data_7OTF # _model_server_result.job_id sp-Shj4PeJyxhQxqZ1d2AA _model_server_result.datetime_utc '2024-11-22 04:02:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7otf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 7OTF # _exptl.entry_id 7OTF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OTF _cell.length_a 45.31 _cell.length_b 68.63 _cell.length_c 158.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OTF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 121 n n S C1 DMS sing 122 n n S C2 DMS sing 123 n n C1 H11 DMS sing 124 n n C1 H12 DMS sing 125 n n C1 H13 DMS sing 126 n n C2 H21 DMS sing 127 n n C2 H22 DMS sing 128 n n C2 H23 DMS sing 129 n n # _atom_sites.entry_id 7OTF _atom_sites.fract_transf_matrix[1][1] 0.02207 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006303 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1H9 A 1 701 723 1H9 DRG . D 3 DMS A 1 702 724 DMS DMS . E 4 HOH A 1 801 297 HOH HOH . E 4 HOH A 2 802 147 HOH HOH . E 4 HOH A 3 803 292 HOH HOH . E 4 HOH A 4 804 303 HOH HOH . E 4 HOH A 5 805 124 HOH HOH . E 4 HOH A 6 806 210 HOH HOH . E 4 HOH A 7 807 341 HOH HOH . E 4 HOH A 8 808 72 HOH HOH . E 4 HOH A 9 809 293 HOH HOH . E 4 HOH A 10 810 62 HOH HOH . E 4 HOH A 11 811 123 HOH HOH . E 4 HOH A 12 812 242 HOH HOH . E 4 HOH A 13 813 116 HOH HOH . E 4 HOH A 14 814 301 HOH HOH . E 4 HOH A 15 815 278 HOH HOH . E 4 HOH A 16 816 77 HOH HOH . E 4 HOH A 17 817 309 HOH HOH . E 4 HOH A 18 818 83 HOH HOH . E 4 HOH A 19 819 135 HOH HOH . E 4 HOH A 20 820 99 HOH HOH . E 4 HOH A 21 821 240 HOH HOH . E 4 HOH A 22 822 307 HOH HOH . E 4 HOH A 23 823 280 HOH HOH . E 4 HOH A 24 824 268 HOH HOH . E 4 HOH A 25 825 144 HOH HOH . E 4 HOH A 26 826 246 HOH HOH . E 4 HOH A 27 827 100 HOH HOH . E 4 HOH A 28 828 101 HOH HOH . E 4 HOH A 29 829 187 HOH HOH . E 4 HOH A 30 830 267 HOH HOH . E 4 HOH A 31 831 133 HOH HOH . E 4 HOH A 32 832 345 HOH HOH . E 4 HOH A 33 833 216 HOH HOH . E 4 HOH A 34 834 34 HOH HOH . E 4 HOH A 35 835 202 HOH HOH . E 4 HOH A 36 836 206 HOH HOH . E 4 HOH A 37 837 14 HOH HOH . E 4 HOH A 38 838 8 HOH HOH . E 4 HOH A 39 839 31 HOH HOH . E 4 HOH A 40 840 235 HOH HOH . E 4 HOH A 41 841 339 HOH HOH . E 4 HOH A 42 842 106 HOH HOH . E 4 HOH A 43 843 20 HOH HOH . E 4 HOH A 44 844 140 HOH HOH . E 4 HOH A 45 845 126 HOH HOH . E 4 HOH A 46 846 287 HOH HOH . E 4 HOH A 47 847 89 HOH HOH . E 4 HOH A 48 848 243 HOH HOH . E 4 HOH A 49 849 5 HOH HOH . E 4 HOH A 50 850 98 HOH HOH . E 4 HOH A 51 851 80 HOH HOH . E 4 HOH A 52 852 163 HOH HOH . E 4 HOH A 53 853 96 HOH HOH . E 4 HOH A 54 854 40 HOH HOH . E 4 HOH A 55 855 91 HOH HOH . E 4 HOH A 56 856 76 HOH HOH . E 4 HOH A 57 857 68 HOH HOH . E 4 HOH A 58 858 86 HOH HOH . E 4 HOH A 59 859 245 HOH HOH . E 4 HOH A 60 860 199 HOH HOH . E 4 HOH A 61 861 69 HOH HOH . E 4 HOH A 62 862 276 HOH HOH . E 4 HOH A 63 863 296 HOH HOH . E 4 HOH A 64 864 87 HOH HOH . E 4 HOH A 65 865 44 HOH HOH . E 4 HOH A 66 866 115 HOH HOH . E 4 HOH A 67 867 237 HOH HOH . E 4 HOH A 68 868 277 HOH HOH . E 4 HOH A 69 869 58 HOH HOH . E 4 HOH A 70 870 30 HOH HOH . E 4 HOH A 71 871 248 HOH HOH . E 4 HOH A 72 872 311 HOH HOH . E 4 HOH A 73 873 6 HOH HOH . E 4 HOH A 74 874 84 HOH HOH . E 4 HOH A 75 875 13 HOH HOH . E 4 HOH A 76 876 66 HOH HOH . E 4 HOH A 77 877 186 HOH HOH . E 4 HOH A 78 878 198 HOH HOH . E 4 HOH A 79 879 332 HOH HOH . E 4 HOH A 80 880 73 HOH HOH . E 4 HOH A 81 881 129 HOH HOH . E 4 HOH A 82 882 88 HOH HOH . E 4 HOH A 83 883 170 HOH HOH . E 4 HOH A 84 884 330 HOH HOH . E 4 HOH A 85 885 192 HOH HOH . E 4 HOH A 86 886 335 HOH HOH . E 4 HOH A 87 887 321 HOH HOH . E 4 HOH A 88 888 294 HOH HOH . E 4 HOH A 89 889 220 HOH HOH . E 4 HOH A 90 890 173 HOH HOH . E 4 HOH A 91 891 25 HOH HOH . E 4 HOH A 92 892 79 HOH HOH . E 4 HOH A 93 893 102 HOH HOH . E 4 HOH A 94 894 231 HOH HOH . E 4 HOH A 95 895 247 HOH HOH . E 4 HOH A 96 896 21 HOH HOH . E 4 HOH A 97 897 338 HOH HOH . E 4 HOH A 98 898 156 HOH HOH . E 4 HOH A 99 899 52 HOH HOH . E 4 HOH A 100 900 85 HOH HOH . E 4 HOH A 101 901 127 HOH HOH . E 4 HOH A 102 902 342 HOH HOH . E 4 HOH A 103 903 306 HOH HOH . E 4 HOH A 104 904 201 HOH HOH . E 4 HOH A 105 905 334 HOH HOH . E 4 HOH A 106 906 48 HOH HOH . E 4 HOH A 107 907 39 HOH HOH . E 4 HOH A 108 908 33 HOH HOH . E 4 HOH A 109 909 226 HOH HOH . E 4 HOH A 110 910 168 HOH HOH . E 4 HOH A 111 911 282 HOH HOH . E 4 HOH A 112 912 221 HOH HOH . E 4 HOH A 113 913 57 HOH HOH . E 4 HOH A 114 914 11 HOH HOH . E 4 HOH A 115 915 82 HOH HOH . E 4 HOH A 116 916 110 HOH HOH . E 4 HOH A 117 917 128 HOH HOH . E 4 HOH A 118 918 259 HOH HOH . E 4 HOH A 119 919 103 HOH HOH . E 4 HOH A 120 920 49 HOH HOH . E 4 HOH A 121 921 22 HOH HOH . E 4 HOH A 122 922 117 HOH HOH . E 4 HOH A 123 923 