data_7OVD # _model_server_result.job_id h2SMJ2WziiP0ZjOZ9pEkGA _model_server_result.datetime_utc '2024-11-18 18:22:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ovd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":508}' # _entry.id 7OVD # _exptl.entry_id 7OVD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7OVD _cell.length_a 99.177 _cell.length_b 99.177 _cell.length_c 99.593 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OVD _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall 'P 6c' _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 I N N ? 3 J N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 252 A ALA 252 1_555 A N CME 253 A CME 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C CME 253 A CME 253 1_555 A N THR 254 A THR 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 41 n n C OXT ACT sing 42 n n C CH3 ACT sing 43 n n CH3 H1 ACT sing 44 n n CH3 H2 ACT sing 45 n n CH3 H3 ACT sing 46 n n # _atom_sites.entry_id 7OVD _atom_sites.fract_transf_matrix[1][1] 0.010083 _atom_sites.fract_transf_matrix[1][2] 0.005821 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010041 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1S2 A 1 501 501 1S2 102 . C 3 ACT A 1 502 601 ACT ACT . D 4 DMS A 1 503 701 DMS DMS . E 4 DMS A 1 504 801 DMS DMS . F 4 DMS A 1 505 901 DMS DMS . G 5 EDO A 1 506 1001 EDO EDO . H 5 EDO A 1 507 1101 EDO EDO . I 3 ACT A 1 508 1201 ACT ACT . J 3 ACT A 1 509 1301 ACT ACT . K 5 EDO A 1 510 1401 EDO EDO . L 4 DMS A 1 511 1501 DMS DMS . M 5 EDO A 1 512 1601 EDO EDO . N 5 EDO A 1 513 1701 EDO EDO . O 5 EDO A 1 514 1801 EDO EDO . P 3 ACT A 1 515 1 ACT ACT . Q 6 HOH A 1 601 76 HOH HOH . Q 6 HOH A 2 602 24 HOH HOH . Q 6 HOH A 3 603 5 HOH HOH . Q 6 HOH A 4 604 10 HOH HOH . Q 6 HOH A 5 605 17 HOH HOH . Q 6 HOH A 6 606 33 HOH HOH . Q 6 HOH A 7 607 12 HOH HOH . Q 6 HOH A 8 608 60 HOH HOH . Q 6 HOH A 9 609 37 HOH HOH . Q 6 HOH A 10 610 52 HOH HOH . Q 6 HOH A 11 611 71 HOH HOH . Q 6 HOH A 12 612 29 HOH HOH . Q 6 HOH A 13 613 25 HOH HOH . Q 6 HOH A 14 614 49 HOH HOH . Q 6 HOH A 15 615 9 HOH HOH . Q 6 HOH A 16 616 1 HOH HOH . Q 6 HOH A 17 617 46 HOH HOH . Q 6 HOH A 18 618 66 HOH HOH . Q 6 HOH A 19 619 2 HOH HOH . Q 6 HOH A 20 620 48 HOH HOH . Q 6 HOH A 21 621 31 HOH HOH . Q 6 HOH A 22 622 11 HOH HOH . Q 6 HOH A 23 623 20 HOH HOH . Q 6 HOH A 24 624 6 HOH HOH . Q 6 HOH A 25 625 23 HOH HOH . Q 6 HOH A 26 626 22 HOH HOH . Q 6 HOH A 27 627 13 HOH HOH . Q 6 HOH A 28 628 40 HOH HOH . Q 6 HOH A 29 629 45 HOH HOH . Q 6 HOH A 30 630 7 HOH HOH . Q 6 HOH A 31 631 14 HOH HOH . Q 6 HOH A 32 632 43 HOH HOH . Q 6 HOH A 33 633 3 HOH HOH . Q 6 HOH A 34 634 51 HOH HOH . Q 6 HOH A 35 635 32 HOH HOH . Q 6 HOH A 36 636 77 HOH HOH . Q 6 HOH A 37 637 4 HOH HOH . Q 6 HOH A 38 638 19 HOH HOH . Q 6 HOH A 39 639 39 HOH HOH . Q 6 HOH A 40 640 55 HOH HOH . Q 6 HOH A 41 641 18 HOH HOH . Q 6 HOH A 42 642 67 HOH HOH . Q 6 HOH A 43 643 26 HOH HOH . Q 6 HOH A 44 644 36 HOH HOH . Q 6 HOH A 45 645 38 HOH HOH . Q 6 HOH A 46 646 30 HOH HOH . Q 6 HOH A 47 647 47 HOH HOH . Q 6 HOH A 48 648 61 HOH HOH . Q 6 HOH A 49 649 42 HOH HOH . Q 6 HOH A 50 650 78 HOH HOH . Q 6 HOH A 51 651 53 HOH HOH . Q 6 HOH A 52 652 73 HOH HOH . Q 6 HOH A 53 653 82 HOH HOH . Q 6 HOH A 54 654 79 HOH HOH . Q 6 HOH A 55 655 74 HOH HOH . Q 6 HOH A 56 656 64 HOH HOH . Q 6 HOH A 57 657 72 HOH HOH . Q 6 HOH A 58 658 85 HOH HOH . Q 6 HOH A 59 659 83 HOH HOH . Q 6 HOH A 60 660 41 HOH HOH . Q 6 HOH A 61 661 62 HOH HOH . Q 6 HOH A 62 662 44 HOH HOH . Q 6 HOH A 63 663 81 HOH HOH . Q 6 HOH A 64 664 84 HOH HOH . Q 6 HOH A 65 665 75 HOH HOH . Q 6 HOH A 66 666 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . I 3 -37.147 16.063 19.942 1 51.97 ? C ACT 508 A 1 HETATM 2 O O ACT . . . I 3 -38.053 15.249 20.292 1 62.81 ? O ACT 508 A 1 HETATM 3 O OXT ACT . . . I 3 -36.574 16.938 20.632 1 58.84 ? OXT ACT 508 A 1 HETATM 4 C CH3 ACT . . . I 3 -36.617 15.941 18.485 1 46.16 ? CH3 ACT 508 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #