data_7OMW # _model_server_result.job_id aPnm4aGk5f3HG1u51XTeZg _model_server_result.datetime_utc '2024-11-16 04:57:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7omw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 7OMW # _exptl.entry_id 7OMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.198 _cell.angle_gamma 90 _cell.entry_id 7OMW _cell.length_a 36.032 _cell.length_b 61.745 _cell.length_c 50.197 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 7OMW _atom_sites.fract_transf_matrix[1][1] 0.027753 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002525 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016196 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020004 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD AAA 1 301 300 NAD NAD . C 3 GOL AAA 1 302 400 GOL GOL . D 3 GOL AAA 1 303 700 GOL GOL . E 3 GOL AAA 1 304 800 GOL GOL . F 4 SCN AAA 1 305 900 SCN SCN . G 5 HOH AAA 1 401 93 HOH HOH . G 5 HOH AAA 2 402 165 HOH HOH . G 5 HOH AAA 3 403 118 HOH HOH . G 5 HOH AAA 4 404 103 HOH HOH . G 5 HOH AAA 5 405 106 HOH HOH . G 5 HOH AAA 6 406 85 HOH HOH . G 5 HOH AAA 7 407 77 HOH HOH . G 5 HOH AAA 8 408 170 HOH HOH . G 5 HOH AAA 9 409 156 HOH HOH . G 5 HOH AAA 10 410 52 HOH HOH . G 5 HOH AAA 11 411 55 HOH HOH . G 5 HOH AAA 12 412 137 HOH HOH . G 5 HOH AAA 13 413 89 HOH HOH . G 5 HOH AAA 14 414 9 HOH HOH . G 5 HOH AAA 15 415 146 HOH HOH . G 5 HOH AAA 16 416 130 HOH HOH . G 5 HOH AAA 17 417 5 HOH HOH . G 5 HOH AAA 18 418 43 HOH HOH . G 5 HOH AAA 19 419 47 HOH HOH . G 5 HOH AAA 20 420 80 HOH HOH . G 5 HOH AAA 21 421 166 HOH HOH . G 5 HOH AAA 22 422 87 HOH HOH . G 5 HOH AAA 23 423 23 HOH HOH . G 5 HOH AAA 24 424 121 HOH HOH . G 5 HOH AAA 25 425 12 HOH HOH . G 5 HOH AAA 26 426 124 HOH HOH . G 5 HOH AAA 27 427 107 HOH HOH . G 5 HOH AAA 28 428 161 HOH HOH . G 5 HOH AAA 29 429 6 HOH HOH . G 5 HOH AAA 30 430 132 HOH HOH . G 5 HOH AAA 31 431 160 HOH HOH . G 5 HOH AAA 32 432 26 HOH HOH . G 5 HOH AAA 33 433 34 HOH HOH . G 5 HOH AAA 34 434 65 HOH HOH . G 5 HOH AAA 35 435 133 HOH HOH . G 5 HOH AAA 36 436 29 HOH HOH . G 5 HOH AAA 37 437 120 HOH HOH . G 5 HOH AAA 38 438 41 HOH HOH . G 5 HOH AAA 39 439 21 HOH HOH . G 5 HOH AAA 40 440 88 HOH HOH . G 5 HOH AAA 41 441 30 HOH HOH . G 5 HOH AAA 42 442 8 HOH HOH . G 5 HOH AAA 43 443 18 HOH HOH . G 5 HOH AAA 44 444 14 HOH HOH . G 5 HOH AAA 45 445 50 HOH HOH . G 5 HOH AAA 46 446 129 HOH HOH . G 5 HOH AAA 47 447 39 HOH HOH . G 5 HOH AAA 48 448 76 HOH HOH . G 5 HOH AAA 49 449 72 HOH HOH . G 5 HOH AAA 50 450 2 HOH HOH . G 5 HOH AAA 51 451 90 HOH HOH . G 5 HOH AAA 52 452 24 HOH HOH . G 5 HOH AAA 53 453 119 HOH HOH . G 5 HOH AAA 54 454 167 HOH HOH . G 5 HOH AAA 55 455 155 HOH HOH . G 5 HOH AAA 56 456 44 HOH HOH . G 5 HOH AAA 57 457 105 HOH HOH . G 5 HOH AAA 58 458 113 HOH HOH . G 5 HOH AAA 59 459 61 HOH HOH . G 5 HOH AAA 60 460 4 HOH HOH . G 5 HOH AAA 61 461 27 HOH HOH . G 5 HOH AAA 62 462 7 HOH HOH . G 5 HOH AAA 63 463 46 HOH HOH . G 5 HOH AAA 64 464 83 HOH HOH . G 5 HOH AAA 65 465 57 HOH HOH . G 5 HOH AAA 66 466 108 HOH HOH . G 5 HOH AAA 67 467 16 HOH HOH . G 5 HOH AAA 68 468 58 HOH HOH . G 5 HOH AAA 69 469 62 HOH HOH . G 5 HOH AAA 70 470 19 HOH HOH . G 5 HOH AAA 71 471 135 HOH HOH . G 5 HOH AAA 72 472 25 HOH HOH . G 5 HOH AAA 73 473 134 HOH HOH . G 5 HOH AAA 74 474 60 HOH HOH . G 5 HOH AAA 75 475 35 HOH HOH . G 5 HOH AAA 76 476 95 HOH HOH . G 5 HOH AAA 77 477 115 HOH HOH . G 5 HOH AAA 78 478 125 HOH HOH . G 5 HOH AAA 79 479 91 HOH HOH . G 5 HOH AAA 80 480 101 HOH HOH . G 5 HOH AAA 81 481 66 HOH HOH . G 5 HOH AAA 82 482 36 HOH HOH . G 5 HOH AAA 83 483 17 HOH HOH . G 5 HOH AAA 84 484 79 HOH HOH . G 5 HOH AAA 85 485 84 HOH HOH . G 5 HOH AAA 86 486 149 HOH HOH . G 5 HOH AAA 87 487 32 HOH HOH . G 5 HOH AAA 88 488 3 HOH HOH . G 5 HOH AAA 89 489 1 HOH HOH . G 5 HOH AAA 90 490 56 HOH HOH . G 5 HOH AAA 91 491 40 HOH HOH . G 5 HOH AAA 92 492 112 HOH HOH . G 5 HOH AAA 93 493 20 HOH HOH . G 5 HOH AAA 94 494 78 HOH HOH . G 5 HOH AAA 95 495 48 HOH HOH . G 5 HOH AAA 96 496 104 HOH HOH . G 5 HOH AAA 97 497 102 HOH HOH . G 5 HOH AAA 98 498 131 HOH HOH . G 5 HOH AAA 99 499 28 HOH HOH . G 5 HOH AAA 100 500 13 HOH HOH . G 5 HOH AAA 101 501 11 HOH HOH . G 5 HOH AAA 102 502 38 HOH HOH . G 5 HOH AAA 103 503 68 HOH HOH . G 5 HOH AAA 104 504 45 HOH HOH . G 5 HOH AAA 105 505 67 HOH HOH . G 5 HOH AAA 106 506 150 HOH HOH . G 5 HOH AAA 107 507 15 HOH HOH . G 5 HOH AAA 108 508 153 HOH HOH . G 5 HOH AAA 109 509 22 HOH HOH . G 5 HOH AAA 110 510 169 HOH HOH . G 5 HOH AAA 111 511 164 HOH HOH . G 5 HOH AAA 112 512 51 HOH HOH . G 5 HOH AAA 113 513 123 HOH HOH . G 5 HOH AAA 114 514 126 HOH HOH . G 5 HOH AAA 115 515 10 HOH HOH . G 5 HOH AAA 116 516 31 HOH HOH . G 5 HOH AAA 117 517 74 HOH HOH . G 5 HOH AAA 118 518 64 HOH HOH . G 5 HOH AAA 119 519 49 HOH HOH . G 5 HOH AAA 