54 HOH HOH . E 4 HOH A 124 924 176 HOH HOH . E 4 HOH A 125 925 305 HOH HOH . E 4 HOH A 126 926 139 HOH HOH . E 4 HOH A 127 927 325 HOH HOH . E 4 HOH A 128 928 254 HOH HOH . E 4 HOH A 129 929 251 HOH HOH . E 4 HOH A 130 930 315 HOH HOH . E 4 HOH A 131 931 255 HOH HOH . E 4 HOH A 132 932 271 HOH HOH . E 4 HOH A 133 933 174 HOH HOH . E 4 HOH A 134 934 328 HOH HOH . E 4 HOH A 135 935 283 HOH HOH . E 4 HOH A 136 936 336 HOH HOH . E 4 HOH A 137 937 319 HOH HOH . E 4 HOH A 138 938 310 HOH HOH . E 4 HOH A 139 939 269 HOH HOH . E 4 HOH A 140 940 286 HOH HOH . E 4 HOH A 141 941 274 HOH HOH . E 4 HOH A 142 942 238 HOH HOH . E 4 HOH A 143 943 252 HOH HOH . E 4 HOH A 144 944 263 HOH HOH . E 4 HOH A 145 945 343 HOH HOH . F 4 HOH B 1 701 322 HOH HOH . F 4 HOH B 2 702 317 HOH HOH . F 4 HOH B 3 703 223 HOH HOH . F 4 HOH B 4 704 299 HOH HOH . F 4 HOH B 5 705 161 HOH HOH . F 4 HOH B 6 706 213 HOH HOH . F 4 HOH B 7 707 331 HOH HOH . F 4 HOH B 8 708 109 HOH HOH . F 4 HOH B 9 709 61 HOH HOH . F 4 HOH B 10 710 204 HOH HOH . F 4 HOH B 11 711 183 HOH HOH . F 4 HOH B 12 712 234 HOH HOH . F 4 HOH B 13 713 184 HOH HOH . F 4 HOH B 14 714 114 HOH HOH . F 4 HOH B 15 715 136 HOH HOH . F 4 HOH B 16 716 312 HOH HOH . F 4 HOH B 17 717 108 HOH HOH . F 4 HOH B 18 718 264 HOH HOH . F 4 HOH B 19 719 295 HOH HOH . F 4 HOH B 20 720 92 HOH HOH . F 4 HOH B 21 721 288 HOH HOH . F 4 HOH B 22 722 138 HOH HOH . F 4 HOH B 23 723 93 HOH HOH . F 4 HOH B 24 724 142 HOH HOH . F 4 HOH B 25 725 209 HOH HOH . F 4 HOH B 26 726 266 HOH HOH . F 4 HOH B 27 727 7 HOH HOH . F 4 HOH B 28 728 78 HOH HOH . F 4 HOH B 29 729 111 HOH HOH . F 4 HOH B 30 730 166 HOH HOH . F 4 HOH B 31 731 148 HOH HOH . F 4 HOH B 32 732 215 HOH HOH . F 4 HOH B 33 733 185 HOH HOH . F 4 HOH B 34 734 32 HOH HOH . F 4 HOH B 35 735 153 HOH HOH . F 4 HOH B 36 736 167 HOH HOH . F 4 HOH B 37 737 137 HOH HOH . F 4 HOH B 38 738 229 HOH HOH . F 4 HOH B 39 739 19 HOH HOH . F 4 HOH B 40 740 26 HOH HOH . F 4 HOH B 41 741 28 HOH HOH . F 4 HOH B 42 742 200 HOH HOH . F 4 HOH B 43 743 159 HOH HOH . F 4 HOH B 44 744 65 HOH HOH . F 4 HOH B 45 745 27 HOH HOH . F 4 HOH B 46 746 107 HOH HOH . F 4 HOH B 47 747 265 HOH HOH . F 4 HOH B 48 748 112 HOH HOH . F 4 HOH B 49 749 285 HOH HOH . F 4 HOH B 50 750 228 HOH HOH . F 4 HOH B 51 751 194 HOH HOH . F 4 HOH B 52 752 120 HOH HOH . F 4 HOH B 53 753 29 HOH HOH . F 4 HOH B 54 754 56 HOH HOH . F 4 HOH B 55 755 18 HOH HOH . F 4 HOH B 56 756 171 HOH HOH . F 4 HOH B 57 757 190 HOH HOH . F 4 HOH B 58 758 41 HOH HOH . F 4 HOH B 59 759 327 HOH HOH . F 4 HOH B 60 760 46 HOH HOH . F 4 HOH B 61 761 95 HOH HOH . F 4 HOH B 62 762 197 HOH HOH . F 4 HOH B 63 763 71 HOH HOH . F 4 HOH B 64 764 239 HOH HOH . F 4 HOH B 65 765 272 HOH HOH . F 4 HOH B 66 766 143 HOH HOH . F 4 HOH B 67 767 203 HOH HOH . F 4 HOH B 68 768 12 HOH HOH . F 4 HOH B 69 769 218 HOH HOH . F 4 HOH B 70 770 130 HOH HOH . F 4 HOH B 71 771 43 HOH HOH . F 4 HOH B 72 772 122 HOH HOH . F 4 HOH B 73 773 3 HOH HOH . F 4 HOH B 74 774 10 HOH HOH . F 4 HOH B 75 775 157 HOH HOH . F 4 HOH B 76 776 97 HOH HOH . F 4 HOH B 77 777 211 HOH HOH . F 4 HOH B 78 778 279 HOH HOH . F 4 HOH B 79 779 164 HOH HOH . F 4 HOH B 80 780 291 HOH HOH . F 4 HOH B 81 781 42 HOH HOH . F 4 HOH B 82 782 75 HOH HOH . F 4 HOH B 83 783 51 HOH HOH . F 4 HOH B 84 784 241 HOH HOH . F 4 HOH B 85 785 131 HOH HOH . F 4 HOH B 86 786 113 HOH HOH . F 4 HOH B 87 787 275 HOH HOH . F 4 HOH B 88 788 15 HOH HOH . F 4 HOH B 89 789 191 HOH HOH . F 4 HOH B 90 790 214 HOH HOH . F 4 HOH B 91 791 67 HOH HOH . F 4 HOH B 92 792 47 HOH HOH . F 4 HOH B 93 793 16 HOH HOH . F 4 HOH B 94 794 158 HOH HOH . F 4 HOH B 95 795 314 HOH HOH . F 4 HOH B 96 796 169 HOH HOH . F 4 HOH B 97 797 244 HOH HOH . F 4 HOH B 98 798 257 HOH HOH . F 4 HOH B 99 799 232 HOH HOH . F 4 HOH B 100 800 222 HOH HOH . F 4 HOH B 101 801 225 HOH HOH . F 4 HOH B 102 802 63 HOH HOH . F 4 HOH B 103 803 81 HOH HOH . F 4 HOH B 104 804 212 HOH HOH . F 4 HOH B 105 805 152 HOH HOH . F 4 HOH B 106 806 219 HOH HOH . F 4 HOH B 107 807 50 HOH HOH . F 4 HOH B 108 808 90 HOH HOH . F 4 HOH B 109 809 162 HOH HOH . F 4 HOH B 110 810 53 HOH HOH . F 4 HOH B 111 811 324 HOH HOH . F 4 HOH B 112 812 262 HOH HOH . F 4 HOH B 113 813 150 HOH HOH . F 4 HOH B 114 814 118 HOH HOH . F 4 HOH B 115 815 179 HOH HOH . F 4 HOH B 116 816 260 HOH HOH . F 4 HOH B 117 817 196 HOH HOH . F 4 HOH B 118 818 36 HOH HOH . F 4 HOH B 119 819 224 HOH HOH . F 4 HOH B 120 820 105 HOH HOH . F 4 HOH B 121 821 74 HOH HOH . F 4 HOH B 122 822 145 HOH HOH . F 4 HOH B 123 823 149 HOH HOH . F 4 HOH B 124 824 45 HOH HOH . F 4 HOH B 125 825 119 HOH HOH . F 4 HOH B 126 826 160 HOH HOH . F 4 HOH B 127 827 70 HOH HOH . F 4 HOH B 128 828 337 HOH HOH . F 4 HOH B 129 829 193 