data_7ORV
#
_model_server_result.job_id            JkfJ1VzeUnQhVaM5slwjYw 
_model_server_result.datetime_utc      '2024-11-13 18:45:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7orv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":205}' 
#
_entry.id    7ORV 
#
_exptl.entry_id    7ORV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              137.182 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N~4~,N~4~-dimethylpyridine-2,4-diamine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ORV 
_cell.length_a            107.236 
_cell.length_b            107.236 
_cell.length_c            107.236 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ORV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        199 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 21 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 68 A CYS 74 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc2 A SG CYS 71 A CYS 77 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? 
metalc ? metalc3 A NE2 HIS 77 A HIS 83 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc4 A SG CYS 84 A CYS 90 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc5 A SG CYS 111 A CYS 117 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc6 A SG CYS 114 A CYS 120 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? 
metalc ? metalc7 A SG CYS 122 A CYS 128 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc8 A SG CYS 124 A CYS 130 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
#
_chem_comp.formula           'C7 H11 N3' 
_chem_comp.formula_weight    137.182 
_chem_comp.id                X4V 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N~4~,N~4~-dimethylpyridine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N2 C5 X4V doub 398 n y 
N2 C6 X4V sing 399 n y 
N3 C6 X4V sing 400 n n 
C5 C4 X4V sing 401 n y 
C6 C7 X4V doub 402 n y 
C4 C3 X4V doub 403 n y 
C7 C3 X4V sing 404 n y 
C3 N1 X4V sing 405 n n 
N1 C1 X4V sing 406 n n 
N1 C2 X4V sing 407 n n 
C1 H1 X4V sing 408 n n 
C1 H2 X4V sing 409 n n 
C1 H3 X4V sing 410 n n 
C2 H4 X4V sing 411 n n 
C2 H5 X4V sing 412 n n 
C2 H6 X4V sing 413 n n 
C4 H7 X4V sing 414 n n 
C5 H8 X4V sing 415 n n 
C7 H9 X4V sing 416 n n 
N3 H10 X4V sing 417 n n 
N3 H11 X4V sing 418 n n 
#
_atom_sites.entry_id                     7ORV 
_atom_sites.fract_transf_matrix[1][1]    0.009325 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009325 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009325 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 201 201 ZN ZN . 
C 2 ZN A 1 202 202 ZN ZN . 
D 3 DMS A 1 203 203 DMS DMS . 
E 3 DMS A 1 204 204 DMS DMS . 
F 4 X4V A 1 205 205 X4V DRG . 
G 5 GOL A 1 206 206 GOL GOL . 
H 6 CL A 1 207 1 CL CL . 
I 6 CL A 1 208 2 CL CL . 
J 6 CL A 1 209 3 CL CL . 
K 7 HOH A 1 301 104 HOH HOH . 
K 7 HOH A 2 302 21 HOH HOH . 
K 7 HOH A 3 303 75 HOH HOH . 
K 7 HOH A 4 304 83 HOH HOH . 
K 7 HOH A 5 305 85 HOH HOH . 
K 7 HOH A 6 306 67 HOH HOH . 
K 7 HOH A 7 307 89 HOH HOH . 
K 7 HOH A 8 308 59 HOH HOH . 
K 7 HOH A 9 309 27 HOH HOH . 
K 7 HOH A 10 310 22 HOH HOH . 
K 7 HOH A 11 311 34 HOH HOH . 
K 7 HOH A 12 312 55 HOH HOH . 
K 7 HOH A 13 313 81 HOH HOH . 
K 7 HOH A 14 314 15 HOH HOH . 
K 7 HOH A 15 315 28 HOH HOH . 
K 7 HOH A 16 316 36 HOH HOH . 
K 7 HOH A 17 317 69 HOH HOH . 
K 7 HOH A 18 318 30 HOH HOH . 
K 7 HOH A 19 319 50 HOH HOH . 
K 7 HOH A 20 320 37 HOH HOH . 
K 7 HOH A 21 321 92 HOH HOH . 
K 7 HOH A 22 322 76 HOH HOH . 
K 7 HOH A 23 323 42 HOH HOH . 
K 7 HOH A 24 324 26 HOH HOH . 
K 7 HOH A 25 325 4 HOH HOH . 
K 7 HOH A 26 326 64 HOH HOH . 
K 7 HOH A 27 327 23 HOH HOH . 
K 7 HOH A 28 328 103 HOH HOH . 
K 7 HOH A 29 329 5 HOH HOH . 
K 7 HOH A 30 330 2 HOH HOH . 
K 7 HOH A 31 331 14 HOH HOH . 
K 7 HOH A 32 332 6 HOH HOH . 
K 7 HOH A 33 333 62 HOH HOH . 
K 7 HOH A 34 334 7 HOH HOH . 
K 7 HOH A 35 335 31 HOH HOH . 
K 7 HOH A 36 336 58 HOH HOH . 
