data_7OSP
#
_model_server_result.job_id            lnlRlafJqtq3dbB1pFelLg 
_model_server_result.datetime_utc      '2024-11-22 08:47:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7osp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    7OSP 
#
_exptl.entry_id    7OSP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7OSP 
_cell.length_a            45.31 
_cell.length_b            68.55 
_cell.length_c            159.63 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7OSP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 277 n n 
C1 H11 MPD sing 278 n n 
C1 H12 MPD sing 279 n n 
C1 H13 MPD sing 280 n n 
C2 O2 MPD sing 281 n n 
C2 CM MPD sing 282 n n 
C2 C3 MPD sing 283 n n 
O2 HO2 MPD sing 284 n n 
CM HM1 MPD sing 285 n n 
CM HM2 MPD sing 286 n n 
CM HM3 MPD sing 287 n n 
C3 C4 MPD sing 288 n n 
C3 H31 MPD sing 289 n n 
C3 H32 MPD sing 290 n n 
C4 O4 MPD sing 291 n n 
C4 C5 MPD sing 292 n n 
C4 H4 MPD sing 293 n n 
O4 HO4 MPD sing 294 n n 
C5 H51 MPD sing 295 n n 
C5 H52 MPD sing 296 n n 
C5 H53 MPD sing 297 n n 
#
_atom_sites.entry_id                     7OSP 
_atom_sites.fract_transf_matrix[1][1]    0.02207 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014588 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006264 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0Q6 A 1 701 1 0Q6 DRG . 
D 3 MPD A 1 702 1 MPD MPD . 
E 4 DMS B 1 701 1 DMS DMS . 
F 5 HOH A 1 801 139 HOH HOH . 
F 5 HOH A 2 802 109 HOH HOH . 
F 5 HOH A 3 803 143 HOH HOH . 
F 5 HOH A 4 804 34 HOH HOH . 
F 5 HOH A 5 805 68 HOH HOH . 
F 5 HOH A 6 806 189 HOH HOH . 
F 5 HOH A 7 807 119 HOH HOH . 
F 5 HOH A 8 808 202 HOH HOH . 
F 5 HOH A 9 809 62 HOH HOH . 
F 5 HOH A 10 810 169 HOH HOH . 
F 5 HOH A 11 811 186 HOH HOH . 
F 5 HOH A 12 812 58 HOH HOH . 
F 5 HOH A 13 813 238 HOH HOH . 
F 5 HOH A 14 814 232 HOH HOH . 
F 5 HOH A 15 815 55 HOH HOH . 
F 5 HOH A 16 816 204 HOH HOH . 
F 5 HOH A 17 817 42 HOH HOH . 
F 5 HOH A 18 818 133 HOH HOH . 
F 5 HOH A 19 819 244 HOH HOH . 
F 5 HOH A 20 820 50 HOH HOH . 
F 5 HOH A 21 821 123 HOH HOH . 
F 5 HOH A 22 822 224 HOH HOH . 
F 5 HOH A 23 823 182 HOH HOH . 
F 5 HOH A 24 824 26 HOH HOH . 
F 5 HOH A 25 825 16 HOH HOH . 
F 5 HOH A 26 826 102 HOH HOH . 
F 5 HOH A 27 827 122 HOH HOH . 
F 5 HOH A 28 828 149 HOH HOH . 
F 5 HOH A 29 829 121 HOH HOH . 
F 5 HOH A 30 830 83 HOH HOH . 
F 5 HOH A 31 831 99 HOH HOH . 
F 5 HOH A 32 832 158 HOH HOH . 
F 5 HOH A 33 833 178 HOH HOH . 
F 5 HOH A 34 834 153 HOH HOH . 
F 5 HOH A 35 835 229 HOH HOH . 
F 5 HOH A 36 836 251 HOH HOH . 
F 5 HOH A 37 837 90 HOH HOH . 
F 5 HOH A 38 838 36 HOH HOH . 
F 5 HOH A 39 839 110 HOH HOH . 
F 5 HOH A 40 840 77 HOH HOH . 
F 5 HOH A 41 841 142 HOH HOH . 
F 5 HOH A 42 842 200 HOH HOH . 
F 5 HOH A 43 843 242 HOH HOH . 
F 5 HOH A 44 844 130 HOH HOH . 
F 5 HOH A 45 845 84 HOH HOH . 
F 5 HOH A 46 846 14 HOH HOH . 
F 5 HOH A 47 847 111 HOH HOH . 
F 5 HOH A 48 848 114 HOH HOH . 
F 5 HOH A 49 849 138 HOH HOH . 
F 5 HOH A 50 850 117 HOH HOH . 
F 5 HOH A 51 851 185 HOH HOH . 
F 5 HOH A 52 852 91 HOH HOH . 
F 5 HOH A 53 853 241 HOH HOH . 
F 5 HOH A 54 854 59 HOH HOH . 
F 5 HOH A 55 855 166 HOH HOH . 
F 5 HOH A 56 856 82 HOH HOH . 
F 5 HOH A 57 857 29 HOH HOH . 
F 5 HOH A 58 858 115 HOH HOH . 
F 5 HOH A 59 859 24 HOH HOH . 
F 5 HOH A 60 860 184 HOH HOH . 
F 5 HOH A 61 861 49 HOH HOH . 
F 5 HOH A 62 862 240 HOH HOH . 
F 5 HOH A 63 863 93 HOH HOH . 
F 5 HOH A 64 864 73 HOH HOH . 
F 5 HOH A 65 865 205 HOH HOH . 
F 5 HOH A 66 866 96 HOH HOH . 
F 5 HOH A 67 867 80 HOH HOH . 
F 5 HOH A 68 868 46 HOH HOH . 
F 5 HOH A 69 869 100 HOH HOH . 
F 5 HOH A 70 870 222 HOH HOH . 
F 5 HOH A 71 871 209 HOH HOH . 
F 5 HOH A 72 872 113 HOH HOH . 
F 5 HOH A 73 873 237 HOH HOH . 
F 5 HOH A 74 874 173 HOH HOH . 
F 5 HOH A 75 875 177 HOH HOH . 
F 5 HOH A 76 876 125 HOH HOH . 
F 5 HOH A 77 877 217 HOH HOH . 
F 5 HOH A 78 878 87 HOH HOH . 
F 5 HOH A 79 879 53 HOH HOH . 
F 5 HOH A 80 880 170 HOH HOH . 
F 5 HOH A 81 881 25 HOH HOH . 
F 5 HOH A 82 882 56 HOH HOH . 
F 5 HOH A 83 883 226 HOH HOH . 
F 5 HOH A 84 884 162 HOH HOH . 
F 5 HOH A 85 885 249 HOH HOH . 
F 5 HOH A 86 886 51 HOH HOH . 
F 5 HOH A 87 887 214 HOH HOH . 
F 5 HOH A 88 888 39 HOH HOH . 
F 5 HOH A 89 889 78 HOH HOH . 
F 5 HOH A 90 890 8 HOH HOH . 
F 5 HOH A 91 891 72 HOH HOH . 
F 5 HOH A 92 892 245 HOH HOH . 
F 5 HOH A 93 893 2 HOH HOH . 
F 5 HOH A 94 894 116 HOH HOH . 
F 5 HOH A 95 895 168 HOH HOH . 
F 5 HOH A 96 896 105 HOH HOH . 
F 5 HOH A 97 897 207 HOH HOH . 
F 5 HOH A 98 898 160 HOH HOH . 
F 5 HOH A 99 899 239 HOH HOH . 
F 5 HOH A 100 900 164 HOH HOH . 
F 5 HOH A 101 901 193 HOH HOH . 
F 5 HOH A 102 902 188 HOH HOH . 
F 5 HOH A 103 903 201 HOH HOH . 
F 5 HOH A 104 904 187 HOH HOH . 
G 5 HOH B 1 801 243 HOH HOH . 
G 5 HOH B 2 802 231 HOH HOH . 
G 5 HOH B 3 803 246 HOH HOH . 
G 5 HOH B 4 804 155 HOH HOH . 
G 5 HOH B 5 805 137 HOH HOH . 
G 5 HOH B 6 806 174 HOH HOH . 
G 5 HOH B 7 807 63 HOH HOH . 
G 5 HOH B 8 808 191 HOH HOH . 
G 5 HOH B 9 809 250 HOH HOH . 
G 5 HOH B 10 810 199 HOH HOH . 
G 5 HOH B 11 811 190 HOH HOH . 
G 5 HOH B 12 812 66 HOH HOH . 
G 5 HOH B 13 813 132 HOH HOH . 
G 5 HOH B 14 814 235 HOH HOH . 
G 5 HOH B 15 815 228 HOH HOH . 
G 5 HOH B 16 816 215 HOH HOH . 
G 5 HOH B 17 817 203 HOH HOH . 
G 5 HOH B 18 818 216 HOH HOH . 
G 5 HOH B 19 819 167 HOH HOH . 
G 5 HOH B 20 820 247 HOH HOH . 
G 5 HOH B 21 821 41 HOH HOH . 
G 5 HOH B 22 822 223 HOH HOH . 
G 5 HOH B 23 823 213 HOH HOH . 
G 5 HOH B 24 824 11 HOH HOH . 
G 5 HOH B 25 825 23 HOH HOH . 
G 5 HOH B 26 826 101 HOH HOH . 
G 5 HOH B 27 827 10 HOH HOH . 
G 5 HOH B 28 828 85 HOH HOH . 
G 5 HOH B 29 829 21 HOH HOH . 
G 5 HOH B 30 830 45 HOH HOH . 
G 5 HOH B 31 831 31 HOH HOH . 
G 5 HOH B 32 832 236 HOH HOH . 
G 5 HOH B 33 833 219 HOH HOH . 
G 5 HOH B 34 834 195 HOH HOH . 
G 5 HOH B 35 835 230 HOH HOH . 
G 5 HOH B 36 836 13 HOH HOH . 
G 5 HOH B 37 837 140 HOH HOH . 
G 5 HOH B 38 838 64 HOH HOH . 
G 5 HOH B 39 839 7 HOH HOH . 
G 5 HOH B 40 840 40 HOH HOH . 
G 5 HOH B 41 841 69 HOH HOH . 
G 5 HOH B 42 842 4 HOH HOH . 
G 5 HOH B 43 843 171 HOH HOH . 
G 5 HOH B 44 844 233 HOH HOH . 
G 5 HOH B 45 845 106 HOH HOH . 
G 5 HOH B 46 846 81 HOH HOH . 
G 5 HOH B 47 847 12 HOH HOH . 
G 5 HOH B 48 848 18 HOH HOH . 
G 5 HOH B 49 849 206 HOH HOH . 
G 5 HOH B 50 850 88 HOH HOH . 
G 5 HOH B 51 851 103 HOH HOH . 
G 5 HOH B 52 852 5 HOH HOH . 
G 5 HOH B 53 853 76 HOH HOH . 
G 5 HOH B 54 854 6 HOH HOH . 
G 5 HOH B 55 855 48 HOH HOH . 
G 5 HOH B 56 856 221 HOH HOH . 
G 5 HOH B 57 857 157 HOH HOH . 
G 5 HOH B 58 858 94 HOH HOH . 
G 5 HOH B 59 859 198 HOH HOH . 
G 5 HOH B 60 860 43 HOH HOH . 
G 5 HOH B 61 861 75 HOH HOH . 
G 5 HOH B 62 862 152 HOH HOH . 
G 5 HOH B 63 863 118 HOH HOH . 
G 5 HOH B 64 864 22 HOH HOH . 
G 5 HOH B 65 865 148 HOH HOH . 
G 5 HOH B 66 866 27 HOH HOH . 
G 5 HOH B 67 867 92 HOH HOH . 
G 5 HOH B 68 868 60 HOH HOH . 
G 5 HOH B 69 869 151 HOH HOH . 
G 5 HOH B 70 870 47 HOH HOH . 
G 5 HOH B 71 871 126 HOH HOH . 
G 5 HOH B 72 872 57 HOH HOH . 
G 5 HOH B 73 873 97 HOH HOH . 
G 5 HOH B 74 874 17 HOH HOH . 
G 5 HOH B 75 875 141 HOH HOH . 
G 5 HOH B 76 876 210 HOH HOH . 
G 5 HOH B 77 877 147 HOH HOH . 
G 5 HOH B 78 878 107 HOH HOH . 
G 5 HOH B 79 879 156 HOH HOH . 
G 5 HOH B 80 880 176 HOH HOH . 
G 5 HOH B 81 881 112 HOH HOH . 
G 5 HOH B 82 882 212 HOH HOH . 
G 5 HOH B 83 883 67 HOH HOH . 
G 5 HOH B 84 884 124 HOH HOH . 
G 5 HOH B 85 885 127 HOH HOH . 
G 5 HOH B 86 886 95 HOH HOH . 
G 5 HOH B 87 887 145 HOH HOH . 
G 5 HOH B 88 888 252 HOH HOH . 
G 5 HOH B 89 889 227 HOH HOH . 
G 5 HOH B 90 890 71 HOH HOH . 
G 5 HOH B 91 891 165 HOH HOH . 
G 5 HOH B 92 892 15 HOH HOH . 
G 5 HOH B 93 893 120 HOH HOH . 
G 5 HOH B 94 894 175 HOH HOH . 
G 5 HOH B 95 895 74 HOH HOH . 
G 5 HOH B 96 896 154 HOH HOH . 
G 5 HOH B 97 897 19 HOH HOH . 
G 5 HOH B 98 898 234 HOH HOH . 
G 5 HOH B 99 899 28 HOH HOH . 
G 5 HOH B 100 900 37 HOH HOH . 
G 5 HOH B 101 901 146 HOH HOH . 
G 5 HOH B 102 902 65 HOH HOH . 
G 5 HOH B 103 903 44 HOH HOH . 
G 5 HOH B 104 904 128 HOH HOH . 
G 5 HOH B 105 905 144 HOH HOH . 
G 5 HOH B 106 906 54 HOH HOH . 
G 5 HOH B 107 907 86 HOH HOH . 
G 5 HOH B 108 908 52 HOH HOH . 
G 5 HOH B 109 909 38 HOH HOH . 
G 5 HOH B 110 910 194 HOH HOH . 
G 5 HOH B 111 911 159 HOH HOH . 
G 5 HOH B 112 912 129 HOH HOH . 
G 5 HOH B 113 913 192 HOH HOH . 
G 5 HOH B 114 914 98 HOH HOH . 
G 5 HOH B 115 915 196 HOH HOH . 
G 5 HOH B 116 916 70 HOH HOH . 
G 5 HOH B 117 917 3 HOH HOH . 
G 5 HOH B 118 918 20 HOH HOH . 
G 5 HOH B 119 919 32 HOH HOH . 
G 5 HOH B 120 920 79 HOH HOH . 
G 5 HOH B 121 921 134 HOH HOH . 
G 5 HOH B 122 922 89 HOH HOH . 
G 5 HOH B 123 923 33 HOH HOH . 
G 5 HOH B 124 924 220 HOH HOH . 
G 5 HOH B 125 925 135 HOH HOH . 
G 5 HOH B 126 926 150 HOH HOH . 
G 5 HOH B 127 927 35 HOH HOH . 
G 5 HOH B 128 928 30 HOH HOH . 
G 5 HOH B 129 929 9 HOH HOH . 
G 5 HOH B 130 930 1 HOH HOH . 
G 5 HOH B 131 931 180 HOH HOH . 
G 5 HOH B 132 932 197 HOH HOH . 
G 5 HOH B 133 933 131 HOH HOH . 
G 5 HOH B 134 934 225 HOH HOH . 
G 5 HOH B 135 935 163 HOH HOH . 
G 5 HOH B 136 936 181 HOH HOH . 
G 5 HOH B 137 937 108 HOH HOH . 
G 5 HOH B 138 938 211 HOH HOH . 
G 5 HOH B 139 939 208 HOH HOH . 
G 5 HOH B 140 940 104 HOH HOH . 
G 5 HOH B 141 941 218 HOH HOH . 
G 5 HOH B 142 942 172 HOH HOH . 
G 5 HOH B 143 943 248 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . D 3 51.419 19.565 18.202 1 38.52 ? C1 MPD 702 A 1 
HETATM 2 C C2 MPD . . . D 3 50.144 18.905 18.713 1 33.36 ? C2 MPD 702 A 1 
HETATM 3 O O2 MPD . . . D 3 49.514 18.339 17.533 1 31.45 ? O2 MPD 702 A 1 
HETATM 4 C CM MPD . . . D 3 50.485 17.776 19.679 1 37.58 ? CM MPD 702 A 1 
HETATM 5 C C3 MPD . . . D 3 49.178 19.915 19.36 1 36.24 ? C3 MPD 702 A 1 
HETATM 6 C C4 MPD . . . D 3 49.784 20.847 20.448 1 32.74 ? C4 MPD 702 A 1 
HETATM 7 O O4 MPD . . . D 3 50.256 22.099 19.89 1 31.15 ? O4 MPD 702 A 1 
HETATM 8 C C5 MPD . . . D 3 48.876 21.197 21.607 1 32.8 ? C5 MPD 702 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           258 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#