120 520 154 HOH HOH . G 5 HOH AAA 121 521 71 HOH HOH . G 5 HOH AAA 122 522 175 HOH HOH . G 5 HOH AAA 123 523 157 HOH HOH . G 5 HOH AAA 124 524 142 HOH HOH . G 5 HOH AAA 125 525 33 HOH HOH . G 5 HOH AAA 126 526 53 HOH HOH . G 5 HOH AAA 127 527 42 HOH HOH . G 5 HOH AAA 128 528 117 HOH HOH . G 5 HOH AAA 129 529 96 HOH HOH . G 5 HOH AAA 130 530 174 HOH HOH . G 5 HOH AAA 131 531 151 HOH HOH . G 5 HOH AAA 132 532 122 HOH HOH . G 5 HOH AAA 133 533 128 HOH HOH . G 5 HOH AAA 134 534 114 HOH HOH . G 5 HOH AAA 135 535 70 HOH HOH . G 5 HOH AAA 136 536 97 HOH HOH . G 5 HOH AAA 137 537 81 HOH HOH . G 5 HOH AAA 138 538 63 HOH HOH . G 5 HOH AAA 139 539 92 HOH HOH . G 5 HOH AAA 140 540 75 HOH HOH . G 5 HOH AAA 141 541 86 HOH HOH . G 5 HOH AAA 142 542 59 HOH HOH . G 5 HOH AAA 143 543 162 HOH HOH . G 5 HOH AAA 144 544 99 HOH HOH . G 5 HOH AAA 145 545 158 HOH HOH . G 5 HOH AAA 146 546 148 HOH HOH . G 5 HOH AAA 147 547 171 HOH HOH . G 5 HOH AAA 148 548 143 HOH HOH . G 5 HOH AAA 149 549 163 HOH HOH . G 5 HOH AAA 150 550 82 HOH HOH . G 5 HOH AAA 151 551 110 HOH HOH . G 5 HOH AAA 152 552 152 HOH HOH . G 5 HOH AAA 153 553 136 HOH HOH . G 5 HOH AAA 154 554 168 HOH HOH . G 5 HOH AAA 155 555 141 HOH HOH . G 5 HOH AAA 156 556 94 HOH HOH . G 5 HOH AAA 157 557 147 HOH HOH . G 5 HOH AAA 158 558 138 HOH HOH . G 5 HOH AAA 159 559 144 HOH HOH . G 5 HOH AAA 160 560 111 HOH HOH . G 5 HOH AAA 161 561 69 HOH HOH . G 5 HOH AAA 162 562 109 HOH HOH . G 5 HOH AAA 163 563 159 HOH HOH . G 5 HOH AAA 164 564 127 HOH HOH . G 5 HOH AAA 165 565 37 HOH HOH . G 5 HOH AAA 166 566 73 HOH HOH . G 5 HOH AAA 167 567 140 HOH HOH . G 5 HOH AAA 168 568 139 HOH HOH . G 5 HOH AAA 169 569 116 HOH HOH . G 5 HOH AAA 170 570 54 HOH HOH . G 5 HOH AAA 171 571 98 HOH HOH . G 5 HOH AAA 172 572 173 HOH HOH . G 5 HOH AAA 173 573 100 HOH HOH . G 5 HOH AAA 174 574 172 HOH HOH . G 5 HOH AAA 175 575 145 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -8.141 13.88 2.831 1 39.79 0 C1 GOL 302 AAA 1 HETATM 2 O O1 GOL . . . C 3 -7.197 13.887 3.9 1 40.66 0 O1 GOL 302 AAA 1 HETATM 3 C C2 GOL . . . C 3 -7.778 14.833 1.704 1 30.39 0 C2 GOL 302 AAA 1 HETATM 4 O O2 GOL . . . C 3 -8.985 15.229 1.05 1 55.52 0 O2 GOL 302 AAA 1 HETATM 5 C C3 GOL . . . C 3 -7.023 16.078 2.139 1 31.39 0 C3 GOL 302 AAA 1 HETATM 6 O O3 GOL . . . C 3 -5.741 16.126 1.518 1 28.41 0 O3 GOL 302 AAA 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #