data_7OKM
#
_model_server_result.job_id            5OFRCJ0V2Z_BVRs1L3O_Kg 
_model_server_result.datetime_utc      '2024-10-19 14:18:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7okm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    7OKM 
#
_exptl.entry_id    7OKM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7OKM 
_cell.length_a            68.49 
_cell.length_b            68.49 
_cell.length_c            167.476 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OKM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 
A,B,C,D,E,F,G,H,I,J,K,L,M 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 34.245 -59.31408 27.912667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 K N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 92 n n 
C1 C2 EDO sing 93 n n 
C1 H11 EDO sing 94 n n 
C1 H12 EDO sing 95 n n 
O1 HO1 EDO sing 96 n n 
C2 O2 EDO sing 97 n n 
C2 H21 EDO sing 98 n n 
C2 H22 EDO sing 99 n n 
O2 HO2 EDO sing 100 n n 
#
_atom_sites.entry_id                     7OKM 
_atom_sites.fract_transf_matrix[1][1]    0.014601 
_atom_sites.fract_transf_matrix[1][2]    0.00843 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016859 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005971 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 VJ2 A 1 201 200 VJ2 096 . 
D 4 EDO A 1 202 2 EDO EDO . 
E 4 EDO A 1 203 3 EDO EDO . 
F 4 EDO A 1 204 4 EDO EDO . 
G 4 EDO A 1 205 5 EDO EDO . 
H 4 EDO A 1 206 6 EDO EDO . 
I 5 DMS A 1 207 1 DMS DMS . 
J 6 CL A 1 208 1 CL CL . 
K 4 EDO B 1 101 1 EDO EDO . 
L 7 HOH A 1 301 233 HOH HOH . 
L 7 HOH A 2 302 198 HOH HOH . 
L 7 HOH A 3 303 186 HOH HOH . 
L 7 HOH A 4 304 89 HOH HOH . 
L 7 HOH A 5 305 69 HOH HOH . 
L 7 HOH A 6 306 53 HOH HOH . 
L 7 HOH A 7 307 92 HOH HOH . 
L 7 HOH A 8 308 128 HOH HOH . 
L 7 HOH A 9 309 231 HOH HOH . 
L 7 HOH A 10 310 133 HOH HOH . 
L 7 HOH A 11 311 10 HOH HOH . 
L 7 HOH A 12 312 67 HOH HOH . 
L 7 HOH A 13 313 230 HOH HOH . 
L 7 HOH A 14 314 181 HOH HOH . 
L 7 HOH A 15 315 126 HOH HOH . 
L 7 HOH A 16 316 60 HOH HOH . 
L 7 HOH A 17 317 100 HOH HOH . 
L 7 HOH A 18 318 125 HOH HOH . 
L 7 HOH A 19 319 84 HOH HOH . 
L 7 HOH A 20 320 25 HOH HOH . 
L 7 HOH A 21 321 196 HOH HOH . 
L 7 HOH A 22 322 278 HOH HOH . 
L 7 HOH A 23 323 202 HOH HOH . 
L 7 HOH A 24 324 185 HOH HOH . 
L 7 HOH A 25 325 77 HOH HOH . 
L 7 HOH A 26 326 72 HOH HOH . 
L 7 HOH A 27 327 80 HOH HOH . 
L 7 HOH A 28 328 90 HOH HOH . 
L 7 HOH A 29 329 192 HOH HOH . 
L 7 HOH A 30 330 218 HOH HOH . 
L 7 HOH A 31 331 94 HOH HOH . 
L 7 HOH A 32 332 43 HOH HOH . 
L 7 HOH A 33 333 34 HOH HOH . 
L 7 HOH A 34 334 175 HOH HOH . 
L 7 HOH A 35 335 4 HOH HOH . 
L 7 HOH A 36 336 124 HOH HOH . 
L 7 HOH A 37 337 23 HOH HOH . 
L 7 HOH A 38 338 81 HOH HOH . 
L 7 HOH A 39 339 109 HOH HOH . 
L 7 HOH A 40 340 115 HOH HOH . 
L 7 HOH A 41 341 27 HOH HOH . 
L 7 HOH A 42 342 180 HOH HOH . 
L 7 HOH A 43 343 114 HOH HOH . 
L 7 HOH A 44 344 54 HOH HOH . 
L 7 HOH A 45 345 13 HOH HOH . 
L 7 HOH A 46 346 167 HOH HOH . 
L 7 HOH A 47 347 70 HOH HOH . 
L 7 HOH A 48 348 277 HOH HOH . 
L 7 HOH A 49 349 15 HOH HOH . 
L 7 HOH A 50 350 267 HOH HOH . 
L 7 HOH A 51 351 1 HOH HOH . 
L 7 HOH A 52 352 113 HOH HOH . 
L 7 HOH A 53 353 73 HOH HOH . 
L 7 HOH A 54 354 166 HOH HOH . 
L 7 HOH A 55 355 32 HOH HOH . 
L 7 HOH A 56 356 269 HOH HOH . 
L 7 HOH A 57 357 14 HOH HOH . 
L 7 HOH A 58 358 11 HOH HOH . 
L 7 HOH A 59 359 95 HOH HOH . 
L 7 HOH A 60 360 272 HOH HOH . 
L 7 HOH A 61 361 103 HOH HOH . 
L 7 HOH A 62 362 5 HOH HOH . 
L 7 HOH A 63 363 79 HOH HOH . 
L 7 HOH A 64 364 183 HOH HOH . 
L 7 HOH A 65 365 260 HOH HOH . 
L 7 HOH A 66 366 46 HOH HOH . 
L 7 HOH A 67 367 117 HOH HOH . 
L 7 HOH A 68 368 107 HOH HOH . 
L 7 HOH A 69 369 147 HOH HOH . 
L 7 HOH A 70 370 9 HOH HOH . 
L 7 HOH A 71 371 2 HOH HOH . 
L 7 HOH A 72 372 17 HOH HOH . 
L 7 HOH A 73 373 108 HOH HOH . 
L 7 HOH A 74 374 265 HOH HOH . 
L 7 HOH A 75 375 156 HOH HOH . 
L 7 HOH A 76 376 38 HOH HOH . 
L 7 HOH A 77 377 140 HOH HOH . 
L 7 HOH A 78 378 83 HOH HOH . 
L 7 HOH A 79 379 205 HOH HOH . 
L 7 HOH A 80 380 172 HOH HOH . 
L 7 HOH A 81 381 35 HOH HOH . 
L 7 HOH A 82 382 159 HOH HOH . 
L 7 HOH A 83 383 55 HOH HOH . 
L 7 HOH A 84 384 31 HOH HOH . 
L 7 HOH A 85 385 261 HOH HOH . 
L 7 HOH A 86 386 7 HOH HOH . 
L 7 HOH A 87 387 51 HOH HOH . 
L 7 HOH A 88 388 164 HOH HOH . 
L 7 HOH A 89 389 276 HOH HOH . 
L 7 HOH A 90 390 62 HOH HOH . 
L 7 HOH A 91 391 168 HOH HOH . 
L 7 HOH A 92 392 112 HOH HOH . 
L 7 HOH A 93 393 45 HOH HOH . 
L 7 HOH A 94 394 37 HOH HOH . 
L 7 HOH A 95 395 111 HOH HOH . 
L 7 HOH A 96 396 118 HOH HOH . 
L 7 HOH A 97 397 16 HOH HOH . 
L 7 HOH A 98 398 49 HOH HOH . 
L 7 HOH A 99 399 86 HOH HOH . 
L 7 HOH A 100 400 274 HOH HOH . 
L 7 HOH A 101 401 249 HOH HOH . 
L 7 HOH A 102 402 93 HOH HOH . 
L 7 HOH A 103 403 259 HOH HOH . 
L 7 HOH A 104 404 59 HOH HOH . 
L 7 HOH A 105 405 203 HOH HOH . 
L 7 HOH A 106 406 88 HOH HOH . 
L 7 HOH A 107 407 26 HOH HOH . 
L 7 HOH A 108 408 44 HOH HOH . 
L 7 HOH A 109 409 28 HOH HOH . 
L 7 HOH A 110 410 246 HOH HOH . 
L 7 HOH A 111 411 12 HOH HOH . 
L 7 HOH A 112 412 169 HOH HOH . 
L 7 HOH A 113 413 152 HOH HOH . 
L 7 HOH A 114 414 50 HOH HOH . 
L 7 HOH A 115 415 30 HOH HOH . 
L 7 HOH A 116 416 24 HOH HOH . 
L 7 HOH A 117 417 195 HOH HOH . 
L 7 HOH A 118 418 143 HOH HOH . 
L 7 HOH A 119 419 190 HOH HOH . 
L 7 HOH A 120 420 65 HOH HOH . 
L 7 HOH A 121 421 98 HOH HOH . 
L 7 HOH A 122 422 191 HOH HOH . 
L 7 HOH A 123 423 264 HOH HOH . 
L 7 HOH A 124 424 63 HOH HOH . 
L 7 HOH A 125 425 33 HOH HOH . 
L 7 HOH A 126 426 162 HOH HOH . 
L 7 HOH A 127 427 284 HOH HOH . 
L 7 HOH A 128 428 116 HOH HOH . 
L 7 HOH A 129 429 227 HOH HOH . 
L 7 HOH A 130 430 163 HOH HOH . 
L 7 HOH A 131 431 224 HOH HOH . 
L 7 HOH A 132 432 137 HOH HOH . 
L 7 HOH A 133 433 209 HOH HOH . 
L 7 HOH A 134 434 245 HOH HOH . 
L 7 HOH A 135 435 19 HOH HOH . 
L 7 HOH A 136 436 146 HOH HOH . 
L 7 HOH A 137 437 47 HOH HOH . 
L 7 HOH A 138 438 136 HOH HOH . 
L 7 HOH A 139 439 155 HOH HOH . 
L 7 HOH A 140 440 226 HOH HOH . 
L 7 HOH A 141 441 273 HOH HOH . 
L 7 HOH A 142 442 248 HOH HOH . 
L 7 HOH A 143 443 68 HOH HOH . 
L 7 HOH A 144 444 121 HOH HOH . 
L 7 HOH A 145 445 122 HOH HOH . 
L 7 HOH A 146 446 41 HOH HOH . 
L 7 HOH A 147 447 282 HOH HOH . 
L 7 HOH A 148 448 120 HOH HOH . 
L 7 HOH A 149 449 200 HOH HOH . 
L 7 HOH A 150 450 263 HOH HOH . 
L 7 HOH A 151 451 197 HOH HOH . 
L 7 HOH A 152 452 64 HOH HOH . 
L 7 HOH A 153 453 262 HOH HOH . 
L 7 HOH A 154 454 281 HOH HOH . 
L 7 HOH A 155 455 22 HOH HOH . 
L 7 HOH A 156 456 130 HOH HOH . 
L 7 HOH A 157 457 58 HOH HOH . 
L 7 HOH A 158 458 194 HOH HOH . 
L 7 HOH A 159 459 102 HOH HOH . 
L 7 HOH A 160 460 153 HOH HOH . 
L 7 HOH A 161 461 139 HOH HOH . 
L 7 HOH A 162 462 176 HOH HOH . 
L 7 HOH A 163 463 247 HOH HOH . 
L 7 HOH A 164 464 36 HOH HOH . 
L 7 HOH A 165 465 266 HOH HOH . 
L 7 HOH A 166 466 222 HOH HOH . 
L 7 HOH A 167 467 279 HOH HOH . 
L 7 HOH A 168 468 151 HOH HOH . 
L 7 HOH A 169 469 212 HOH HOH . 
L 7 HOH A 170 470 97 HOH HOH . 
L 7 HOH A 171 471 211 HOH HOH . 
L 7 HOH A 172 472 127 HOH HOH . 
L 7 HOH A 173 473 280 HOH HOH . 
L 7 HOH A 174 474 283 HOH HOH . 
L 7 HOH A 175 475 101 HOH HOH . 
L 7 HOH A 176 476 57 HOH HOH . 
L 7 HOH A 177 477 21 HOH HOH . 
L 7 HOH A 178 478 61 HOH HOH . 
L 7 HOH A 179 479 142 HOH HOH . 
L 7 HOH A 180 480 165 HOH HOH . 
L 7 HOH A 181 481 104 HOH HOH . 
L 7 HOH A 182 482 275 HOH HOH . 
L 7 HOH A 183 483 138 HOH HOH . 
L 7 HOH A 184 484 148 HOH HOH . 
M 7 HOH B 1 201 119 HOH HOH . 
M 7 HOH B 2 202 255 HOH HOH . 
M 7 HOH B 3 203 66 HOH HOH . 
M 7 HOH B 4 204 105 HOH HOH . 
M 7 HOH B 5 205 71 HOH HOH . 
M 7 HOH B 6 206 78 HOH HOH . 
M 7 HOH B 7 207 52 HOH HOH . 
M 7 HOH B 8 208 256 HOH HOH . 
M 7 HOH B 9 209 131 HOH HOH . 
M 7 HOH B 10 210 258 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . B . D 4 26.288 -34.821 8.369 0.43 40 ? C1 EDO 202 A 1 
HETATM 2 O O1 EDO . B . D 4 25.66 -35.467 7.262 0.43 41.66 ? O1 EDO 202 A 1 
HETATM 3 C C2 EDO . B . D 4 26.317 -33.328 8.098 0.43 39.26 ? C2 EDO 202 A 1 
HETATM 4 O O2 EDO . B . D 4 26.915 -32.682 9.219 0.43 38.81 ? O2 EDO 202 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           4 
#