K 7 HOH A 37 337 20 HOH HOH . 
K 7 HOH A 38 338 65 HOH HOH . 
K 7 HOH A 39 339 11 HOH HOH . 
K 7 HOH A 40 340 17 HOH HOH . 
K 7 HOH A 41 341 77 HOH HOH . 
K 7 HOH A 42 342 68 HOH HOH . 
K 7 HOH A 43 343 98 HOH HOH . 
K 7 HOH A 44 344 70 HOH HOH . 
K 7 HOH A 45 345 24 HOH HOH . 
K 7 HOH A 46 346 9 HOH HOH . 
K 7 HOH A 47 347 13 HOH HOH . 
K 7 HOH A 48 348 38 HOH HOH . 
K 7 HOH A 49 349 25 HOH HOH . 
K 7 HOH A 50 350 35 HOH HOH . 
K 7 HOH A 51 351 12 HOH HOH . 
K 7 HOH A 52 352 16 HOH HOH . 
K 7 HOH A 53 353 32 HOH HOH . 
K 7 HOH A 54 354 43 HOH HOH . 
K 7 HOH A 55 355 105 HOH HOH . 
K 7 HOH A 56 356 57 HOH HOH . 
K 7 HOH A 57 357 18 HOH HOH . 
K 7 HOH A 58 358 82 HOH HOH . 
K 7 HOH A 59 359 99 HOH HOH . 
K 7 HOH A 60 360 56 HOH HOH . 
K 7 HOH A 61 361 66 HOH HOH . 
K 7 HOH A 62 362 33 HOH HOH . 
K 7 HOH A 63 363 63 HOH HOH . 
K 7 HOH A 64 364 51 HOH HOH . 
K 7 HOH A 65 365 3 HOH HOH . 
K 7 HOH A 66 366 91 HOH HOH . 
K 7 HOH A 67 367 39 HOH HOH . 
K 7 HOH A 68 368 44 HOH HOH . 
K 7 HOH A 69 369 8 HOH HOH . 
K 7 HOH A 70 370 95 HOH HOH . 
K 7 HOH A 71 371 60 HOH HOH . 
K 7 HOH A 72 372 41 HOH HOH . 
K 7 HOH A 73 373 53 HOH HOH . 
K 7 HOH A 74 374 49 HOH HOH . 
K 7 HOH A 75 375 19 HOH HOH . 
K 7 HOH A 76 376 73 HOH HOH . 
K 7 HOH A 77 377 78 HOH HOH . 
K 7 HOH A 78 378 46 HOH HOH . 
K 7 HOH A 79 379 84 HOH HOH . 
K 7 HOH A 80 380 47 HOH HOH . 
K 7 HOH A 81 381 97 HOH HOH . 
K 7 HOH A 82 382 100 HOH HOH . 
K 7 HOH A 83 383 71 HOH HOH . 
K 7 HOH A 84 384 86 HOH HOH . 
K 7 HOH A 85 385 72 HOH HOH . 
K 7 HOH A 86 386 29 HOH HOH . 
K 7 HOH A 87 387 90 HOH HOH . 
K 7 HOH A 88 388 61 HOH HOH . 
K 7 HOH A 89 389 54 HOH HOH . 
K 7 HOH A 90 390 40 HOH HOH . 
K 7 HOH A 91 391 48 HOH HOH . 
K 7 HOH A 92 392 79 HOH HOH . 
K 7 HOH A 93 393 80 HOH HOH . 
K 7 HOH A 94 394 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 X4V . . . F 4 4.212 111.457 8.577 1 56.38 ? C1 X4V 205 A 1 
HETATM 2 C C2 X4V . . . F 4 3.028 110.124 6.87 1 56.03 ? C2 X4V 205 A 1 
HETATM 3 C C3 X4V . . . F 4 3.135 109.321 9.207 1 54.64 ? C3 X4V 205 A 1 
HETATM 4 C C4 X4V . . . F 4 2.451 108.13 8.881 1 52.89 ? C4 X4V 205 A 1 
HETATM 5 C C5 X4V . . . F 4 2.187 107.212 9.864 1 55.78 ? C5 X4V 205 A 1 
HETATM 6 C C6 X4V . . . F 4 3.217 108.532 11.481 1 55.85 ? C6 X4V 205 A 1 
HETATM 7 C C7 X4V . . . F 4 3.523 109.509 10.546 1 51.21 ? C7 X4V 205 A 1 
HETATM 8 N N1 X4V . . . F 4 3.441 110.27 8.255 1 55.03 ? N1 X4V 205 A 1 
HETATM 9 N N2 X4V . . . F 4 2.543 107.389 11.149 1 55.03 ? N2 X4V 205 A 1 
HETATM 10 N N3 X4V . . . F 4 3.583 108.687 12.765 1 53.72 ? N3 X4V 205 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           350 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#