HOH HOH . F 4 HOH B 130 830 35 HOH HOH . F 4 HOH B 131 831 64 HOH HOH . F 4 HOH B 132 832 24 HOH HOH . F 4 HOH B 133 833 134 HOH HOH . F 4 HOH B 134 834 256 HOH HOH . F 4 HOH B 135 835 55 HOH HOH . F 4 HOH B 136 836 230 HOH HOH . F 4 HOH B 137 837 94 HOH HOH . F 4 HOH B 138 838 261 HOH HOH . F 4 HOH B 139 839 281 HOH HOH . F 4 HOH B 140 840 146 HOH HOH . F 4 HOH B 141 841 59 HOH HOH . F 4 HOH B 142 842 195 HOH HOH . F 4 HOH B 143 843 60 HOH HOH . F 4 HOH B 144 844 308 HOH HOH . F 4 HOH B 145 845 304 HOH HOH . F 4 HOH B 146 846 270 HOH HOH . F 4 HOH B 147 847 121 HOH HOH . F 4 HOH B 148 848 151 HOH HOH . F 4 HOH B 149 849 302 HOH HOH . F 4 HOH B 150 850 37 HOH HOH . F 4 HOH B 151 851 154 HOH HOH . F 4 HOH B 152 852 298 HOH HOH . F 4 HOH B 153 853 38 HOH HOH . F 4 HOH B 154 854 177 HOH HOH . F 4 HOH B 155 855 4 HOH HOH . F 4 HOH B 156 856 188 HOH HOH . F 4 HOH B 157 857 141 HOH HOH . F 4 HOH B 158 858 182 HOH HOH . F 4 HOH B 159 859 104 HOH HOH . F 4 HOH B 160 860 9 HOH HOH . F 4 HOH B 161 861 233 HOH HOH . F 4 HOH B 162 862 2 HOH HOH . F 4 HOH B 163 863 344 HOH HOH . F 4 HOH B 164 864 165 HOH HOH . F 4 HOH B 165 865 340 HOH HOH . F 4 HOH B 166 866 316 HOH HOH . F 4 HOH B 167 867 333 HOH HOH . F 4 HOH B 168 868 329 HOH HOH . F 4 HOH B 169 869 205 HOH HOH . F 4 HOH B 170 870 323 HOH HOH . F 4 HOH B 171 871 236 HOH HOH . F 4 HOH B 172 872 208 HOH HOH . F 4 HOH B 173 873 313 HOH HOH . F 4 HOH B 174 874 132 HOH HOH . F 4 HOH B 175 875 289 HOH HOH . F 4 HOH B 176 876 155 HOH HOH . F 4 HOH B 177 877 320 HOH HOH . F 4 HOH B 178 878 125 HOH HOH . F 4 HOH B 179 879 318 HOH HOH . F 4 HOH B 180 880 181 HOH HOH . F 4 HOH B 181 881 326 HOH HOH . F 4 HOH B 182 882 273 HOH HOH . F 4 HOH B 183 883 178 HOH HOH . F 4 HOH B 184 884 258 HOH HOH . F 4 HOH B 185 885 207 HOH HOH . F 4 HOH B 186 886 217 HOH HOH . F 4 HOH B 187 887 300 HOH HOH . F 4 HOH B 188 888 284 HOH HOH . F 4 HOH B 189 889 290 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . D 3 17.961 15.082 18.651 0.5 27.58 ? S DMS 702 A 1 HETATM 2 O O DMS . . . D 3 18.289 15.852 17.439 0.5 16.92 ? O DMS 702 A 1 HETATM 3 C C1 DMS . . . D 3 17.643 16.224 19.946 0.5 23.48 ? C1 DMS 702 A 1 HETATM 4 C C2 DMS . . . D 3 19.506 14.471 19.22 0.5 23.07 ? C2 DMS 702 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 487 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #