data_7OLK # _model_server_result.job_id eUjwbsgxEFffxcshsMvkZA _model_server_result.datetime_utc '2024-12-03 04:50:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7olk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7OLK # _exptl.entry_id 7OLK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OLK _cell.length_a 73.09 _cell.length_b 119.95 _cell.length_c 66.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -73.09 0 -33.29 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 134 A HIS 134 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc2 A OD1 ASP 136 A ASP 136 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 A NE2 HIS 211 A HIS 211 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc4 B NI NI . A NI 401 1_555 D O1 TRS . A TRS 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 B NI NI . A NI 401 1_555 D O3 TRS . A TRS 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc6 B NI NI . A NI 401 1_555 D N TRS . A TRS 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 371 n n C C2 TRS sing 372 n n C C3 TRS sing 373 n n C N TRS sing 374 n n C1 O1 TRS sing 375 n n C1 H11 TRS sing 376 n n C1 H12 TRS sing 377 n n C2 O2 TRS sing 378 n n C2 H21 TRS sing 379 n n C2 H22 TRS sing 380 n n C3 O3 TRS sing 381 n n C3 H31 TRS sing 382 n n C3 H32 TRS sing 383 n n N HN1 TRS sing 384 n n N HN2 TRS sing 385 n n N HN3 TRS sing 386 n n O1 HO1 TRS sing 387 n n O2 HO2 TRS sing 388 n n O3 HO3 TRS sing 389 n n # _atom_sites.entry_id 7OLK _atom_sites.fract_transf_matrix[1][1] 0.013682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008337 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 401 301 NI NI . C 3 CO0 A 1 402 303 CO0 LIG . D 4 TRS A 1 403 305 TRS TRS . E 5 BR A 1 404 1 BR BR . F 6 CL A 1 405 2 CL CL . G 7 HOH A 1 501 145 HOH HOH . G 7 HOH A 2 502 9 HOH HOH . G 7 HOH A 3 503 101 HOH HOH . G 7 HOH A 4 504 88 HOH HOH . G 7 HOH A 5 505 56 HOH HOH . G 7 HOH A 6 506 58 HOH HOH . G 7 HOH A 7 507 32 HOH HOH . G 7 HOH A 8 508 41 HOH HOH . G 7 HOH A 9 509 48 HOH HOH . G 7 HOH A 10 510 57 HOH HOH . G 7 HOH A 11 511 119 HOH HOH . G 7 HOH A 12 512 70 HOH HOH . G 7 HOH A 13 513 76 HOH HOH . G 7 HOH A 14 514 104 HOH HOH . G 7 HOH A 15 515 114 HOH HOH . G 7 HOH A 16 516 131 HOH HOH . G 7 HOH A 17 517 45 HOH HOH . G 7 HOH A 18 518 24 HOH HOH . G 7 HOH A 19 519 49 HOH HOH . G 7 HOH A 20 520 11 HOH HOH . G 7 HOH A 21 521 135 HOH HOH . G 7 HOH A 22 522 110 HOH HOH . G 7 HOH A 23 523 103 HOH HOH . G 7 HOH A 24 524 75 HOH HOH . G 7 HOH A 25 525 125 HOH HOH . G 7 HOH A 26 526 86 HOH HOH . G 7 HOH A 27 527 100 HOH HOH . G 7 HOH A 28 528 47 HOH HOH . G 7 HOH A 29 529 40 HOH HOH . G 7 HOH A 30 530 102 HOH HOH . G 7 HOH A 31 531 134 HOH HOH . G 7 HOH A 32 532 28 HOH HOH . G 7 HOH A 33 533 146 HOH HOH . G 7 HOH A 34 534 155 HOH HOH . G 7 HOH A 35 535 22 HOH HOH . G 7 HOH A 36 536 99 HOH HOH . G 7 HOH A 37 537 127 HOH HOH . G 7 HOH A 38 538 71 HOH HOH . G 7 HOH A 39 539 126 HOH HOH . G 7 HOH A 40 540 91 HOH HOH . G 7 HOH A 41 541 38 HOH HOH . G 7 HOH A 42 542 54 HOH HOH . G 7 HOH A 43 543 39 HOH HOH . G 7 HOH A 44 544 121 HOH HOH . G 7 HOH A 45 545 124 HOH HOH . G 7 HOH A 46 546 29 HOH HOH . G 7 HOH A 47 547 153 HOH HOH . G 7 HOH A 48 548 59 HOH HOH . G 7 HOH A 49 549 112 HOH HOH . G 7 HOH A 50 550 31 HOH HOH . G 7 HOH A 51 551 138 HOH HOH . G 7 HOH A 52 552 46 HOH HOH . G 7 HOH A 53 553 37 HOH HOH . G 7 HOH A 54 554 98 HOH HOH . G 7 HOH A 55 555 5 HOH HOH . G 7 HOH A 56 556 14 HOH HOH . G 7 HOH A 57 557 68 HOH HOH . G 7 HOH A 58 558 21 HOH HOH . G 7 HOH A 59 559 6 HOH HOH . G 7 HOH A 60 560 83 HOH HOH . G 7 HOH A 61 561 50 HOH HOH . G 7 HOH A 62 562 44 HOH HOH . G 7 HOH A 63 563 4 HOH HOH . G 7 HOH A 64 564 105 HOH HOH . G 7 HOH A 65 565 116 HOH HOH . G 7 HOH A 66 566 12 HOH HOH . G 7 HOH A 67 567 19 HOH HOH . G 7 HOH A 68 568 51 HOH HOH . G 7 HOH A 69 569 3 HOH HOH . G 7 HOH A 70 570 15 HOH HOH . G 7 HOH A 71 571 65 HOH HOH . G 7 HOH A 72 572 36 HOH HOH . G 7 HOH A 73 573 25 HOH HOH . G 7 HOH A 74 574 89 HOH HOH . G 7 HOH A 75 575 60 HOH HOH . G 7 HOH A 76 576 69 HOH HOH . G 7 HOH A 77 577 148 HOH HOH . G 7 HOH A 78 578 64 HOH HOH . G 7 HOH A 79 579 34 HOH HOH . G 7 HOH A 80 580 35 HOH HOH . G 7 HOH A 81 581 13 HOH HOH . G 7 HOH A 82 582 10 HOH HOH . G 7 HOH A 83 583 33 HOH HOH . G 7 HOH A 84 584 108 HOH HOH . G 7 HOH A 85 585 159 HOH HOH . G 7 HOH A 86 586 154 HOH HOH . G 7 HOH A 87 587 140 HOH HOH . G 7 HOH A 88 588 17 HOH HOH . G 7 HOH A 89 589 73 HOH HOH . G 7 HOH A 90 590 96 HOH HOH . G 7 HOH A 91 591 109 HOH HOH . G 7 HOH A 92 592 94 HOH HOH . G 7 HOH A 93 593 62 HOH HOH . G 7 HOH A 94 594 30 HOH HOH . G 7 HOH A 95 595 123 HOH HOH . G 7 HOH A 96 596 53 HOH HOH . G 7 HOH A 97 597 143 HOH HOH . G 7 HOH A 98 598 52 HOH HOH . G 7 HOH A 99 599 61 HOH HOH . G 7 HOH A 100 600 113 HOH HOH . G 7 HOH A 101 601 63 HOH HOH . G 7 HOH A 102 602 67 HOH HOH . G 7 HOH A 103 603 97 HOH HOH . G 7 HOH A 104 604 149 HOH HOH . G 7 HOH A 105 605 84 HOH HOH . G 7 HOH A 106 606 8 HOH HOH . G 7 HOH A 107 607 117 HOH HOH . G 7 HOH A 108 608 85 HOH HOH . G 7 HOH A 109 609 95 HOH HOH . G 7 HOH A 110 610 133 HOH HOH . G 7 HOH A 111 611 144 HOH HOH . G 7 HOH A 112 612 130 HOH HOH . G 7 HOH A 113 613 106 HOH HOH . G 7 HOH A 114 614 18 HOH HOH . G 7 HOH A 115 615 156 HOH HOH . G 7 HOH A 116 616 118 HOH HOH . G 7 HOH A 117 617 43 HOH HOH . G 7 HOH A 118 618 72 HOH HOH . G 7 HOH A 119 619 66 HOH HOH . G 7 HOH A 120 620 42 HOH HOH . G 7 HOH A 121 621 20 HOH HOH . G 7 HOH A 122 622 16 HOH HOH . G 7 HOH A 123 623 26 HOH HOH . G 7 HOH A 124 624 128 HOH HOH . G 7 HOH A 125 625 27 HOH HOH . G 7 HOH A 126 626 55 HOH HOH . G 7 HOH A 127 627 93 HOH HOH . G 7 HOH A 128 628 80 HOH HOH . G 7 HOH A 129 629 132 HOH HOH . G 7 HOH A 130 630 136 HOH HOH . G 7 HOH A 131 631 92 HOH HOH . G 7 HOH A 132 632 23 HOH HOH . G 7 HOH A 133 633 87 HOH HOH . G 7 HOH A 134 634 82 HOH HOH . G 7 HOH A 135 635 74 HOH HOH . G 7 HOH A 136 636 147 HOH HOH . G 7 HOH A 137 637 152 HOH HOH . G 7 HOH A 138 638 81 HOH HOH . G 7 HOH A 139 639 142 HOH HOH . G 7 HOH A 140 640 129 HOH HOH . G 7 HOH A 141 641 122 HOH HOH . G 7 HOH A 142 642 158 HOH HOH . G 7 HOH A 143 643 139 HOH HOH . G 7 HOH A 144 644 78 HOH HOH . G 7 HOH A 145 645 115 HOH HOH . G 7 HOH A 146 646 90 HOH HOH . G 7 HOH A 147 647 120 HOH HOH . G 7 HOH A 148 648 150 HOH HOH . G 7 HOH A 149 649 77 HOH HOH . G 7 HOH A 150 650 151 HOH HOH . G 7 HOH A 151 651 107 HOH HOH . G 7 HOH A 152 652 141 HOH HOH . G 7 HOH A 153 653 79 HOH HOH . G 7 HOH A 154 654 7 HOH HOH . G 7 HOH A 155 655 157 HOH HOH . G 7 HOH A 156 656 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . D 4 -20.173 -22.092 -5.041 1 34.07 ? C TRS 403 A 1 HETATM 2 C C1 TRS . . . D 4 -20.403 -22.044 -6.548 1 32.05 ? C1 TRS 403 A 1 HETATM 3 C C2 TRS . . . D 4 -19.964 -20.695 -4.476 1 36.67 ? C2 TRS 403 A 1 HETATM 4 C C3 TRS . . . D 4 -18.964 -22.966 -4.718 1 34.21 ? C3 TRS 403 A 1 HETATM 5 N N TRS . . . D 4 -21.398 -22.674 -4.386 1 34.57 ? N TRS 403 A 1 HETATM 6 O O1 TRS . . . D 4 -20.487 -23.347 -7.1 1 28.37 ? O1 TRS 403 A 1 HETATM 7 O O2 TRS . . . D 4 -19.855 -20.726 -3.062 1 38.53 ? O2 TRS 403 A 1 HETATM 8 O O3 TRS . . . D 4 -19.345 -24.3 -4.429 1 35.73 ? O3 TRS 403 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #