . 
K 6 HOH A 64 364 76 HOH HOH . 
K 6 HOH A 65 365 171 HOH HOH . 
K 6 HOH A 66 366 93 HOH HOH . 
K 6 HOH A 67 367 22 HOH HOH . 
K 6 HOH A 68 368 70 HOH HOH . 
K 6 HOH A 69 369 23 HOH HOH . 
K 6 HOH A 70 370 7 HOH HOH . 
K 6 HOH A 71 371 15 HOH HOH . 
K 6 HOH A 72 372 166 HOH HOH . 
K 6 HOH A 73 373 54 HOH HOH . 
K 6 HOH A 74 374 2 HOH HOH . 
K 6 HOH A 75 375 37 HOH HOH . 
K 6 HOH A 76 376 26 HOH HOH . 
K 6 HOH A 77 377 41 HOH HOH . 
K 6 HOH A 78 378 59 HOH HOH . 
K 6 HOH A 79 379 4 HOH HOH . 
K 6 HOH A 80 380 111 HOH HOH . 
K 6 HOH A 81 381 180 HOH HOH . 
K 6 HOH A 82 382 75 HOH HOH . 
K 6 HOH A 83 383 117 HOH HOH . 
K 6 HOH A 84 384 188 HOH HOH . 
K 6 HOH A 85 385 119 HOH HOH . 
K 6 HOH A 86 386 57 HOH HOH . 
K 6 HOH A 87 387 94 HOH HOH . 
K 6 HOH A 88 388 12 HOH HOH . 
K 6 HOH A 89 389 1 HOH HOH . 
K 6 HOH A 90 390 198 HOH HOH . 
K 6 HOH A 91 391 71 HOH HOH . 
K 6 HOH A 92 392 5 HOH HOH . 
K 6 HOH A 93 393 52 HOH HOH . 
K 6 HOH A 94 394 45 HOH HOH . 
K 6 HOH A 95 395 72 HOH HOH . 
K 6 HOH A 96 396 184 HOH HOH . 
K 6 HOH A 97 397 190 HOH HOH . 
K 6 HOH A 98 398 29 HOH HOH . 
K 6 HOH A 99 399 65 HOH HOH . 
K 6 HOH A 100 400 193 HOH HOH . 
K 6 HOH A 101 401 19 HOH HOH . 
K 6 HOH A 102 402 50 HOH HOH . 
K 6 HOH A 103 403 149 HOH HOH . 
K 6 HOH A 104 404 156 HOH HOH . 
K 6 HOH A 105 405 181 HOH HOH . 
K 6 HOH A 106 406 145 HOH HOH . 
K 6 HOH A 107 407 134 HOH HOH . 
K 6 HOH A 108 408 32 HOH HOH . 
K 6 HOH A 109 409 30 HOH HOH . 
K 6 HOH A 110 410 35 HOH HOH . 
K 6 HOH A 111 411 34 HOH HOH . 
K 6 HOH A 112 412 39 HOH HOH . 
K 6 HOH A 113 413 66 HOH HOH . 
K 6 HOH A 114 414 60 HOH HOH . 
K 6 HOH A 115 415 172 HOH HOH . 
K 6 HOH A 116 416 114 HOH HOH . 
K 6 HOH A 117 417 164 HOH HOH . 
K 6 HOH A 118 418 78 HOH HOH . 
K 6 HOH A 119 419 77 HOH HOH . 
K 6 HOH A 120 420 81 HOH HOH . 
K 6 HOH A 121 421 10 HOH HOH . 
K 6 HOH A 122 422 90 HOH HOH . 
K 6 HOH A 123 423 43 HOH HOH . 
K 6 HOH A 124 424 48 HOH HOH . 
K 6 HOH A 125 425 85 HOH HOH . 
K 6 HOH A 126 426 137 HOH HOH . 
K 6 HOH A 127 427 38 HOH HOH . 
K 6 HOH A 128 428 216 HOH HOH . 
K 6 HOH A 129 429 87 HOH HOH . 
K 6 HOH A 130 430 163 HOH HOH . 
K 6 HOH A 131 431 68 HOH HOH . 
K 6 HOH A 132 432 27 HOH HOH . 
K 6 HOH A 133 433 177 HOH HOH . 
K 6 HOH A 134 434 63 HOH HOH . 
K 6 HOH A 135 435 104 HOH HOH . 
K 6 HOH A 136 436 80 HOH HOH . 
K 6 HOH A 137 437 208 HOH HOH . 
K 6 HOH A 138 438 199 HOH HOH . 
K 6 HOH A 139 439 215 HOH HOH . 
K 6 HOH A 140 440 97 HOH HOH . 
K 6 HOH A 141 441 53 HOH HOH . 
K 6 HOH A 142 442 73 HOH HOH . 
K 6 HOH A 143 443 47 HOH HOH . 
K 6 HOH A 144 444 115 HOH HOH . 
K 6 HOH A 145 445 102 HOH HOH . 
K 6 HOH A 146 446 127 HOH HOH . 
K 6 HOH A 147 447 84 HOH HOH . 
K 6 HOH A 148 448 174 HOH HOH . 
K 6 HOH A 149 449 197 HOH HOH . 
K 6 HOH A 150 450 201 HOH HOH . 
K 6 HOH A 151 451 83 HOH HOH . 
K 6 HOH A 152 452 112 HOH HOH . 
K 6 HOH A 153 453 99 HOH HOH . 
K 6 HOH A 154 454 132 HOH HOH . 
K 6 HOH A 155 455 158 HOH HOH . 
K 6 HOH A 156 456 157 HOH HOH . 
K 6 HOH A 157 457 128 HOH HOH . 
K 6 HOH A 158 458 131 HOH HOH . 
K 6 HOH A 159 459 168 HOH HOH . 
K 6 HOH A 160 460 195 HOH HOH . 
K 6 HOH A 161 461 95 HOH HOH . 
K 6 HOH A 162 462 55 HOH HOH . 
K 6 HOH A 163 463 106 HOH HOH . 
K 6 HOH A 164 464 194 HOH HOH . 
K 6 HOH A 165 465 113 HOH HOH . 
K 6 HOH A 166 466 120 HOH HOH . 
K 6 HOH A 167 467 218 HOH HOH . 
K 6 HOH A 168 468 217 HOH HOH . 
K 6 HOH A 169 469 101 HOH HOH . 
K 6 HOH A 170 470 173 HOH HOH . 
K 6 HOH A 171 471 211 HOH HOH . 
K 6 HOH A 172 472 179 HOH HOH . 
K 6 HOH A 173 473 189 HOH HOH . 
K 6 HOH A 174 474 154 HOH HOH . 
K 6 HOH A 175 475 135 HOH HOH . 
K 6 HOH A 176 476 162 HOH HOH . 
K 6 HOH A 177 477 155 HOH HOH . 
K 6 HOH A 178 478 176 HOH HOH . 
K 6 HOH A 179 479 183 HOH HOH . 
K 6 HOH A 180 480 138 HOH HOH . 
K 6 HOH A 181 481 152 HOH HOH . 
K 6 HOH A 182 482 213 HOH HOH . 
K 6 HOH A 183 483 144 HOH HOH . 
K 6 HOH A 184 484 136 HOH HOH . 
K 6 HOH A 185 485 129 HOH HOH . 
K 6 HOH A 186 486 170 HOH HOH . 
K 6 HOH A 187 487 130 HOH HOH . 
K 6 HOH A 188 488 191 HOH HOH . 
K 6 HOH A 189 489 219 HOH HOH . 
K 6 HOH A 190 490 209 HOH HOH . 
K 6 HOH A 191 491 124 HOH HOH . 
K 6 HOH A 192 492 207 HOH HOH . 
K 6 HOH A 193 493 210 HOH HOH . 
L 6 HOH B 1 201 14 HOH HOH . 
L 6 HOH B 2 202 67 HOH HOH . 
L 6 HOH B 3 203 116 HOH HOH . 
L 6 HOH B 4 204 31 HOH HOH . 
L 6 HOH B 5 205 56 HOH HOH . 
L 6 HOH B 6 206 202 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . A . H 4 32 -33.01 14.303 0.35 18.47 ? C1 EDO 206 A 1 
HETATM 2 C C1 EDO . B . H 4 32.334 -32.916 14.553 0.64 62.6 ? C1 EDO 206 A 1 
HETATM 3 O O1 EDO . A . H 4 32.015 -31.718 14.878 0.35 18.83 ? O1 EDO 206 A 1 
HETATM 4 O O1 EDO . B . H 4 32.806 -34.138 15.093 0.64 62.5 ? O1 EDO 206 A 1 
HETATM 5 C C2 EDO . A . H 4 32.446 -32.917 12.828 0.35 15.98 ? C2 EDO 206 A 1 
HETATM 6 C C2 EDO . B . H 4 32.464 -32.934 13.014 0.64 62.37 ? C2 EDO 206 A 1 
HETATM 7 O O2 EDO . A . H 4 33.857 -32.903 12.716 0.35 16.73 ? O2 EDO 206 A 1 
HETATM 8 O O2 EDO . B . H 4 33.835 -32.938 12.648 0.64 62.07 ? O2 EDO 206 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#