data_7ONB # _model_server_result.job_id 9EmLvlNxxMjnou-xygvgFw _model_server_result.datetime_utc '2025-01-18 06:55:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7onb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1402}' # _entry.id 7ONB # _exptl.entry_id 7ONB _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ONB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ONB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details undecameric _pdbx_struct_assembly.oligomeric_count 11 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 13 M N N ? 13 N N N ? 13 O N N ? 13 P N N ? 13 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D SG CYS 26 D CYS 26 1_555 L C23 SJT . D SJT 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? metalc ? metalc1 D SG CYS 11 D CYS 11 1_555 M ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc2 D SG CYS 23 D CYS 23 1_555 O ZN ZN . D ZN 1404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc3 D SG CYS 30 D CYS 30 1_555 N ZN ZN . D ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc4 D SG CYS 33 D CYS 33 1_555 N ZN ZN . D ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc5 D SG CYS 46 D CYS 46 1_555 M ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc6 D SG CYS 49 D CYS 49 1_555 M ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc7 D SG CYS 58 D CYS 58 1_555 O ZN ZN . D ZN 1404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc8 D SG CYS 61 D CYS 61 1_555 O ZN ZN . D ZN 1404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc9 D SG CYS 72 D CYS 72 1_555 N ZN ZN . D ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc10 D SG CYS 75 D CYS 75 1_555 N ZN ZN . D ZN 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc11 D SG CYS 85 D CYS 85 1_555 M ZN ZN . D ZN 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc12 I SG CYS 56 M CYS 56 1_555 P ZN ZN . M ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc13 I SG CYS 59 M CYS 59 1_555 P ZN ZN . M ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc14 I NE2 HIS 72 M HIS 72 1_555 P ZN ZN . M ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc15 I ND1 HIS 78 M HIS 78 1_555 P ZN ZN . M ZN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc16 J SG CYS 408 N CYS 408 1_555 Q ZN ZN . N ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc17 J SG CYS 411 N CYS 411 1_555 Q ZN ZN . N ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc18 J NE2 HIS 425 N HIS 425 1_555 Q ZN ZN . N ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc19 J ND1 HIS 431 N HIS 431 1_555 Q ZN ZN . N ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? hydrog TYPE_28_PAIR hydrog1 F N1 G 29 G G 132 1_555 G O2 U 44 H U 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog2 F O6 G 29 G G 132 1_555 G N3 U 44 H U 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 F N1 A 30 G A 133 1_555 G N3 U 43 H U 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 F N6 A 30 G A 133 1_555 G O4 U 43 H U 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog5 F N3 U 31 G U 134 1_555 G O6 G 42 H G 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog TYPE_28_PAIR hydrog6 F O2 U 31 G U 134 1_555 G N1 G 42 H G 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'G-U MISPAIR' hydrog7 F N2 G 32 G G 135 1_555 G O2 U 41 H U 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'U-G MISPAIR' hydrog8 F O4 U 33 G U 136 1_555 G N2 G 42 H G 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'C-C MISPAIR' hydrog9 F N4 C 34 G C 137 1_555 G O2 C 40 H C 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 F N1 A 35 G A 138 1_555 G N3 U 39 H U 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 F N6 A 35 G A 138 1_555 G O4 U 39 H U 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 F N3 U 36 G U 139 1_555 G N1 A 38 H A 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 F O4 U 36 G U 139 1_555 G N6 A 38 H A 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 F N1 A 37 G A 140 1_555 G N3 U 37 H U 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 F N6 A 37 G A 140 1_555 G O4 U 37 H U 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 F N3 C 38 G C 141 1_555 G N1 G 36 H G 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 F N4 C 38 G C 141 1_555 G O6 G 36 H G 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 F O2 C 38 G C 141 1_555 G N2 G 36 H G 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 F N3 U 39 G U 142 1_555 G N1 A 35 H A 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 F O4 U 39 G U 142 1_555 G N6 A 35 H A 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 G N1 A 48 H A 48 1_555 G N3 U 65 H U 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 G N6 A 48 H A 48 1_555 G O4 U 65 H U 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 G N3 U 49 H U 49 1_555 G N1 A 64 H A 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 G O4 U 49 H U 49 1_555 G N6 A 64 H A 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 G N3 C 50 H C 50 1_555 G N1 G 63 H G 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 G N4 C 50 H C 50 1_555 G O6 G 63 H G 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 G O2 C 50 H C 50 1_555 G N2 G 63 H G 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 G N1 A 51 H A 51 1_555 G N3 U 62 H U 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 G N6 A 51 H A 51 1_555 G O4 U 62 H U 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 G N1 G 52 H G 52 1_555 G N3 C 61 H C 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 G N2 G 52 H G 52 1_555 G O2 C 61 H C 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 G O6 G 52 H G 52 1_555 G N4 C 61 H C 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'U-A PAIR' hydrog33 G O2 U 54 H U 54 1_555 G N6 A 59 H A 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ONB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code L 12 SJT D 1 1401 1401 SJT SSA . M 13 ZN D 1 1402 5 ZN ZN . N 13 ZN D 1 1403 6 ZN ZN . O 13 ZN D 1 1404 7 ZN ZN . P 13 ZN M 1 501 10 ZN ZN . Q 13 ZN N 1 601 9 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 13 _atom_site.Cartn_x 265.762 _atom_site.Cartn_y 252.169 _atom_site.Cartn_z 316.414 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 109.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1402 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #