data_7OQX # _model_server_result.job_id x2YtYiaapj-jcsKnh9AH6Q _model_server_result.datetime_utc '2025-01-14 22:57:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oqx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":413}' # _entry.id 7OQX # _exptl.entry_id 7OQX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OQX _cell.length_a 69.8 _cell.length_b 69.8 _cell.length_c 290.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OQX _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 170 n n C1 C2 GOL sing 171 n n C1 H11 GOL sing 172 n n C1 H12 GOL sing 173 n n O1 HO1 GOL sing 174 n n C2 O2 GOL sing 175 n n C2 C3 GOL sing 176 n n C2 H2 GOL sing 177 n n O2 HO2 GOL sing 178 n n C3 O3 GOL sing 179 n n C3 H31 GOL sing 180 n n C3 H32 GOL sing 181 n n O3 HO3 GOL sing 182 n n # _atom_sites.entry_id 7OQX _atom_sites.fract_transf_matrix[1][1] 0.014327 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014327 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003438 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2TM A 1 401 1 2TM 2TM . C 3 PO4 A 1 402 2 PO4 PO4 . D 3 PO4 A 1 403 3 PO4 PO4 . E 4 ACT A 1 404 4 ACT ACT . F 4 ACT A 1 405 5 ACT ACT . G 4 ACT A 1 406 6 ACT ACT . H 4 ACT A 1 407 7 ACT ACT . I 4 ACT A 1 408 8 ACT ACT . J 4 ACT A 1 409 9 ACT ACT . K 4 ACT A 1 410 10 ACT ACT . L 4 ACT A 1 411 11 ACT ACT . M 4 ACT A 1 412 12 ACT ACT . N 5 GOL A 1 413 13 GOL GOL . O 6 HOH A 1 501 74 HOH HOH . O 6 HOH A 2 502 80 HOH HOH . O 6 HOH A 3 503 106 HOH HOH . O 6 HOH A 4 504 75 HOH HOH . O 6 HOH A 5 505 58 HOH HOH . O 6 HOH A 6 506 109 HOH HOH . O 6 HOH A 7 507 33 HOH HOH . O 6 HOH A 8 508 53 HOH HOH . O 6 HOH A 9 509 63 HOH HOH . O 6 HOH A 10 510 60 HOH HOH . O 6 HOH A 11 511 71 HOH HOH . O 6 HOH A 12 512 30 HOH HOH . O 6 HOH A 13 513 27 HOH HOH . O 6 HOH A 14 514 99 HOH HOH . O 6 HOH A 15 515 29 HOH HOH . O 6 HOH A 16 516 90 HOH HOH . O 6 HOH A 17 517 45 HOH HOH . O 6 HOH A 18 518 26 HOH HOH . O 6 HOH A 19 519 66 HOH HOH . O 6 HOH A 20 520 88 HOH HOH . O 6 HOH A 21 521 16 HOH HOH . O 6 HOH A 22 522 20 HOH HOH . O 6 HOH A 23 523 95 HOH HOH . O 6 HOH A 24 524 24 HOH HOH . O 6 HOH A 25 525 42 HOH HOH . O 6 HOH A 26 526 48 HOH HOH . O 6 HOH A 27 527 15 HOH HOH . O 6 HOH A 28 528 23 HOH HOH . O 6 HOH A 29 529 78 HOH HOH . O 6 HOH A 30 530 62 HOH HOH . O 6 HOH A 31 531 110 HOH HOH . O 6 HOH A 32 532 17 HOH HOH . O 6 HOH A 33 533 41 HOH HOH . O 6 HOH A 34 534 21 HOH HOH . O 6 HOH A 35 535 67 HOH HOH . O 6 HOH A 36 536 65 HOH HOH . O 6 HOH A 37 537 70 HOH HOH . O 6 HOH A 38 538 61 HOH HOH . O 6 HOH A 39 539 47 HOH HOH . O 6 HOH A 40 540 55 HOH HOH . O 6 HOH A 41 541 18 HOH HOH . O 6 HOH A 42 542 94 HOH HOH . O 6 HOH A 43 543 19 HOH HOH . O 6 HOH A 44 544 34 HOH HOH . O 6 HOH A 45 545 102 HOH HOH . O 6 HOH A 46 546 98 HOH HOH . O 6 HOH A 47 547 14 HOH HOH . O 6 HOH A 48 548 108 HOH HOH . O 6 HOH A 49 549 79 HOH HOH . O 6 HOH A 50 550 31 HOH HOH . O 6 HOH A 51 551 73 HOH HOH . O 6 HOH A 52 552 32 HOH HOH . O 6 HOH A 53 553 97 HOH HOH . O 6 HOH A 54 554 103 HOH HOH . O 6 HOH A 55 555 101 HOH HOH . O 6 HOH A 56 556 39 HOH HOH . O 6 HOH A 57 557 89 HOH HOH . O 6 HOH A 58 558 100 HOH HOH . O 6 HOH A 59 559 44 HOH HOH . O 6 HOH A 60 560 104 HOH HOH . O 6 HOH A 61 561 76 HOH HOH . O 6 HOH A 62 562 107 HOH HOH . O 6 HOH A 63 563 28 HOH HOH . O 6 HOH A 64 564 36 HOH HOH . O 6 HOH A 65 565 77 HOH HOH . O 6 HOH A 66 566 59 HOH HOH . O 6 HOH A 67 567 68 HOH HOH . O 6 HOH A 68 568 84 HOH HOH . O 6 HOH A 69 569 87 HOH HOH . O 6 HOH A 70 570 82 HOH HOH . O 6 HOH A 71 571 93 HOH HOH . O 6 HOH A 72 572 56 HOH HOH . O 6 HOH A 73 573 25 HOH HOH . O 6 HOH A 74 574 49 HOH HOH . O 6 HOH A 75 575 46 HOH HOH . O 6 HOH A 76 576 105 HOH HOH . O 6 HOH A 77 577 69 HOH HOH . O 6 HOH A 78 578 40 HOH HOH . O 6 HOH A 79 579 72 HOH HOH . O 6 HOH A 80 580 85 HOH HOH . O 6 HOH A 81 581 38 HOH HOH . O 6 HOH A 82 582 86 HOH HOH . O 6 HOH A 83 583 50 HOH HOH . O 6 HOH A 84 584 37 HOH HOH . O 6 HOH A 85 585 57 HOH HOH . O 6 HOH A 86 586 43 HOH HOH . O 6 HOH A 87 587 92 HOH HOH . O 6 HOH A 88 588 64 HOH HOH . O 6 HOH A 89 589 96 HOH HOH . O 6 HOH A 90 590 52 HOH HOH . O 6 HOH A 91 591 111 HOH HOH . O 6 HOH A 92 592 81 HOH HOH . O 6 HOH A 93 593 22 HOH HOH . O 6 HOH A 94 594 51 HOH HOH . O 6 HOH A 95 595 91 HOH HOH . O 6 HOH A 96 596 112 HOH HOH . O 6 HOH A 97 597 83 HOH HOH . O 6 HOH A 98 598 35 HOH HOH . O 6 HOH A 99 599 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 5 30.852 50.688 31.275 1 68.75 ? C1 GOL 413 A 1 HETATM 2 O O1 GOL . . . N 5 30.346 50.803 29.948 1 77.48 ? O1 GOL 413 A 1 HETATM 3 C C2 GOL . . . N 5 30.206 49.544 32.032 1 78.92 ? C2 GOL 413 A 1 HETATM 4 O O2 GOL . . . N 5 30.623 49.562 33.397 1 71.11 ? O2 GOL 413 A 1 HETATM 5 C C3 GOL . . . N 5 28.694 49.541 31.961 1 82.65 ? C3 GOL 413 A 1 HETATM 6 O O3 GOL . . . N 5 28.225 48.776 30.854 1 76.96 ? O3 GOL 413 A 1 HETATM 7 H H11 GOL . . . N 5 30.693 51.535 31.757 1 82.47 ? H11 GOL 413 A 1 HETATM 8 H H12 GOL . . . N 5 31.824 50.534 31.231 1 82.47 ? H12 GOL 413 A 1 HETATM 9 H HO1 GOL . . . N 5 29.916 51.529 29.893 1 92.95 ? HO1 GOL 413 A 1 HETATM 10 H H2 GOL . . . N 5 30.522 48.703 31.628 1 94.68 ? H2 GOL 413 A 1 HETATM 11 H HO2 GOL . . . N 5 30.375 50.287 33.756 1 85.3 ? HO2 GOL 413 A 1 HETATM 12 H H31 GOL . . . N 5 28.368 50.47 31.879 1 99.16 ? H31 GOL 413 A 1 HETATM 13 H H32 GOL . . . N 5 28.332 49.158 32.796 1 99.16 ? H32 GOL 413 A 1 HETATM 14 H HO3 GOL . . . N 5 28.373 49.217 30.147 1 92.32 ? HO3 GOL 413 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 14 #