data_7OLW # _model_server_result.job_id CCKD84vrruoUi7i-lX6tqw _model_server_result.datetime_utc '2024-10-20 13:02:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7olw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7OLW # _exptl.entry_id 7OLW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 348.351 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(3-aminophenyl)furan-2-carboxamido-(beta-L-fucopyranose) _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7OLW _cell.length_a 42.931 _cell.length_b 42.931 _cell.length_c 94.882 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OLW _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -y+1,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 21.4655 37.179337 0 3 'crystal symmetry operation' 3_565 -x+y,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -21.4655 37.179337 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H20 N2 O6' _chem_comp.formula_weight 348.351 _chem_comp.id VJW _chem_comp.mon_nstd_flag . _chem_comp.name 5-(3-aminophenyl)furan-2-carboxamido-(beta-L-fucopyranose) _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 5-(3-aminophenyl)-~{N}-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]furan-2-carboxamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N2 C14 VJW sing 376 n n C15 C14 VJW doub 377 n y C15 C16 VJW sing 378 n y C14 C13 VJW sing 379 n y C16 C17 VJW doub 380 n y C13 C12 VJW doub 381 n y C17 C12 VJW sing 382 n y C12 C11 VJW sing 383 n n C11 C10 VJW doub 384 n y C11 O8 VJW sing 385 n y C10 C9 VJW sing 386 n y O8 C8 VJW sing 387 n y C9 C8 VJW doub 388 n y C8 C7 VJW sing 389 n n C7 N1 VJW sing 390 n n C7 O7 VJW doub 391 n n N1 C1 VJW sing 392 n n C1 O5 VJW sing 393 n n C1 C2 VJW sing 394 n n O5 C5 VJW sing 395 n n C2 O2 VJW sing 396 n n C2 C3 VJW sing 397 n n O4 C4 VJW sing 398 n n C6 C5 VJW sing 399 n n C5 C4 VJW sing 400 n n C3 O3 VJW sing 401 n n C3 C4 VJW sing 402 n n N1 H1 VJW sing 403 n n C4 H2 VJW sing 404 n n C5 H3 VJW sing 405 n n C6 H4 VJW sing 406 n n C6 H5 VJW sing 407 n n C6 H6 VJW sing 408 n n C10 H7 VJW sing 409 n n C13 H8 VJW sing 410 n n C15 H9 VJW sing 411 n n C17 H10 VJW sing 412 n n C1 H11 VJW sing 413 n n C3 H12 VJW sing 414 n n O3 H13 VJW sing 415 n n C2 H14 VJW sing 416 n n O2 H15 VJW sing 417 n n O4 H16 VJW sing 418 n n C9 H17 VJW sing 419 n n C16 H18 VJW sing 420 n n N2 H19 VJW sing 421 n n N2 H20 VJW sing 422 n n # _atom_sites.entry_id 7OLW _atom_sites.fract_transf_matrix[1][1] 0.023293 _atom_sites.fract_transf_matrix[1][2] 0.013448 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010539 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VJW AAA 1 201 201 VJW LIG . C 3 HOH AAA 1 301 115 HOH HOH . C 3 HOH AAA 2 302 32 HOH HOH . C 3 HOH AAA 3 303 77 HOH HOH . C 3 HOH AAA 4 304 49 HOH HOH . C 3 HOH AAA 5 305 126 HOH HOH . C 3 HOH AAA 6 306 57 HOH HOH . C 3 HOH AAA 7 307 72 HOH HOH . C 3 HOH AAA 8 308 98 HOH HOH . C 3 HOH AAA 9 309 47 HOH HOH . C 3 HOH AAA 10 310 40 HOH HOH . C 3 HOH AAA 11 311 132 HOH HOH . C 3 HOH AAA 12 312 29 HOH HOH . C 3 HOH AAA 13 313 76 HOH HOH . C 3 HOH AAA 14 314 97 HOH HOH . C 3 HOH AAA 15 315 18 HOH HOH . C 3 HOH AAA 16 316 120 HOH HOH . C 3 HOH AAA 17 317 123 HOH HOH . C 3 HOH AAA 18 318 56 HOH HOH . C 3 HOH AAA 19 319 67 HOH HOH . C 3 HOH AAA 20 320 50 HOH HOH . C 3 HOH AAA 21 321 95 HOH HOH . C 3 HOH AAA 22 322 4 HOH HOH . C 3 HOH AAA 23 323 127 HOH HOH . C 3 HOH AAA 24 324 144 HOH HOH . C 3 HOH AAA 25 325 37 HOH HOH . C 3 HOH AAA 26 326 121 HOH HOH . C 3 HOH AAA 27 327 24 HOH HOH . C 3 HOH AAA 28 328 151 HOH HOH . C 3 HOH AAA 29 329 71 HOH HOH . C 3 HOH AAA 30 330 79 HOH HOH . C 3 HOH AAA 31 331 26 HOH HOH . C 3 HOH AAA 32 332 86 HOH HOH . C 3 HOH AAA 33 333 15 HOH HOH . C 3 HOH AAA 34 334 17 HOH HOH . C 3 HOH AAA 35 335 7 HOH HOH . C 3 HOH AAA 36 336 16 HOH HOH . C 3 HOH AAA 37 337 61 HOH HOH . C 3 HOH AAA 38 338 33 HOH HOH . C 3 HOH AAA 39 339 14 HOH HOH . C 3 HOH AAA 40 340 19 HOH HOH . C 3 HOH AAA 41 341 88 HOH HOH . C 3 HOH AAA 42 342 2 HOH HOH . C 3 HOH AAA 43 343 102 HOH HOH . C 3 HOH AAA 44 344 35 HOH HOH . C 3 HOH AAA 45 345 42 HOH HOH . C 3 HOH AAA 46 346 59 HOH HOH . C 3 HOH AAA 47 347 41 HOH HOH . C 3 HOH AAA 48 348 27 HOH HOH . C 3 HOH AAA 49 349 109 HOH HOH . C 3 HOH AAA 50 350 96 HOH HOH . C 3 HOH AAA 51 351 43 HOH HOH . C 3 HOH AAA 52 352 10 HOH HOH . C 3 HOH AAA 53 353 69 HOH HOH . C 3 HOH AAA 54 354 31 HOH HOH . C 3 HOH AAA 55 355 111 HOH HOH . C 3 HOH AAA 56 356 58 HOH HOH . C 3 HOH AAA 57 357 44 HOH HOH . C 3 HOH AAA 58 358 38 HOH HOH . C 3 HOH AAA 59 359 1 HOH HOH . C 3 HOH AAA 60 360 70 HOH HOH . C 3 HOH AAA 61 361 139 HOH HOH . C 3 HOH AAA 62 362 125 HOH HOH . C 3 HOH AAA 63 363 62 HOH HOH . C 3 HOH AAA 64 364 23 HOH HOH . C 3 HOH AAA 65 365 5 HOH HOH . C 3 HOH AAA 66 366 112 HOH HOH . C 3 HOH AAA 67 367 3 HOH HOH . C 3 HOH AAA 68 368 150 HOH HOH . C 3 HOH AAA 69 369 9 HOH HOH . C 3 HOH AAA 70 370 73 HOH HOH . C 3 HOH AAA 71 371 11 HOH HOH . C 3 HOH AAA 72 372 82 HOH HOH . C 3 HOH AAA 73 373 129 HOH HOH . C 3 HOH AAA 74 374 117 HOH HOH . C 3 HOH AAA 75 375 85 HOH HOH . C 3 HOH AAA 76 376 130 HOH HOH . C 3 HOH AAA 77 377 13 HOH HOH . C 3 HOH AAA 78 378 28 HOH HOH . C 3 HOH AAA 79 379 108 HOH HOH . C 3 HOH AAA 80 380 90 HOH HOH . C 3 HOH AAA 81 381 68 HOH HOH . C 3 HOH AAA 82 382 133 HOH HOH . C 3 HOH AAA 83 383 89 HOH HOH . C 3 HOH AAA 84 384 30 HOH HOH . C 3 HOH AAA 85 385 25 HOH HOH . C 3 HOH AAA 86 386 75 HOH HOH . C 3 HOH AAA 87 387 22 HOH HOH . C 3 HOH AAA 88 388 21 HOH HOH . C 3 HOH AAA 89 389 118 HOH HOH . C 3 HOH AAA 90 390 116 HOH HOH . C 3 HOH AAA 91 391 99 HOH HOH . C 3 HOH AAA 92 392 48 HOH HOH . C 3 HOH AAA 93 393 46 HOH HOH . C 3 HOH AAA 94 394 12 HOH HOH . C 3 HOH AAA 95 395 84 HOH HOH . C 3 HOH AAA 96 396 141 HOH HOH . C 3 HOH AAA 97 397 104 HOH HOH . C 3 HOH AAA 98 398 80 HOH HOH . C 3 HOH AAA 99 399 54 HOH HOH . C 3 HOH AAA 100 400 66 HOH HOH . C 3 HOH AAA 101 401 110 HOH HOH . C 3 HOH AAA 102 402 45 HOH HOH . C 3 HOH AAA 103 403 55 HOH HOH . C 3 HOH AAA 104 404 74 HOH HOH . C 3 HOH AAA 105 405 52 HOH HOH . C 3 HOH AAA 106 406 106 HOH HOH . C 3 HOH AAA 107 407 146 HOH HOH . C 3 HOH AAA 108 408 92 HOH HOH . C 3 HOH AAA 109 409 101 HOH HOH . C 3 HOH AAA 110 410 60 HOH HOH . C 3 HOH AAA 111 411 148 HOH HOH . C 3 HOH AAA 112 412 105 HOH HOH . C 3 HOH AAA 113 413 128 HOH HOH . C 3 HOH AAA 114 414 119 HOH HOH . C 3 HOH AAA 115 415 113 HOH HOH . C 3 HOH AAA 116 416 138 HOH HOH . C 3 HOH AAA 117 417 122 HOH HOH . C 3 HOH AAA 118 418 143 HOH HOH . C 3 HOH AAA 119 419 36 HOH HOH . C 3 HOH AAA 120 420 81 HOH HOH . C 3 HOH AAA 121 421 91 HOH HOH . C 3 HOH AAA 122 422 152 HOH HOH . C 3 HOH AAA 123 423 93 HOH HOH . C 3 HOH AAA 124 424 134 HOH HOH . C 3 HOH AAA 125 425 147 HOH HOH . C 3 HOH AAA 126 426 114 HOH HOH . C 3 HOH AAA 127 427 142 HOH HOH . C 3 HOH AAA 128 428 100 HOH HOH . C 3 HOH AAA 129 429 145 HOH HOH . C 3 HOH AAA 130 430 63 HOH HOH . C 3 HOH AAA 131 431 137 HOH HOH . C 3 HOH AAA 132 432 149 HOH HOH . C 3 HOH AAA 133 433 87 HOH HOH . C 3 HOH AAA 134 434 83 HOH HOH . C 3 HOH AAA 135 435 64 HOH HOH . C 3 HOH AAA 136 436 140 HOH HOH . C 3 HOH AAA 137 437 65 HOH HOH . C 3 HOH AAA 138 438 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 VJW . . . B 2 6.024 11.488 8.545 1 12.5 0 N1 VJW 201 AAA 1 HETATM 2 C C4 VJW . . . B 2 5.739 14.616 11.278 1 11.18 0 C4 VJW 201 AAA 1 HETATM 3 C C5 VJW . . . B 2 7.036 13.847 11.1 1 12.46 0 C5 VJW 201 AAA 1 HETATM 4 C C6 VJW . . . B 2 8.254 14.736 11.064 1 12.81 0 C6 VJW 201 AAA 1 HETATM 5 C C7 VJW . . . B 2 6.98 10.598 8.288 1 12.92 0 C7 VJW 201 AAA 1 HETATM 6 C C8 VJW . . . B 2 7.086 10.141 6.917 1 13.41 0 C8 VJW 201 AAA 1 HETATM 7 C C10 VJW . . . B 2 7.514 9.157 4.962 1 15.48 0 C10 VJW 201 AAA 1 HETATM 8 C C13 VJW . . . B 2 5.327 9.341 2.742 1 13.82 0 C13 VJW 201 AAA 1 HETATM 9 C C15 VJW . . . B 2 4.026 10.874 1.486 1 13.75 0 C15 VJW 201 AAA 1 HETATM 10 C C17 VJW . . . B 2 5.08 11.588 3.5 1 14.82 0 C17 VJW 201 AAA 1 HETATM 11 C C1 VJW . . . B 2 5.931 12.156 9.793 1 12.61 0 C1 VJW 201 AAA 1 HETATM 12 O O5 VJW . . . B 2 6.972 13.139 9.85 1 12.15 0 O5 VJW 201 AAA 1 HETATM 13 C C3 VJW . . . B 2 4.563 13.66 11.222 1 12.1 0 C3 VJW 201 AAA 1 HETATM 14 O O3 VJW . . . B 2 3.313 14.352 11.277 1 12.39 0 O3 VJW 201 AAA 1 HETATM 15 C C2 VJW . . . B 2 4.588 12.851 9.932 1 11.59 0 C2 VJW 201 AAA 1 HETATM 16 O O2 VJW . . . B 2 3.537 11.899 9.99 1 11.77 0 O2 VJW 201 AAA 1 HETATM 17 O O4 VJW . . . B 2 5.617 15.604 10.251 1 12.43 0 O4 VJW 201 AAA 1 HETATM 18 O O7 VJW . . . B 2 7.783 10.24 9.151 1 15.48 0 O7 VJW 201 AAA 1 HETATM 19 O O8 VJW . . . B 2 6.179 10.612 6.004 1 13.16 0 O8 VJW 201 AAA 1 HETATM 20 C C11 VJW . . . B 2 6.459 9.983 4.816 1 13.41 0 C11 VJW 201 AAA 1 HETATM 21 C C9 VJW . . . B 2 7.908 9.253 6.315 1 14.92 0 C9 VJW 201 AAA 1 HETATM 22 C C12 VJW . . . B 2 5.621 10.318 3.674 1 13.17 0 C12 VJW 201 AAA 1 HETATM 23 C C16 VJW . . . B 2 4.293 11.861 2.399 1 14.75 0 C16 VJW 201 AAA 1 HETATM 24 C C14 VJW . . . B 2 4.529 9.605 1.644 1 14.15 0 C14 VJW 201 AAA 1 HETATM 25 N N2 VJW . . . B 2 4.19 8.581 0.748 1 15.3 0 N2 VJW 201 AAA 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 25 #