data_7OLO
#
_model_server_result.job_id            oaf7FpEKPlW8Ghew3_Zp8A 
_model_server_result.datetime_utc      '2024-12-03 04:26:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7olo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":406}' 
#
_entry.id    7OLO 
#
_exptl.entry_id    7OLO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OLO 
_cell.length_a            73.98 
_cell.length_b            121.24 
_cell.length_c            67.32 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OLO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_454 -x-1,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 -73.98 0 -33.66 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 134 A HIS 134 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc2 A OD1 ASP 136 A ASP 136 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc3 A NE2 HIS 211 A HIS 211 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc4 B NI NI . A NI 401 1_555 G O3 GOL . A GOL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc5 B NI NI . A NI 401 1_555 G O1 GOL . A GOL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc6 B NI NI . A NI 401 1_555 G O2 GOL . A GOL 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 166 n n 
C1 C2 GOL sing 167 n n 
C1 H11 GOL sing 168 n n 
C1 H12 GOL sing 169 n n 
O1 HO1 GOL sing 170 n n 
C2 O2 GOL sing 171 n n 
C2 C3 GOL sing 172 n n 
C2 H2 GOL sing 173 n n 
O2 HO2 GOL sing 174 n n 
C3 O3 GOL sing 175 n n 
C3 H31 GOL sing 176 n n 
C3 H32 GOL sing 177 n n 
O3 HO3 GOL sing 178 n n 
#
_atom_sites.entry_id                     7OLO 
_atom_sites.fract_transf_matrix[1][1]    0.013517 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008248 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 401 301 NI NI . 
C 3 CO0 A 1 402 303 CO0 LIG . 
D 4 BR A 1 403 1 BR BR . 
E 5 CL A 1 404 2 CL CL . 
F 6 GOL A 1 405 3 GOL GOL . 
G 6 GOL A 1 406 4 GOL GOL . 
H 7 HOH A 1 501 54 HOH HOH . 
H 7 HOH A 2 502 76 HOH HOH . 
H 7 HOH A 3 503 5 HOH HOH . 
H 7 HOH A 4 504 58 HOH HOH . 
H 7 HOH A 5 505 21 HOH HOH . 
H 7 HOH A 6 506 10 HOH HOH . 
H 7 HOH A 7 507 52 HOH HOH . 
H 7 HOH A 8 508 69 HOH HOH . 
H 7 HOH A 9 509 28 HOH HOH . 
H 7 HOH A 10 510 41 HOH HOH . 
H 7 HOH A 11 511 63 HOH HOH . 
H 7 HOH A 12 512 12 HOH HOH . 
H 7 HOH A 13 513 11 HOH HOH . 
H 7 HOH A 14 514 67 HOH HOH . 
H 7 HOH A 15 515 31 HOH HOH . 
H 7 HOH A 16 516 70 HOH HOH . 
H 7 HOH A 17 517 56 HOH HOH . 
H 7 HOH A 18 518 80 HOH HOH . 
H 7 HOH A 19 519 33 HOH HOH . 
H 7 HOH A 20 520 29 HOH HOH . 
H 7 HOH A 21 521 7 HOH HOH . 
H 7 HOH A 22 522 19 HOH HOH . 
H 7 HOH A 23 523 37 HOH HOH . 
H 7 HOH A 24 524 78 HOH HOH . 
H 7 HOH A 25 525 66 HOH HOH . 
H 7 HOH A 26 526 25 HOH HOH . 
H 7 HOH A 27 527 57 HOH HOH . 
H 7 HOH A 28 528 49 HOH HOH . 
H 7 HOH A 29 529 73 HOH HOH . 
H 7 HOH A 30 530 15 HOH HOH . 
H 7 HOH A 31 531 35 HOH HOH . 
H 7 HOH A 32 532 51 HOH HOH . 
H 7 HOH A 33 533 50 HOH HOH . 
H 7 HOH A 34 534 43 HOH HOH . 
H 7 HOH A 35 535 38 HOH HOH . 
H 7 HOH A 36 536 68 HOH HOH . 
H 7 HOH A 37 537 48 HOH HOH . 
H 7 HOH A 38 538 30 HOH HOH . 
H 7 HOH A 39 539 24 HOH HOH . 
H 7 HOH A 40 540 64 HOH HOH . 
H 7 HOH A 41 541 60 HOH HOH . 
H 7 HOH A 42 542 46 HOH HOH . 
H 7 HOH A 43 543 14 HOH HOH . 
H 7 HOH A 44 544 23 HOH HOH . 
H 7 HOH A 45 545 13 HOH HOH . 
H 7 HOH A 46 546 17 HOH HOH . 
H 7 HOH A 47 547 40 HOH HOH . 
H 7 HOH A 48 548 26 HOH HOH . 
H 7 HOH A 49 549 6 HOH HOH . 
H 7 HOH A 50 550 9 HOH HOH . 
H 7 HOH A 51 551 39 HOH HOH . 
H 7 HOH A 52 552 47 HOH HOH . 
H 7 HOH A 53 553 34 HOH HOH . 
H 7 HOH A 54 554 62 HOH HOH . 
H 7 HOH A 55 555 77 HOH HOH . 
H 7 HOH A 56 556 44 HOH HOH . 
H 7 HOH A 57 557 53 HOH HOH . 
H 7 HOH A 58 558 8 HOH HOH . 
H 7 HOH A 59 559 32 HOH HOH . 
H 7 HOH A 60 560 59 HOH HOH . 
H 7 HOH A 61 561 22 HOH HOH . 
H 7 HOH A 62 562 55 HOH HOH . 
H 7 HOH A 63 563 45 HOH HOH . 
H 7 HOH A 64 564 61 HOH HOH . 
H 7 HOH A 65 565 18 HOH HOH . 
H 7 HOH A 66 566 27 HOH HOH . 
H 7 HOH A 67 567 72 HOH HOH . 
H 7 HOH A 68 568 75 HOH HOH . 
H 7 HOH A 69 569 71 HOH HOH . 
H 7 HOH A 70 570 79 HOH HOH . 
H 7 HOH A 71 571 16 HOH HOH . 
H 7 HOH A 72 572 20 HOH HOH . 
H 7 HOH A 73 573 36 HOH HOH . 
H 7 HOH A 74 574 42 HOH HOH . 
H 7 HOH A 75 575 74 HOH HOH . 
H 7 HOH A 76 576 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 6 -19.697 -22.698 -4.549 1 53.06 ? C1 GOL 406 A 1 
HETATM 2 O O1 GOL . . . G 6 -19.355 -24.034 -4.911 1 49.65 ? O1 GOL 406 A 1 
HETATM 3 C C2 GOL . . . G 6 -20.909 -22.21 -5.314 1 52.6 ? C2 GOL 406 A 1 
HETATM 4 O O2 GOL . . . G 6 -22.025 -23.055 -5.034 1 51.46 ? O2 GOL 406 A 1 
HETATM 5 C C3 GOL . . . G 6 -20.681 -22.15 -6.81 1 53.29 ? C3 GOL 406 A 1 
HETATM 6 O O3 GOL . . . G 6 -20.615 -23.453 -7.384 1 51.03 ? O3 GOL 406 A 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#