data_7OL6 # _model_server_result.job_id LVkB0m4qGcVH9NrnTWBx5w _model_server_result.datetime_utc '2025-01-10 09:13:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ol6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 7OL6 # _exptl.entry_id 7OL6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OL6 _cell.length_a 30.418 _cell.length_b 55.238 _cell.length_c 66.174 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OL6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 G NA NA . A NA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc5 G NA NA . A NA 206 1_555 H O HOH . A HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc6 G NA NA . A NA 206 1_555 H O HOH . A HOH 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 7OL6 _atom_sites.fract_transf_matrix[1][1] 0.032875 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018103 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015112 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 201 202 CL CL . C 3 IMD A 1 202 301 IMD IMD . D 3 IMD A 1 203 401 IMD IMD . E 3 IMD A 1 204 501 IMD IMD . F 3 IMD A 1 205 601 IMD IMD . G 4 NA A 1 206 106 NA NA . H 5 HOH A 1 301 98 HOH HOH . H 5 HOH A 2 302 17 HOH HOH . H 5 HOH A 3 303 55 HOH HOH . H 5 HOH A 4 304 18 HOH HOH . H 5 HOH A 5 305 64 HOH HOH . H 5 HOH A 6 306 118 HOH HOH . H 5 HOH A 7 307 62 HOH HOH . H 5 HOH A 8 308 128 HOH HOH . H 5 HOH A 9 309 6 HOH HOH . H 5 HOH A 10 310 70 HOH HOH . H 5 HOH A 11 311 32 HOH HOH . H 5 HOH A 12 312 107 HOH HOH . H 5 HOH A 13 313 4 HOH HOH . H 5 HOH A 14 314 111 HOH HOH . H 5 HOH A 15 315 97 HOH HOH . H 5 HOH A 16 316 22 HOH HOH . H 5 HOH A 17 317 102 HOH HOH . H 5 HOH A 18 318 54 HOH HOH . H 5 HOH A 19 319 78 HOH HOH . H 5 HOH A 20 320 36 HOH HOH . H 5 HOH A 21 321 57 HOH HOH . H 5 HOH A 22 322 63 HOH HOH . H 5 HOH A 23 323 42 HOH HOH . H 5 HOH A 24 324 15 HOH HOH . H 5 HOH A 25 325 24 HOH HOH . H 5 HOH A 26 326 53 HOH HOH . H 5 HOH A 27 327 75 HOH HOH . H 5 HOH A 28 328 23 HOH HOH . H 5 HOH A 29 329 41 HOH HOH . H 5 HOH A 30 330 108 HOH HOH . H 5 HOH A 31 331 34 HOH HOH . H 5 HOH A 32 332 28 HOH HOH . H 5 HOH A 33 333 91 HOH HOH . H 5 HOH A 34 334 95 HOH HOH . H 5 HOH A 35 335 109 HOH HOH . H 5 HOH A 36 336 40 HOH HOH . H 5 HOH A 37 337 50 HOH HOH . H 5 HOH A 38 338 2 HOH HOH . H 5 HOH A 39 339 38 HOH HOH . H 5 HOH A 40 340 20 HOH HOH . H 5 HOH A 41 341 56 HOH HOH . H 5 HOH A 42 342 9 HOH HOH . H 5 HOH A 43 343 46 HOH HOH . H 5 HOH A 44 344 83 HOH HOH . H 5 HOH A 45 345 110 HOH HOH . H 5 HOH A 46 346 77 HOH HOH . H 5 HOH A 47 347 58 HOH HOH . H 5 HOH A 48 348 112 HOH HOH . H 5 HOH A 49 349 115 HOH HOH . H 5 HOH A 50 350 11 HOH HOH . H 5 HOH A 51 351 44 HOH HOH . H 5 HOH A 52 352 25 HOH HOH . H 5 HOH A 53 353 12 HOH HOH . H 5 HOH A 54 354 103 HOH HOH . H 5 HOH A 55 355 29 HOH HOH . H 5 HOH A 56 356 69 HOH HOH . H 5 HOH A 57 357 79 HOH HOH . H 5 HOH A 58 358 10 HOH HOH . H 5 HOH A 59 359 85 HOH HOH . H 5 HOH A 60 360 80 HOH HOH . H 5 HOH A 61 361 52 HOH HOH . H 5 HOH A 62 362 27 HOH HOH . H 5 HOH A 63 363 39 HOH HOH . H 5 HOH A 64 364 21 HOH HOH . H 5 HOH A 65 365 94 HOH HOH . H 5 HOH A 66 366 8 HOH HOH . H 5 HOH A 67 367 74 HOH HOH . H 5 HOH A 68 368 121 HOH HOH . H 5 HOH A 69 369 99 HOH HOH . H 5 HOH A 70 370 86 HOH HOH . H 5 HOH A 71 371 33 HOH HOH . H 5 HOH A 72 372 1 HOH HOH . H 5 HOH A 73 373 89 HOH HOH . H 5 HOH A 74 374 88 HOH HOH . H 5 HOH A 75 375 72 HOH HOH . H 5 HOH A 76 376 30 HOH HOH . H 5 HOH A 77 377 13 HOH HOH . H 5 HOH A 78 378 131 HOH HOH . H 5 HOH A 79 379 93 HOH HOH . H 5 HOH A 80 380 3 HOH HOH . H 5 HOH A 81 381 66 HOH HOH . H 5 HOH A 82 382 19 HOH HOH . H 5 HOH A 83 383 48 HOH HOH . H 5 HOH A 84 384 119 HOH HOH . H 5 HOH A 85 385 117 HOH HOH . H 5 HOH A 86 386 14 HOH HOH . H 5 HOH A 87 387 16 HOH HOH . H 5 HOH A 88 388 101 HOH HOH . H 5 HOH A 89 389 31 HOH HOH . H 5 HOH A 90 390 71 HOH HOH . H 5 HOH A 91 391 37 HOH HOH . H 5 HOH A 92 392 87 HOH HOH . H 5 HOH A 93 393 68 HOH HOH . H 5 HOH A 94 394 67 HOH HOH . H 5 HOH A 95 395 92 HOH HOH . H 5 HOH A 96 396 84 HOH HOH . H 5 HOH A 97 397 106 HOH HOH . H 5 HOH A 98 398 47 HOH HOH . H 5 HOH A 99 399 49 HOH HOH . H 5 HOH A 100 400 45 HOH HOH . H 5 HOH A 101 401 127 HOH HOH . H 5 HOH A 102 402 35 HOH HOH . H 5 HOH A 103 403 61 HOH HOH . H 5 HOH A 104 404 51 HOH HOH . H 5 HOH A 105 405 90 HOH HOH . H 5 HOH A 106 406 7 HOH HOH . H 5 HOH A 107 407 82 HOH HOH . H 5 HOH A 108 408 5 HOH HOH . H 5 HOH A 109 409 123 HOH HOH . H 5 HOH A 110 410 81 HOH HOH . H 5 HOH A 111 411 96 HOH HOH . H 5 HOH A 112 412 60 HOH HOH . H 5 HOH A 113 413 125 HOH HOH . H 5 HOH A 114 414 130 HOH HOH . H 5 HOH A 115 415 105 HOH HOH . H 5 HOH A 116 416 129 HOH HOH . H 5 HOH A 117 417 43 HOH HOH . H 5 HOH A 118 418 59 HOH HOH . H 5 HOH A 119 419 76 HOH HOH . H 5 HOH A 120 420 104 HOH HOH . H 5 HOH A 121 421 100 HOH HOH . H 5 HOH A 122 422 26 HOH HOH . H 5 HOH A 123 423 65 HOH HOH . H 5 HOH A 124 424 122 HOH HOH . H 5 HOH A 125 425 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . F 3 -12.702 -14.732 -3.044 1 26.59 ? N1 IMD 205 A 1 HETATM 2 C C2 IMD . . . F 3 -11.892 -14.691 -1.962 1 26.71 ? C2 IMD 205 A 1 HETATM 3 N N3 IMD . . . F 3 -12.364 -13.75 -1.113 1 28.79 ? N3 IMD 205 A 1 HETATM 4 C C4 IMD . . . F 3 -13.469 -13.197 -1.657 1 26.96 ? C4 IMD 205 A 1 HETATM 5 C C5 IMD . . . F 3 -13.683 -13.821 -2.878 1 26.54 ? C5 IMD 205 A 1 HETATM 6 H HN1 IMD . . . F 3 -12.594 -15.323 -3.818 1 31.91 ? HN1 IMD 205 A 1 HETATM 7 H H2 IMD . . . F 3 -11.099 -15.248 -1.817 1 32.06 ? H2 IMD 205 A 1 HETATM 8 H HN3 IMD . . . F 3 -11.971 -13.51 -0.248 1 34.55 ? HN3 IMD 205 A 1 HETATM 9 H H4 IMD . . . F 3 -14.018 -12.487 -1.263 1 32.35 ? H4 IMD 205 A 1 HETATM 10 H H5 IMD . . . F 3 -14.413 -13.634 -3.504 1 31.85 ? H5 IMD 205 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 475 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #