data_7OOG # _model_server_result.job_id g_obTqh5Bfcip8qH2Ibscw _model_server_result.datetime_utc '2024-11-27 22:10:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":511}' # _entry.id 7OOG # _exptl.entry_id 7OOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 173.011 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-bromanylpyridin-2-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OOG _cell.length_a 79.997 _cell.length_b 101.027 _cell.length_c 103.184 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,AA 1 1 B,R,S,T,U,V,W,X,Y,Z,BA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 M N N ? 5 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PRO 364 A PRO 390 1_555 A N CSX 365 A CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale2 A C CSX 365 A CSX 391 1_555 A N LYS 366 A LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale3 B C PRO 364 B PRO 390 1_555 B N CSX 365 B CSX 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C CSX 365 B CSX 391 1_555 B N LYS 366 B LYS 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? metalc ? metalc1 E O1B AN2 . A AN2 503 1_555 Q MG MG . A MG 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.967 ? metalc ? metalc2 Q MG MG . A MG 515 1_555 AA O HOH . A HOH 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.92 ? metalc ? metalc3 B OD1 ASP 13 B ASP 39 1_555 Z MG MG . B MG 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc4 Y O4 PO4 . B PO4 508 1_555 Z MG MG . B MG 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? # _chem_comp.formula 'C5 H5 Br N2' _chem_comp.formula_weight 173.011 _chem_comp.id HEW _chem_comp.mon_nstd_flag . _chem_comp.name 4-bromanylpyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C3 HEW sing 201 n n C4 C3 HEW doub 202 n y C4 C5 HEW sing 203 n y C3 C2 HEW sing 204 n y C5 N2 HEW doub 205 n y C2 C1 HEW doub 206 n y N2 C1 HEW sing 207 n y C1 N1 HEW sing 208 n n C4 H1 HEW sing 209 n n C5 H2 HEW sing 210 n n N1 H3 HEW sing 211 n n N1 H4 HEW sing 212 n n C2 H5 HEW sing 213 n n # _atom_sites.entry_id 7OOG _atom_sites.fract_transf_matrix[1][1] 0.0125 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009691 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 501 504 GOL GOL . D 3 PG4 A 1 502 1001 PG4 PG4 . E 4 AN2 A 1 503 1301 AN2 AN2 . F 2 GOL A 1 504 1401 GOL GOL . G 2 GOL A 1 505 1501 GOL GOL . H 2 GOL A 1 506 1601 GOL GOL . I 2 GOL A 1 507 1701 GOL GOL . J 2 GOL A 1 508 1801 GOL GOL . K 2 GOL A 1 509 1901 GOL GOL . L 2 GOL A 1 510 2001 GOL GOL . M 5 HEW A 1 511 2101 HEW LIG . N 6 PO4 A 1 512 1 PO4 PO4 . O 7 CL A 1 513 1 CL CL . P 7 CL A 1 514 2 CL CL . Q 8 MG A 1 515 1 MG MG . R 2 GOL B 1 501 503 GOL GOL . S 4 AN2 B 1 502 1101 AN2 AN2 . T 2 GOL B 1 503 1201 GOL GOL . U 2 GOL B 1 504 1401 GOL GOL . V 2 GOL B 1 505 1501 GOL GOL . W 2 GOL B 1 506 1701 GOL GOL . X 5 HEW B 1 511 2101 HEW LIG . Y 6 PO4 B 1 508 2 PO4 PO4 . Z 8 MG B 1 509 2 MG MG . AA 9 HOH A 1 601 76 HOH HOH . AA 9 HOH A 2 602 290 HOH HOH . AA 9 HOH A 3 603 601 HOH HOH . AA 9 HOH A 4 604 145 HOH HOH . AA 9 HOH A 5 605 272 HOH HOH . AA 9 HOH A 6 606 608 HOH HOH . AA 9 HOH A 7 607 357 HOH HOH . AA 9 HOH A 8 608 121 HOH HOH . AA 9 HOH A 9 609 341 HOH HOH . AA 9 HOH A 10 610 353 HOH HOH . AA 9 HOH A 11 611 653 HOH HOH . AA 9 HOH A 12 612 633 HOH HOH . AA 9 HOH A 13 613 355 HOH HOH . AA 9 HOH A 14 614 776 HOH HOH . AA 9 HOH A 15 615 680 HOH HOH . AA 9 HOH A 16 616 624 HOH HOH . AA 9 HOH A 17 617 108 HOH HOH . AA 9 HOH A 18 618 636 HOH HOH . AA 9 HOH A 19 619 642 HOH HOH . AA 9 HOH A 20 620 675 HOH HOH . AA 9 HOH A 21 621 663 HOH HOH . AA 9 HOH A 22 622 701 HOH HOH . AA 9 HOH A 23 623 699 HOH HOH . AA 9 HOH A 24 624 342 HOH HOH . AA 9 HOH A 25 625 337 HOH HOH . AA 9 HOH A 26 626 656 HOH HOH . AA 9 HOH A 27 627 707 HOH HOH . AA 9 HOH A 28 628 728 HOH HOH . AA 9 HOH A 29 629 788 HOH HOH . AA 9 HOH A 30 630 720 HOH HOH . AA 9 HOH A 31 631 692 HOH HOH . AA 9 HOH A 32 632 674 HOH HOH . AA 9 HOH A 33 633 687 HOH HOH . AA 9 HOH A 34 634 328 HOH HOH . AA 9 HOH A 35 635 695 HOH HOH . AA 9 HOH A 36 636 668 HOH HOH . AA 9 HOH A 37 637 135 HOH HOH . AA 9 HOH A 38 638 658 HOH HOH . AA 9 HOH A 39 639 706 HOH HOH . AA 9 HOH A 40 640 712 HOH HOH . AA 9 HOH A 41 641 351 HOH HOH . AA 9 HOH A 42 642 715 HOH HOH . AA 9 HOH A 43 643 206 HOH HOH . AA 9 HOH A 44 644 708 HOH HOH . AA 9 HOH A 45 645 218 HOH HOH . AA 9 HOH A 46 646 264 HOH HOH . AA 9 HOH A 47 647 689 HOH HOH . AA 9 HOH A 48 648 734 HOH HOH . AA 9 HOH A 49 649 686 HOH HOH . AA 9 HOH A 50 650 726 HOH HOH . AA 9 HOH A 51 651 289 HOH HOH . AA 9 HOH A 52 652 717 HOH HOH . AA 9 HOH A 53 653 265 HOH HOH . AA 9 HOH A 54 654 286 HOH HOH . AA 9 HOH A 55 655 605 HOH HOH . AA 9 HOH A 56 656 313 HOH HOH . AA 9 HOH A 57 657 344 HOH HOH . AA 9 HOH A 58 658 748 HOH HOH . AA 9 HOH A 59 659 133 HOH HOH . AA 9 HOH A 60 660 13 HOH HOH . AA 9 HOH A 61 661 759 HOH HOH . AA 9 HOH A 62 662 343 HOH HOH . AA 9 HOH A 63 663 233 HOH HOH . AA 9 HOH A 64 664 349 HOH HOH . AA 9 HOH A 65 665 321 HOH HOH . AA 9 HOH A 66 666 760 HOH HOH . AA 9 HOH A 67 667 319 HOH HOH . AA 9 HOH A 68 668 767 HOH HOH . AA 9 HOH A 69 669 114 HOH HOH . AA 9 HOH A 70 670 227 HOH HOH . AA 9 HOH A 71 671 334 HOH HOH . AA 9 HOH A 72 672 207 HOH HOH . AA 9 HOH A 73 673 768 HOH HOH . AA 9 HOH A 74 674 729 HOH HOH . AA 9 HOH A 75 675 273 HOH HOH . AA 9 HOH A 76 676 269 HOH HOH . AA 9 HOH A 77 677 255 HOH HOH . AA 9 HOH A 78 678 308 HOH HOH . AA 9 HOH A 79 679 331 HOH HOH . AA 9 HOH A 80 680 782 HOH HOH . AA 9 HOH A 81 681 775 HOH HOH . AA 9 HOH A 82 682 97 HOH HOH . AA 9 HOH A 83 683 311 HOH HOH . AA 9 HOH A 84 684 340 HOH HOH . AA 9 HOH A 85 685 651 HOH HOH . AA 9 HOH A 86 686 51 HOH HOH . AA 9 HOH A 87 687 166 HOH HOH . AA 9 HOH A 88 688 659 HOH HOH . AA 9 HOH A 89 689 324 HOH HOH . AA 9 HOH A 90 690 352 HOH HOH . AA 9 HOH A 91 691 257 HOH HOH . AA 9 HOH A 92 692 167 HOH HOH . AA 9 HOH A 93 693 326 HOH HOH . AA 9 HOH A 94 694 346 HOH HOH . AA 9 HOH A 95 695 151 HOH HOH . BA 9 HOH B 1 601 173 HOH HOH . BA 9 HOH B 2 602 356 HOH HOH . BA 9 HOH B 3 603 604 HOH HOH . BA 9 HOH B 4 604 168 HOH HOH . BA 9 HOH B 5 605 620 HOH HOH . BA 9 HOH B 6 606 159 HOH HOH . BA 9 HOH B 7 607 339 HOH HOH . BA 9 HOH B 8 608 643 HOH HOH . BA 9 HOH B 9 609 180 HOH HOH . BA 9 HOH B 10 610 335 HOH HOH . BA 9 HOH B 11 611 333 HOH HOH . BA 9 HOH B 12 612 642 HOH HOH . BA 9 HOH B 13 613 656 HOH HOH . BA 9 HOH B 14 614 639 HOH HOH . BA 9 HOH B 15 615 174 HOH HOH . BA 9 HOH B 16 616 181 HOH HOH . BA 9 HOH B 17 617 702 HOH HOH . BA 9 HOH B 18 618 336 HOH HOH . BA 9 HOH B 19 619 354 HOH HOH . BA 9 HOH B 20 620 645 HOH HOH . BA 9 HOH B 21 621 682 HOH HOH . BA 9 HOH B 22 622 330 HOH HOH . BA 9 HOH B 23 623 189 HOH HOH . BA 9 HOH B 24 624 332 HOH HOH . BA 9 HOH B 25 625 703 HOH HOH . BA 9 HOH B 26 626 345 HOH HOH . BA 9 HOH B 27 627 7 HOH HOH . BA 9 HOH B 28 628 310 HOH HOH . BA 9 HOH B 29 629 678 HOH HOH . BA 9 HOH B 30 630 329 HOH HOH . BA 9 HOH B 31 631 683 HOH HOH . BA 9 HOH B 32 632 350 HOH HOH . BA 9 HOH B 33 633 803 HOH HOH . BA 9 HOH B 34 634 348 HOH HOH . BA 9 HOH B 35 635 681 HOH HOH . BA 9 HOH B 36 636 74 HOH HOH . BA 9 HOH B 37 637 309 HOH HOH . BA 9 HOH B 38 638 623 HOH HOH . BA 9 HOH B 39 639 666 HOH HOH . BA 9 HOH B 40 640 347 HOH HOH . BA 9 HOH B 41 641 325 HOH HOH . BA 9 HOH B 42 642 660 HOH HOH . BA 9 HOH B 43 643 315 HOH HOH . BA 9 HOH B 44 644 307 HOH HOH . BA 9 HOH B 45 645 338 HOH HOH . BA 9 HOH B 46 646 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 HEW . . . X 5 54.53 77.402 4.685 0.72 124.98 ? C4 HEW 511 B 1 HETATM 2 C C5 HEW . . . X 5 54.595 78.634 5.292 0.72 124.77 ? C5 HEW 511 B 1 HETATM 3 N N1 HEW . . . X 5 51.962 78.554 7.612 0.72 124.2 ? N1 HEW 511 B 1 HETATM 4 N N2 HEW . . . X 5 53.747 79.017 6.261 0.72 124.66 ? N2 HEW 511 B 1 HETATM 5 C C3 HEW . . . X 5 53.553 76.507 5.088 0.72 125.07 ? C3 HEW 511 B 1 HETATM 6 C C1 HEW . . . X 5 52.788 78.144 6.65 0.72 124.52 ? C1 HEW 511 B 1 HETATM 7 C C2 HEW . . . X 5 52.667 76.865 6.079 0.72 124.78 ? C2 HEW 511 B 1 HETATM 8 BR BR1 HEW . . . X 5 53.445 74.79 4.274 0.72 125.48 ? BR1 HEW 511 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #