data_7OPZ # _model_server_result.job_id RSq7oFulwOziJ9_fcG9i-A _model_server_result.datetime_utc '2024-11-25 18:40:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7opz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":702}' # _entry.id 7OPZ # _exptl.entry_id 7OPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OPZ _cell.length_a 50.832 _cell.length_b 150.151 _cell.length_c 191.785 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,J,K 1 1 C,D,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 86 C LEU 85 1_555 A N CSO 87 C CSO 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C CSO 87 C CSO 86 1_555 A N GLY 88 C GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale3 B C LEU 86 A LEU 85 1_555 B N CSO 87 A CSO 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 B C CSO 87 A CSO 86 1_555 B N GLY 88 A GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale5 C C LEU 86 B LEU 85 1_555 C N CSO 87 B CSO 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 C C CSO 87 B CSO 86 1_555 C N GLY 88 B GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale7 D C LEU 86 D LEU 85 1_555 D N CSO 87 D CSO 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 D C CSO 87 D CSO 86 1_555 D N GLY 88 D GLY 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 F NA NA . C NA 702 1_555 J O HOH . C HOH 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc2 F NA NA . C NA 702 1_555 J O HOH . C HOH 848 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7OPZ _atom_sites.fract_transf_matrix[1][1] 0.019673 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005214 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GSH C 1 701 701 GSH GSH . F 3 NA C 1 702 1 NA NA . G 2 GSH A 1 701 701 GSH GSH . H 2 GSH B 1 701 701 GSH GSH . I 2 GSH D 1 701 701 GSH GSH . J 4 HOH C 1 801 37 HOH HOH . J 4 HOH C 2 802 22 HOH HOH . J 4 HOH C 3 803 26 HOH HOH . J 4 HOH C 4 804 96 HOH HOH . J 4 HOH C 5 805 38 HOH HOH . J 4 HOH C 6 806 167 HOH HOH . J 4 HOH C 7 807 244 HOH HOH . J 4 HOH C 8 808 25 HOH HOH . J 4 HOH C 9 809 221 HOH HOH . J 4 HOH C 10 810 88 HOH HOH . J 4 HOH C 11 811 95 HOH HOH . J 4 HOH C 12 812 214 HOH HOH . J 4 HOH C 13 813 46 HOH HOH . J 4 HOH C 14 814 10 HOH HOH . J 4 HOH C 15 815 29 HOH HOH . J 4 HOH C 16 816 9 HOH HOH . J 4 HOH C 17 817 44 HOH HOH . J 4 HOH C 18 818 73 HOH HOH . J 4 HOH C 19 819 8 HOH HOH . J 4 HOH C 20 820 56 HOH HOH . J 4 HOH C 21 821 17 HOH HOH . J 4 HOH C 22 822 184 HOH HOH . J 4 HOH C 23 823 2 HOH HOH . J 4 HOH C 24 824 84 HOH HOH . J 4 HOH C 25 825 57 HOH HOH . J 4 HOH C 26 826 5 HOH HOH . J 4 HOH C 27 827 18 HOH HOH . J 4 HOH C 28 828 21 HOH HOH . J 4 HOH C 29 829 123 HOH HOH . J 4 HOH C 30 830 4 HOH HOH . J 4 HOH C 31 831 42 HOH HOH . J 4 HOH C 32 832 59 HOH HOH . J 4 HOH C 33 833 33 HOH HOH . J 4 HOH C 34 834 80 HOH HOH . J 4 HOH C 35 835 183 HOH HOH . J 4 HOH C 36 836 104 HOH HOH . J 4 HOH C 37 837 97 HOH HOH . J 4 HOH C 38 838 70 HOH HOH . J 4 HOH C 39 839 12 HOH HOH . J 4 HOH C 40 840 83 HOH HOH . J 4 HOH C 41 841 92 HOH HOH . J 4 HOH C 42 842 135 HOH HOH . J 4 HOH C 43 843 87 HOH HOH . J 4 HOH C 44 844 164 HOH HOH . J 4 HOH C 45 845 27 HOH HOH . J 4 HOH C 46 846 48 HOH HOH . J 4 HOH C 47 847 229 HOH HOH . J 4 HOH C 48 848 180 HOH HOH . J 4 HOH C 49 849 150 HOH HOH . J 4 HOH C 50 850 137 HOH HOH . J 4 HOH C 51 851 166 HOH HOH . J 4 HOH C 52 852 147 HOH HOH . J 4 HOH C 53 853 76 HOH HOH . J 4 HOH C 54 854 236 HOH HOH . J 4 HOH C 55 855 136 HOH HOH . J 4 HOH C 56 856 234 HOH HOH . J 4 HOH C 57 857 114 HOH HOH . J 4 HOH C 58 858 241 HOH HOH . J 4 HOH C 59 859 158 HOH HOH . J 4 HOH C 60 860 115 HOH HOH . J 4 HOH C 61 861 155 HOH HOH . J 4 HOH C 62 862 130 HOH HOH . J 4 HOH C 63 863 86 HOH HOH . J 4 HOH C 64 864 190 HOH HOH . J 4 HOH C 65 865 54 HOH HOH . J 4 HOH C 66 866 131 HOH HOH . J 4 HOH C 67 867 231 HOH HOH . J 4 HOH C 68 868 228 HOH HOH . J 4 HOH C 69 869 50 HOH HOH . J 4 HOH C 70 870 143 HOH HOH . J 4 HOH C 71 871 211 HOH HOH . J 4 HOH C 72 872 179 HOH HOH . J 4 HOH C 73 873 232 HOH HOH . J 4 HOH C 74 874 112 HOH HOH . J 4 HOH C 75 875 186 HOH HOH . J 4 HOH C 76 876 201 HOH HOH . J 4 HOH C 77 877 154 HOH HOH . J 4 HOH C 78 878 174 HOH HOH . J 4 HOH C 79 879 207 HOH HOH . J 4 HOH C 80 880 227 HOH HOH . J 4 HOH C 81 881 203 HOH HOH . J 4 HOH C 82 882 182 HOH HOH . J 4 HOH C 83 883 209 HOH HOH . J 4 HOH C 84 884 117 HOH HOH . J 4 HOH C 85 885 100 HOH HOH . J 4 HOH C 86 886 178 HOH HOH . J 4 HOH C 87 887 238 HOH HOH . J 4 HOH C 88 888 202 HOH HOH . J 4 HOH C 89 889 200 HOH HOH . J 4 HOH C 90 890 199 HOH HOH . J 4 HOH C 91 891 160 HOH HOH . J 4 HOH C 92 892 188 HOH HOH . J 4 HOH C 93 893 156 HOH HOH . J 4 HOH C 94 894 224 HOH HOH . J 4 HOH C 95 895 226 HOH HOH . J 4 HOH C 96 896 204 HOH HOH . J 4 HOH C 97 897 194 HOH HOH . J 4 HOH C 98 898 172 HOH HOH . J 4 HOH C 99 899 217 HOH HOH . J 4 HOH C 100 900 220 HOH HOH . J 4 HOH C 101 901 245 HOH HOH . J 4 HOH C 102 902 240 HOH HOH . J 4 HOH C 103 903 250 HOH HOH . J 4 HOH C 104 904 243 HOH HOH . J 4 HOH C 105 905 206 HOH HOH . J 4 HOH C 106 906 251 HOH HOH . K 4 HOH A 1 801 60 HOH HOH . K 4 HOH A 2 802 195 HOH HOH . K 4 HOH A 3 803 41 HOH HOH . K 4 HOH A 4 804 118 HOH HOH . K 4 HOH A 5 805 20 HOH HOH . K 4 HOH A 6 806 14 HOH HOH . K 4 HOH A 7 807 30 HOH HOH . K 4 HOH A 8 808 35 HOH HOH . K 4 HOH A 9 809 6 HOH HOH . K 4 HOH A 10 810 94 HOH HOH . K 4 HOH A 11 811 192 HOH HOH . K 4 HOH A 12 812 13 HOH HOH . K 4 HOH A 13 813 52 HOH HOH . K 4 HOH A 14 814 61 HOH HOH . K 4 HOH A 15 815 47 HOH HOH . K 4 HOH A 16 816 90 HOH HOH . K 4 HOH A 17 817 65 HOH HOH . K 4 HOH A 18 818 223 HOH HOH . K 4 HOH A 19 819 132 HOH HOH . K 4 HOH A 20 820 68 HOH HOH . K 4 HOH A 21 821 1 HOH HOH . K 4 HOH A 22 822 213 HOH HOH . K 4 HOH A 23 823 3 HOH HOH . K 4 HOH A 24 824 219 HOH HOH . K 4 HOH A 25 825 134 HOH HOH . K 4 HOH A 26 826 99 HOH HOH . K 4 HOH A 27 827 149 HOH HOH . K 4 HOH A 28 828 15 HOH HOH . K 4 HOH A 29 829 161 HOH HOH . K 4 HOH A 30 830 176 HOH HOH . K 4 HOH A 31 831 72 HOH HOH . K 4 HOH A 32 832 69 HOH HOH . K 4 HOH A 33 833 210 HOH HOH . K 4 HOH A 34 834 145 HOH HOH . K 4 HOH A 35 835 151 HOH HOH . K 4 HOH A 36 836 120 HOH HOH . K 4 HOH A 37 837 205 HOH HOH . K 4 HOH A 38 838 152 HOH HOH . K 4 HOH A 39 839 146 HOH HOH . K 4 HOH A 40 840 189 HOH HOH . K 4 HOH A 41 841 212 HOH HOH . K 4 HOH A 42 842 82 HOH HOH . K 4 HOH A 43 843 177 HOH HOH . K 4 HOH A 44 844 148 HOH HOH . K 4 HOH A 45 845 142 HOH HOH . K 4 HOH A 46 846 128 HOH HOH . K 4 HOH A 47 847 185 HOH HOH . K 4 HOH A 48 848 141 HOH HOH . K 4 HOH A 49 849 208 HOH HOH . K 4 HOH A 50 850 218 HOH HOH . K 4 HOH A 51 851 193 HOH HOH . L 4 HOH B 1 801 125 HOH HOH . L 4 HOH B 2 802 34 HOH HOH . L 4 HOH B 3 803 36 HOH HOH . L 4 HOH B 4 804 163 HOH HOH . L 4 HOH B 5 805 39 HOH HOH . L 4 HOH B 6 806 43 HOH HOH . L 4 HOH B 7 807 40 HOH HOH . L 4 HOH B 8 808 119 HOH HOH . L 4 HOH B 9 809 74 HOH HOH . L 4 HOH B 10 810 170 HOH HOH . L 4 HOH B 11 811 91 HOH HOH . L 4 HOH B 12 812 19 HOH HOH . L 4 HOH B 13 813 242 HOH HOH . L 4 HOH B 14 814 165 HOH HOH . L 4 HOH B 15 815 58 HOH HOH . L 4 HOH B 16 816 197 HOH HOH . L 4 HOH B 17 817 67 HOH HOH . L 4 HOH B 18 818 79 HOH HOH . L 4 HOH B 19 819 247 HOH HOH . L 4 HOH B 20 820 101 HOH HOH . L 4 HOH B 21 821 7 HOH HOH . L 4 HOH B 22 822 66 HOH HOH . L 4 HOH B 23 823 51 HOH HOH . L 4 HOH B 24 824 108 HOH HOH . L 4 HOH B 25 825 105 HOH HOH . L 4 HOH B 26 826 63 HOH HOH . L 4 HOH B 27 827 31 HOH HOH . L 4 HOH B 28 828 157 HOH HOH . L 4 HOH B 29 829 49 HOH HOH . L 4 HOH B 30 830 144 HOH HOH . L 4 HOH B 31 831 62 HOH HOH . L 4 HOH B 32 832 71 HOH HOH . L 4 HOH B 33 833 85 HOH HOH . L 4 HOH B 34 834 248 HOH HOH . L 4 HOH B 35 835 153 HOH HOH . L 4 HOH B 36 836 102 HOH HOH . L 4 HOH B 37 837 45 HOH HOH . L 4 HOH B 38 838 140 HOH HOH . L 4 HOH B 39 839 121 HOH HOH . L 4 HOH B 40 840 116 HOH HOH . L 4 HOH B 41 841 111 HOH HOH . L 4 HOH B 42 842 81 HOH HOH . L 4 HOH B 43 843 196 HOH HOH . L 4 HOH B 44 844 89 HOH HOH . L 4 HOH B 45 845 113 HOH HOH . L 4 HOH B 46 846 246 HOH HOH . L 4 HOH B 47 847 23 HOH HOH . L 4 HOH B 48 848 138 HOH HOH . L 4 HOH B 49 849 129 HOH HOH . L 4 HOH B 50 850 191 HOH HOH . L 4 HOH B 51 851 93 HOH HOH . L 4 HOH B 52 852 222 HOH HOH . L 4 HOH B 53 853 133 HOH HOH . L 4 HOH B 54 854 139 HOH HOH . L 4 HOH B 55 855 249 HOH HOH . L 4 HOH B 56 856 173 HOH HOH . L 4 HOH B 57 857 169 HOH HOH . L 4 HOH B 58 858 107 HOH HOH . L 4 HOH B 59 859 78 HOH HOH . L 4 HOH B 60 860 239 HOH HOH . L 4 HOH B 61 861 162 HOH HOH . L 4 HOH B 62 862 175 HOH HOH . L 4 HOH B 63 863 235 HOH HOH . M 4 HOH D 1 801 168 HOH HOH . M 4 HOH D 2 802 24 HOH HOH . M 4 HOH D 3 803 53 HOH HOH . M 4 HOH D 4 804 16 HOH HOH . M 4 HOH D 5 805 32 HOH HOH . M 4 HOH D 6 806 110 HOH HOH . M 4 HOH D 7 807 215 HOH HOH . M 4 HOH D 8 808 77 HOH HOH . M 4 HOH D 9 809 230 HOH HOH . M 4 HOH D 10 810 159 HOH HOH . M 4 HOH D 11 811 11 HOH HOH . M 4 HOH D 12 812 28 HOH HOH . M 4 HOH D 13 813 187 HOH HOH . M 4 HOH D 14 814 75 HOH HOH . M 4 HOH D 15 815 124 HOH HOH . M 4 HOH D 16 816 122 HOH HOH . M 4 HOH D 17 817 216 HOH HOH . M 4 HOH D 18 818 64 HOH HOH . M 4 HOH D 19 819 181 HOH HOH . M 4 HOH D 20 820 98 HOH HOH . M 4 HOH D 21 821 55 HOH HOH . M 4 HOH D 22 822 198 HOH HOH . M 4 HOH D 23 823 225 HOH HOH . M 4 HOH D 24 824 103 HOH HOH . M 4 HOH D 25 825 233 HOH HOH . M 4 HOH D 26 826 106 HOH HOH . M 4 HOH D 27 827 126 HOH HOH . M 4 HOH D 28 828 237 HOH HOH . M 4 HOH D 29 829 171 HOH HOH . M 4 HOH D 30 830 109 HOH HOH . M 4 HOH D 31 831 127 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x -24.013 _atom_site.Cartn_y 29.571 _atom_site.Cartn_z -52.206 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 702 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 391 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #