data_7OSE
#
_model_server_result.job_id            PQ_4XYdNydTiFsbIFFHngg 
_model_server_result.datetime_utc      '2025-02-27 01:38:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7ose 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":401}' 
#
_entry.id    7OSE 
#
_exptl.entry_id    7OSE 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              727.109 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Ubiquinone-8 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OSE 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OSE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 K N N 
? 7 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 19 A HIS 19 1_555 I FE HDD . A HDD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.632 ? 
metalc ? metalc2 A NE2 HIS 186 A HIS 186 1_555 G FE HEB . A HEB 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? 
metalc ? metalc3 D NE2 HIS 19 D HIS 19 1_555 N FE HDD . D HDD 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.633 ? 
metalc ? metalc4 D NE2 HIS 186 D HIS 186 1_555 L FE HEB . D HEB 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
#
_chem_comp.formula           'C49 H74 O4' 
_chem_comp.formula_weight    727.109 
_chem_comp.id                UQ8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Ubiquinone-8 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2,3-dimethoxy-5-methyl-6-[(6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-oc taen-1-yl]cyclohexa-2,5-diene-1,4-dione' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C45 C44 UQ8 sing 587 n n 
C45 H45 UQ8 sing 588 n n 
C45 H45A UQ8 sing 589 n n 
C45 H45B UQ8 sing 590 n n 
C43 C44 UQ8 doub 591 n n 
C44 C46 UQ8 sing 592 n n 
C46 H46 UQ8 sing 593 n n 
C46 H46A UQ8 sing 594 n n 
C46 H46B UQ8 sing 595 n n 
C42 C43 UQ8 sing 596 n n 
C43 H43 UQ8 sing 597 n n 
C41 C42 UQ8 sing 598 n n 
C42 H42 UQ8 sing 599 n n 
C42 H42A UQ8 sing 600 n n 
C39 C41 UQ8 sing 601 n n 
C41 H41 UQ8 sing 602 n n 
C41 H41A UQ8 sing 603 n n 
C40 C39 UQ8 sing 604 n n 
C38 C39 UQ8 doub 605 n n 
C40 H40 UQ8 sing 606 n n 
C40 H40A UQ8 sing 607 n n 
C40 H40B UQ8 sing 608 e n 
C37 C38 UQ8 sing 609 n n 
C38 H38 UQ8 sing 610 n n 
C37 C36 UQ8 sing 611 n n 
C37 H37 UQ8 sing 612 n n 
C37 H37A UQ8 sing 613 n n 
C34 C36 UQ8 sing 614 n n 
C36 H36 UQ8 sing 615 n n 
C36 H36A UQ8 sing 616 n n 
C33 C34 UQ8 doub 617 n n 
C34 C35 UQ8 sing 618 n n 
C35 H35 UQ8 sing 619 n n 
C35 H35A UQ8 sing 620 n n 
C32 C33 UQ8 sing 621 e n 
C33 H33 UQ8 sing 622 n n 
C35 H35B UQ8 sing 623 n n 
C31 C32 UQ8 sing 624 n n 
C32 H32 UQ8 sing 625 n n 
C32 H32A UQ8 sing 626 n n 
C29 C31 UQ8 sing 627 n n 
C31 H31 UQ8 sing 628 n n 
C31 H31A UQ8 sing 629 n n 
C28 C29 UQ8 doub 630 n n 
C30 C29 UQ8 sing 631 n n 
C30 H30 UQ8 sing 632 n n 
C30 H30A UQ8 sing 633 n n 
C30 H30B UQ8 sing 634 e n 
C27 C28 UQ8 sing 635 n n 
C28 H28 UQ8 sing 636 n n 
C26 C27 UQ8 sing 637 n n 
C27 H27 UQ8 sing 638 n n 
C27 H27A UQ8 sing 639 n n 
C24 C26 UQ8 sing 640 n n 
C26 H26 UQ8 sing 641 n n 
C26 H26A UQ8 sing 642 n n 
C23 C24 UQ8 doub 643 n n 
C24 C25 UQ8 sing 644 n n 
C25 H25 UQ8 sing 645 n n 
C25 H25A UQ8 sing 646 n n 
C25 H25B UQ8 sing 647 e n 
C22 C23 UQ8 sing 648 n n 
C23 H23 UQ8 sing 649 n n 
C21 C22 UQ8 sing 650 n n 
C22 H22 UQ8 sing 651 n n 
C22 H22A UQ8 sing 652 n n 
C19 C21 UQ8 sing 653 n n 
C21 H21 UQ8 sing 654 n n 
C21 H21A UQ8 sing 655 n n 
C20 C19 UQ8 sing 656 n n 
C18 C19 UQ8 doub 657 n n 
C20 H20 UQ8 sing 658 n n 
C20 H20A UQ8 sing 659 n n 
C20 H20B UQ8 sing 660 e n 
C17 C18 UQ8 sing 661 n n 
C18 H18 UQ8 sing 662 n n 
C16 C17 UQ8 sing 663 n n 
C17 H17 UQ8 sing 664 n n 
C17 H17A UQ8 sing 665 n n 
C14 C16 UQ8 sing 666 n n 
C16 H16 UQ8 sing 667 n n 
C16 H16A UQ8 sing 668 n n 
C13 C14 UQ8 doub 669 n n 
C15 C14 UQ8 sing 670 n n 
C15 H15 UQ8 sing 671 n n 
C15 H15A UQ8 sing 672 n n 
C15 H15B UQ8 sing 673 e n 
C12 C13 UQ8 sing 674 n n 
C13 H13 UQ8 sing 675 n n 
C11 C12 UQ8 sing 676 n n 
C12 H12 UQ8 sing 677 n n 
C12 H12A UQ8 sing 678 n n 
C9 C11 UQ8 sing 679 n n 
C11 H11 UQ8 sing 680 n n 
C11 H11A UQ8 sing 681 n n 
C8 C9 UQ8 doub 682 n n 
C10 C9 UQ8 sing 683 n n 
C10 H10 UQ8 sing 684 n n 
C10 H10A UQ8 sing 685 n n 
C10 H10B UQ8 sing 686 e n 
C7 C8 UQ8 sing 687 n n 
C8 H8 UQ8 sing 688 n n 
C6 C7 UQ8 sing 689 n n 
C7 H7 UQ8 sing 690 n n 
C7 H7A UQ8 sing 691 n n 
C1 C6 UQ8 doub 692 n n 
C5 C6 UQ8 sing 693 n n 
C2 C1 UQ8 sing 694 n n 
C1 C1M UQ8 sing 695 n n 
C1M H1M UQ8 sing 696 n n 
C1M H1MA UQ8 sing 697 n n 
C1M H1MB UQ8 sing 698 n n 
O2 C2 UQ8 doub 699 n n 
C3 C2 UQ8 sing 700 n n 
O3 C3 UQ8 sing 701 n n 
C3 C4 UQ8 doub 702 n n 
C3M O3 UQ8 sing 703 n n 
C3M H3M UQ8 sing 704 n n 
C3M H3MA UQ8 sing 705 n n 
C3M H3MB UQ8 sing 706 n n 
O4 C4 UQ8 sing 707 n n 
C4 C5 UQ8 sing 708 n n 
C4M O4 UQ8 sing 709 n n 
C4M H4M UQ8 sing 710 n n 
C4M H4MA UQ8 sing 711 n n 
C4M H4MB UQ8 sing 712 n n 
C5 O5 UQ8 doub 713 n n 
#
_atom_sites.entry_id                     7OSE 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 HEB A 1 601 601 HEB HEB . 
H 4 HEB A 1 602 602 HEB HEB . 
I 5 HDD A 1 603 603 HDD HDD . 
J 6 0NI A 1 604 604 0NI 0NI . 
K 7 UQ8 B 1 401 702 UQ8 UQ8 . 
L 4 HEB D 1 601 601 HEB HEB . 
M 4 HEB D 1 602 602 HEB HEB . 
N 5 HDD D 1 603 603 HDD HDD . 
O 6 0NI D 1 604 604 0NI 0NI . 
P 7 UQ8 E 1 401 702 UQ8 UQ8 . 
Q 8 HOH A 1 701 701 HOH HOH . 
R 8 HOH D 1 701 701 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C45 UQ8 . . . P 7 117.503 146.851 95.733 1 107.47 ? C45 UQ8 401 E 1 
HETATM 2 C C44 UQ8 . . . P 7 117.837 148.087 96.512 1 107.47 ? C44 UQ8 401 E 1 
HETATM 3 C C46 UQ8 . . . P 7 116.688 149.028 96.714 1 107.47 ? C46 UQ8 401 E 1 
HETATM 4 C C43 UQ8 . . . P 7 119.046 148.322 96.996 1 107.47 ? C43 UQ8 401 E 1 
HETATM 5 C C42 UQ8 . . . P 7 120.265 147.455 96.897 1 107.47 ? C42 UQ8 401 E 1 
HETATM 6 C C41 UQ8 . . . P 7 121.218 147.915 95.779 1 107.47 ? C41 UQ8 401 E 1 
HETATM 7 C C39 UQ8 . . . P 7 120.778 147.514 94.392 1 107.47 ? C39 UQ8 401 E 1 
HETATM 8 C C40 UQ8 . . . P 7 120.076 148.585 93.606 1 107.47 ? C40 UQ8 401 E 1 
HETATM 9 C C38 UQ8 . . . P 7 121.018 146.295 93.922 1 107.47 ? C38 UQ8 401 E 1 
HETATM 10 C C37 UQ8 . . . P 7 121.706 145.158 94.617 1 107.47 ? C37 UQ8 401 E 1 
HETATM 11 C C36 UQ8 . . . P 7 123.235 145.244 94.47 1 107.47 ? C36 UQ8 401 E 1 
HETATM 12 C C34 UQ8 . . . P 7 123.941 144.112 95.176 1 107.47 ? C34 UQ8 401 E 1 
HETATM 13 C C35 UQ8 . . . P 7 123.274 143.622 96.429 1 107.47 ? C35 UQ8 401 E 1 
HETATM 14 C C33 UQ8 . . . P 7 125.068 143.605 94.696 1 107.47 ? C33 UQ8 401 E 1 
HETATM 15 C C32 UQ8 . . . P 7 125.888 142.483 95.263 1 107.47 ? C32 UQ8 401 E 1 
HETATM 16 C C31 UQ8 . . . P 7 127.31 142.938 95.642 1 107.47 ? C31 UQ8 401 E 1 
HETATM 17 C C29 UQ8 . . . P 7 127.435 143.485 97.044 1 107.47 ? C29 UQ8 401 E 1 
HETATM 18 C C30 UQ8 . . . P 7 128.551 142.901 97.861 1 107.47 ? C30 UQ8 401 E 1 
HETATM 19 C C28 UQ8 . . . P 7 126.602 144.415 97.494 1 107.47 ? C28 UQ8 401 E 1 
HETATM 20 C C27 UQ8 . . . P 7 126.582 145.059 98.848 1 107.47 ? C27 UQ8 401 E 1 
HETATM 21 C C26 UQ8 . . . P 7 125.831 144.194 99.875 1 107.47 ? C26 UQ8 401 E 1 
HETATM 22 C C24 UQ8 . . . P 7 125.369 144.995 101.067 1 107.47 ? C24 UQ8 401 E 1 
HETATM 23 C C25 UQ8 . . . P 7 125.221 144.22 102.345 1 107.47 ? C25 UQ8 401 E 1 
HETATM 24 C C23 UQ8 . . . P 7 125.097 146.289 100.954 1 107.47 ? C23 UQ8 401 E 1 
HETATM 25 C C22 UQ8 . . . P 7 124.579 147.218 102.012 1 107.47 ? C22 UQ8 401 E 1 
HETATM 26 C C21 UQ8 . . . P 7 125.197 148.624 101.89 1 107.47 ? C21 UQ8 401 E 1 
HETATM 27 C C19 UQ8 . . . P 7 126.478 148.805 102.668 1 107.47 ? C19 UQ8 401 E 1 
HETATM 28 C C20 UQ8 . . . P 7 126.756 147.754 103.704 1 107.47 ? C20 UQ8 401 E 1 
HETATM 29 C C18 UQ8 . . . P 7 127.278 149.839 102.441 1 107.47 ? C18 UQ8 401 E 1 
HETATM 30 C C17 UQ8 . . . P 7 127.109 150.941 101.438 1 107.47 ? C17 UQ8 401 E 1 
HETATM 31 C C16 UQ8 . . . P 7 126.757 152.282 102.107 1 107.47 ? C16 UQ8 401 E 1 
HETATM 32 C C14 UQ8 . . . P 7 125.268 152.497 102.225 1 107.47 ? C14 UQ8 401 E 1 
HETATM 33 C C15 UQ8 . . . P 7 124.601 151.778 103.361 1 107.47 ? C15 UQ8 401 E 1 
HETATM 34 C C13 UQ8 . . . P 7 124.622 153.266 101.36 1 107.47 ? C13 UQ8 401 E 1 
HETATM 35 C C12 UQ8 . . . P 7 125.192 154.039 100.209 1 107.47 ? C12 UQ8 401 E 1 
HETATM 36 C C11 UQ8 . . . P 7 125.634 155.438 100.673 1 107.47 ? C11 UQ8 401 E 1 
HETATM 37 C C9 UQ8 . . . P 7 125.911 156.393 99.54 1 107.47 ? C9 UQ8 401 E 1 
HETATM 38 C C10 UQ8 . . . P 7 126.771 155.847 98.436 1 107.47 ? C10 UQ8 401 E 1 
HETATM 39 C C8 UQ8 . . . P 7 125.421 157.625 99.553 1 107.47 ? C8 UQ8 401 E 1 
HETATM 40 C C7 UQ8 . . . P 7 125.631 158.684 98.506 1 107.47 ? C7 UQ8 401 E 1 
HETATM 41 C C6 UQ8 . . . P 7 124.357 159.407 98.147 1 107.47 ? C6 UQ8 401 E 1 
HETATM 42 C C1 UQ8 . . . P 7 123.481 158.958 97.208 1 107.47 ? C1 UQ8 401 E 1 
HETATM 43 C C1M UQ8 . . . P 7 123.655 157.669 96.462 1 107.47 ? C1M UQ8 401 E 1 
HETATM 44 C C2 UQ8 . . . P 7 122.308 159.779 96.844 1 107.47 ? C2 UQ8 401 E 1 
HETATM 45 O O2 UQ8 . . . P 7 121.514 159.391 95.99 1 107.47 ? O2 UQ8 401 E 1 
HETATM 46 C C3 UQ8 . . . P 7 122.099 161.074 97.519 1 107.47 ? C3 UQ8 401 E 1 
HETATM 47 O O3 UQ8 . . . P 7 121.023 161.79 97.089 1 107.47 ? O3 UQ8 401 E 1 
HETATM 48 C C3M UQ8 . . . P 7 121.289 162.99 96.325 1 107.47 ? C3M UQ8 401 E 1 
HETATM 49 C C4 UQ8 . . . P 7 122.935 161.48 98.493 1 107.47 ? C4 UQ8 401 E 1 
HETATM 50 O O4 UQ8 . . . P 7 122.822 162.666 99.156 1 107.47 ? O4 UQ8 401 E 1 
HETATM 51 C C4M UQ8 . . . P 7 121.69 162.848 100.039 1 107.47 ? C4M UQ8 401 E 1 
HETATM 52 C C5 UQ8 . . . P 7 124.088 160.65 98.886 1 107.47 ? C5 UQ8 401 E 1 
HETATM 53 O O5 UQ8 . . . P 7 124.797 160.985 99.831 1 107.47 ? O5 UQ8 401 E 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#