data_7OVF # _model_server_result.job_id OSpcYfZ0_Om6RuWwPqi6-Q _model_server_result.datetime_utc '2025-07-13 15:11:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ovf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":306}' # _entry.id 7OVF # _exptl.entry_id 7OVF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 345.457 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[2-[(4-fluorophenyl)methylsulfanyl]ethyl]-3-phenyl-1H-1,2,4-triazole-5-thione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OVF _cell.length_a 67.967 _cell.length_b 78.069 _cell.length_c 79.114 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OVF _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 88 A HIS 114 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc2 A ND1 HIS 90 A HIS 116 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc3 A OD2 ASP 92 A ASP 118 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc4 A NE2 HIS 127 A HIS 153 1_555 D ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc5 A NE2 HIS 153 A HIS 179 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.968 ? metalc ? metalc6 A SG CYS 172 A CYS 198 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc7 A NE2 HIS 214 A HIS 240 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc8 A ND1 HIS 225 A HIS 251 1_555 D ZN ZN . A ZN 303 6_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc9 B ZN ZN . A ZN 301 1_555 G NAB 1TH . A 1TH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc10 C ZN ZN . A ZN 302 1_555 G SAF 1TH . A 1TH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc11 D ZN ZN . A ZN 303 1_555 E OXT ACT . A ACT 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc12 D ZN ZN . A ZN 303 1_555 F O ACT . A ACT 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc13 D ZN ZN . A ZN 303 1_555 F OXT ACT . A ACT 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? # _chem_comp.formula 'C17 H16 F N3 S2' _chem_comp.formula_weight 345.457 _chem_comp.id 1TH _chem_comp.mon_nstd_flag . _chem_comp.name 4-[2-[(4-fluorophenyl)methylsulfanyl]ethyl]-3-phenyl-1H-1,2,4-triazole-5-thione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FAW CAT 1TH sing 1 n n CAT CAU 1TH doub 2 n y CAT CAS 1TH sing 3 n y CAU CAV 1TH sing 4 n y CAS CAR 1TH doub 5 n y CAV CAQ 1TH doub 6 n y CAR CAQ 1TH sing 7 n y CAQ CAP 1TH sing 8 n n CAP SAO 1TH sing 9 n n SAO CAN 1TH sing 10 n n CAN CAM 1TH sing 11 n n SAF CAE 1TH doub 12 n n CAM NAD 1TH sing 13 n n CAE NAD 1TH sing 14 n n CAE NAB 1TH sing 15 n n NAD CAC 1TH sing 16 n n CAL CAK 1TH doub 17 n y CAL CAG 1TH sing 18 n y NAB NAA 1TH sing 19 n n CAC CAG 1TH sing 20 n n CAC NAA 1TH doub 21 n n CAK CAJ 1TH sing 22 n y CAG CAH 1TH doub 23 n y CAJ CAI 1TH doub 24 n y CAH CAI 1TH sing 25 n y CAR H1 1TH sing 26 n n CAS H2 1TH sing 27 n n CAU H3 1TH sing 28 n n CAV H4 1TH sing 29 n n CAP H5 1TH sing 30 n n CAP H6 1TH sing 31 n n CAN H7 1TH sing 32 n n CAN H8 1TH sing 33 n n CAM H9 1TH sing 34 n n CAM H10 1TH sing 35 n n NAB H11 1TH sing 36 n n CAH H12 1TH sing 37 n n CAI H13 1TH sing 38 n n CAJ H14 1TH sing 39 n n CAK H15 1TH sing 40 n n CAL H16 1TH sing 41 n n # _atom_sites.entry_id 7OVF _atom_sites.fract_transf_matrix[1][1] 0.014713 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 2 ZN A 1 302 302 ZN ZN . D 2 ZN A 1 303 303 ZN ZN . E 3 ACT A 1 304 304 ACT ACT . F 3 ACT A 1 305 401 ACT ACT . G 4 1TH A 1 306 501 1TH UNL . H 5 HOH A 1 401 89 HOH HOH . H 5 HOH A 2 402 91 HOH HOH . H 5 HOH A 3 403 78 HOH HOH . H 5 HOH A 4 404 76 HOH HOH . H 5 HOH A 5 405 36 HOH HOH . H 5 HOH A 6 406 79 HOH HOH . H 5 HOH A 7 407 66 HOH HOH . H 5 HOH A 8 408 65 HOH HOH . H 5 HOH A 9 409 97 HOH HOH . H 5 HOH A 10 410 6 HOH HOH . H 5 HOH A 11 411 17 HOH HOH . H 5 HOH A 12 412 41 HOH HOH . H 5 HOH A 13 413 5 HOH HOH . H 5 HOH A 14 414 52 HOH HOH . H 5 HOH A 15 415 20 HOH HOH . H 5 HOH A 16 416 37 HOH HOH . H 5 HOH A 17 417 16 HOH HOH . H 5 HOH A 18 418 104 HOH HOH . H 5 HOH A 19 419 59 HOH HOH . H 5 HOH A 20 420 72 HOH HOH . H 5 HOH A 21 421 74 HOH HOH . H 5 HOH A 22 422 58 HOH HOH . H 5 HOH A 23 423 2 HOH HOH . H 5 HOH A 24 424 9 HOH HOH . H 5 HOH A 25 425 93 HOH HOH . H 5 HOH A 26 426 1 HOH HOH . H 5 HOH A 27 427 57 HOH HOH . H 5 HOH A 28 428 13 HOH HOH . H 5 HOH A 29 429 94 HOH HOH . H 5 HOH A 30 430 21 HOH HOH . H 5 HOH A 31 431 19 HOH HOH . H 5 HOH A 32 432 34 HOH HOH . H 5 HOH A 33 433 84 HOH HOH . H 5 HOH A 34 434 88 HOH HOH . H 5 HOH A 35 435 42 HOH HOH . H 5 HOH A 36 436 55 HOH HOH . H 5 HOH A 37 437 27 HOH HOH . H 5 HOH A 38 438 18 HOH HOH . H 5 HOH A 39 439 48 HOH HOH . H 5 HOH A 40 440 11 HOH HOH . H 5 HOH A 41 441 25 HOH HOH . H 5 HOH A 42 442 46 HOH HOH . H 5 HOH A 43 443 35 HOH HOH . H 5 HOH A 44 444 51 HOH HOH . H 5 HOH A 45 445 26 HOH HOH . H 5 HOH A 46 446 61 HOH HOH . H 5 HOH A 47 447 103 HOH HOH . H 5 HOH A 48 448 43 HOH HOH . H 5 HOH A 49 449 33 HOH HOH . H 5 HOH A 50 450 54 HOH HOH . H 5 HOH A 51 451 22 HOH HOH . H 5 HOH A 52 452 28 HOH HOH . H 5 HOH A 53 453 8 HOH HOH . H 5 HOH A 54 454 14 HOH HOH . H 5 HOH A 55 455 100 HOH HOH . H 5 HOH A 56 456 12 HOH HOH . H 5 HOH A 57 457 70 HOH HOH . H 5 HOH A 58 458 96 HOH HOH . H 5 HOH A 59 459 15 HOH HOH . H 5 HOH A 60 460 23 HOH HOH . H 5 HOH A 61 461 50 HOH HOH . H 5 HOH A 62 462 49 HOH HOH . H 5 HOH A 63 463 24 HOH HOH . H 5 HOH A 64 464 92 HOH HOH . H 5 HOH A 65 465 68 HOH HOH . H 5 HOH A 66 466 29 HOH HOH . H 5 HOH A 67 467 3 HOH HOH . H 5 HOH A 68 468 102 HOH HOH . H 5 HOH A 69 469 56 HOH HOH . H 5 HOH A 70 470 31 HOH HOH . H 5 HOH A 71 471 81 HOH HOH . H 5 HOH A 72 472 60 HOH HOH . H 5 HOH A 73 473 30 HOH HOH . H 5 HOH A 74 474 47 HOH HOH . H 5 HOH A 75 475 63 HOH HOH . H 5 HOH A 76 476 85 HOH HOH . H 5 HOH A 77 477 45 HOH HOH . H 5 HOH A 78 478 73 HOH HOH . H 5 HOH A 79 479 95 HOH HOH . H 5 HOH A 80 480 40 HOH HOH . H 5 HOH A 81 481 69 HOH HOH . H 5 HOH A 82 482 10 HOH HOH . H 5 HOH A 83 483 87 HOH HOH . H 5 HOH A 84 484 77 HOH HOH . H 5 HOH A 85 485 7 HOH HOH . H 5 HOH A 86 486 62 HOH HOH . H 5 HOH A 87 487 38 HOH HOH . H 5 HOH A 88 488 90 HOH HOH . H 5 HOH A 89 489 86 HOH HOH . H 5 HOH A 90 490 99 HOH HOH . H 5 HOH A 91 491 32 HOH HOH . H 5 HOH A 92 492 4 HOH HOH . H 5 HOH A 93 493 64 HOH HOH . H 5 HOH A 94 494 101 HOH HOH . H 5 HOH A 95 495 98 HOH HOH . H 5 HOH A 96 496 39 HOH HOH . H 5 HOH A 97 497 75 HOH HOH . H 5 HOH A 98 498 83 HOH HOH . H 5 HOH A 99 499 44 HOH HOH . H 5 HOH A 100 500 67 HOH HOH . H 5 HOH A 101 501 71 HOH HOH . H 5 HOH A 102 502 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAR 1TH . . . G 4 27.588 19.416 2.97 0.6 61.31 ? CAR 1TH 306 A 1 HETATM 2 C CAS 1TH . . . G 4 27.598 19.784 1.633 0.6 58.26 ? CAS 1TH 306 A 1 HETATM 3 C CAT 1TH . . . G 4 28.273 18.979 0.729 0.6 57.32 ? CAT 1TH 306 A 1 HETATM 4 F FAW 1TH . . . G 4 28.289 19.31 -0.507 0.6 60.6 ? FAW 1TH 306 A 1 HETATM 5 C CAU 1TH . . . G 4 28.931 17.828 1.149 0.6 59.75 ? CAU 1TH 306 A 1 HETATM 6 C CAV 1TH . . . G 4 28.929 17.449 2.482 0.6 57.35 ? CAV 1TH 306 A 1 HETATM 7 C CAQ 1TH . . . G 4 28.244 18.259 3.373 0.6 58.75 ? CAQ 1TH 306 A 1 HETATM 8 C CAP 1TH . . . G 4 28.246 17.942 4.695 1 58.79 ? CAP 1TH 306 A 1 HETATM 9 S SAO 1TH . . . G 4 29.654 18.779 5.542 1 51.42 ? SAO 1TH 306 A 1 HETATM 10 C CAN 1TH . . . G 4 29.659 17.662 6.969 1 49 ? CAN 1TH 306 A 1 HETATM 11 C CAM 1TH . . . G 4 28.645 18.161 7.998 1 43.73 ? CAM 1TH 306 A 1 HETATM 12 N NAD 1TH . . . G 4 28.328 17.094 8.965 1 38.36 ? NAD 1TH 306 A 1 HETATM 13 C CAE 1TH . . . G 4 27.221 16.33 8.891 1 37.77 ? CAE 1TH 306 A 1 HETATM 14 S SAF 1TH . . . G 4 25.866 16.445 7.631 1 33.48 ? SAF 1TH 306 A 1 HETATM 15 N NAB 1TH . . . G 4 27.19 15.453 9.891 1 37.95 ? NAB 1TH 306 A 1 HETATM 16 N NAA 1TH . . . G 4 28.326 15.666 10.574 1 33 ? NAA 1TH 306 A 1 HETATM 17 C CAC 1TH . . . G 4 29.02 16.657 10.032 1 40.34 ? CAC 1TH 306 A 1 HETATM 18 C CAG 1TH . . . G 4 30.225 17.08 10.529 1 43.85 ? CAG 1TH 306 A 1 HETATM 19 C CAH 1TH . . . G 4 30.412 17.221 11.913 1 42.1 ? CAH 1TH 306 A 1 HETATM 20 C CAI 1TH . . . G 4 31.643 17.633 12.441 1 48.33 ? CAI 1TH 306 A 1 HETATM 21 C CAJ 1TH . . . G 4 32.708 17.908 11.591 1 46.15 ? CAJ 1TH 306 A 1 HETATM 22 C CAK 1TH . . . G 4 32.551 17.749 10.21 1 51.58 ? CAK 1TH 306 A 1 HETATM 23 C CAL 1TH . . . G 4 31.324 17.325 9.68 1 46.6 ? CAL 1TH 306 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #