data_7OWE # _model_server_result.job_id 0c5_lFp8sZOtyQuZV-9lww _model_server_result.datetime_utc '2025-02-18 20:03:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7owe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 7OWE # _exptl.entry_id 7OWE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 916.367 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "BIS(ADENOSINE)-5'-PENTAPHOSPHATE" _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OWE _cell.length_a 69.781 _cell.length_b 143.164 _cell.length_c 158.714 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OWE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I 1 1 D,E,F,J,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C20 H29 N10 O22 P5' _chem_comp.formula_weight 916.367 _chem_comp.id AP5 _chem_comp.mon_nstd_flag . _chem_comp.name "BIS(ADENOSINE)-5'-PENTAPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A AP5 doub 13 n n PA O2A AP5 sing 14 n n PA O3A AP5 sing 15 n n PA O5F AP5 sing 16 n n O2A HOA2 AP5 sing 17 n n O3A PB AP5 sing 18 n n PB O1B AP5 doub 19 n n PB O2B AP5 sing 20 n n PB O3B AP5 sing 21 n n O2B HOB2 AP5 sing 22 n n O3B PG AP5 sing 23 n n PG O1G AP5 doub 24 n n PG O2G AP5 sing 25 n n PG O3G AP5 sing 26 n n O2G HOG2 AP5 sing 27 n n O3G PD AP5 sing 28 n n PD O1D AP5 doub 29 n n PD O2D AP5 sing 30 n n PD O3D AP5 sing 31 n n O2D HOD2 AP5 sing 32 n n O3D PE AP5 sing 33 n n PE O1E AP5 doub 34 n n PE O2E AP5 sing 35 n n PE O5J AP5 sing 36 n n O2E HOE2 AP5 sing 37 n n O5F C5F AP5 sing 38 n n C5F C4F AP5 sing 39 n n C5F H51A AP5 sing 40 n n C5F H52A AP5 sing 41 n n C4F O4F AP5 sing 42 n n C4F C3F AP5 sing 43 n n C4F H4F AP5 sing 44 n n O4F C1F AP5 sing 45 n n C3F O3F AP5 sing 46 n n C3F C2F AP5 sing 47 n n C3F H3F AP5 sing 48 n n O3F HO3A AP5 sing 49 n n C2F O2F AP5 sing 50 n n C2F C1F AP5 sing 51 n n C2F H2F AP5 sing 52 n n O2F HO2A AP5 sing 53 n n C1F N9A AP5 sing 54 n n C1F H1F AP5 sing 55 n n N9A C8A AP5 sing 56 n y N9A C4A AP5 sing 57 n y C8A N7A AP5 doub 58 n y C8A H8A AP5 sing 59 n n N7A C5A AP5 sing 60 n y C5A C6A AP5 sing 61 n y C5A C4A AP5 doub 62 n y C6A N6A AP5 sing 63 n n C6A N1A AP5 doub 64 n y N6A H61A AP5 sing 65 n n N6A H62A AP5 sing 66 n n N1A C2A AP5 sing 67 n y C2A N3A AP5 doub 68 n y C2A H2A AP5 sing 69 n n N3A C4A AP5 sing 70 n y O5J C5J AP5 sing 71 n n C5J C4J AP5 sing 72 n n C5J H51B AP5 sing 73 n n C5J H52B AP5 sing 74 n n C4J O4J AP5 sing 75 n n C4J C3J AP5 sing 76 n n C4J H4J AP5 sing 77 n n O4J C1J AP5 sing 78 n n C3J O3J AP5 sing 79 n n C3J C2J AP5 sing 80 n n C3J H3J AP5 sing 81 n n O3J HO3B AP5 sing 82 n n C2J O2J AP5 sing 83 n n C2J C1J AP5 sing 84 n n C2J H2J AP5 sing 85 n n O2J HO2B AP5 sing 86 n n C1J N9B AP5 sing 87 n n C1J H1J AP5 sing 88 n n N9B C8B AP5 sing 89 n y N9B C4B AP5 sing 90 n y C8B N7B AP5 doub 91 n y C8B H8B AP5 sing 92 n n N7B C5B AP5 sing 93 n y C5B C6B AP5 sing 94 n y C5B C4B AP5 doub 95 n y C6B N6B AP5 sing 96 n n C6B N1B AP5 doub 97 n y N6B H61B AP5 sing 98 n n N6B H62B AP5 sing 99 n n N1B C2B AP5 sing 100 n y C2B N3B AP5 doub 101 n y C2B H2B AP5 sing 102 n n N3B C4B AP5 sing 103 n y # _atom_sites.entry_id 7OWE _atom_sites.fract_transf_matrix[1][1] 0.014331 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006985 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 AP5 E 1 201 5 AP5 AP5 . H 2 AP5 F 1 201 6 AP5 AP5 . I 2 AP5 D 1 201 4 AP5 AP5 . J 2 AP5 A 1 201 1 AP5 AP5 . K 2 AP5 B 1 201 2 AP5 AP5 . L 2 AP5 C 1 201 3 AP5 AP5 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA AP5 . . . I 2 -23.632 27.646 -20.989 1 89.06 ? PA AP5 201 D 1 HETATM 2 O O1A AP5 . . . I 2 -23.611 29.164 -20.724 1 91.82 ? O1A AP5 201 D 1 HETATM 3 O O2A AP5 . . . I 2 -22.208 27.14 -21.221 1 101.49 ? O2A AP5 201 D 1 HETATM 4 O O3A AP5 . . . I 2 -24.25 26.903 -19.723 1 85.05 ? O3A AP5 201 D 1 HETATM 5 P PB AP5 . . . I 2 -24.437 27.385 -18.125 1 78.5 ? PB AP5 201 D 1 HETATM 6 O O1B AP5 . . . I 2 -23.957 26.271 -17.213 1 89.84 ? O1B AP5 201 D 1 HETATM 7 O O2B AP5 . . . I 2 -25.916 27.71 -17.853 1 81.18 ? O2B AP5 201 D 1 HETATM 8 O O3B AP5 . . . I 2 -23.538 28.725 -17.824 1 98.76 ? O3B AP5 201 D 1 HETATM 9 P PG AP5 . . . I 2 -22.641 29.14 -16.528 1 94.42 ? PG AP5 201 D 1 HETATM 10 O O1G AP5 . . . I 2 -23.22 30.348 -15.899 1 106.39 ? O1G AP5 201 D 1 HETATM 11 O O2G AP5 . . . I 2 -21.248 29.409 -16.963 1 99.78 ? O2G AP5 201 D 1 HETATM 12 O O3G AP5 . . . I 2 -22.631 27.906 -15.414 1 105.19 ? O3G AP5 201 D 1 HETATM 13 P PD AP5 . . . I 2 -21.414 26.987 -14.836 1 91.33 ? PD AP5 201 D 1 HETATM 14 O O1D AP5 . . . I 2 -21.809 25.495 -14.936 1 94.2 ? O1D AP5 201 D 1 HETATM 15 O O2D AP5 . . . I 2 -20.161 27.224 -15.638 1 96.35 ? O2D AP5 201 D 1 HETATM 16 O O3D AP5 . . . I 2 -21.106 27.384 -13.294 1 87.34 ? O3D AP5 201 D 1 HETATM 17 P PE AP5 . . . I 2 -20.015 28.423 -12.661 1 96.73 ? PE AP5 201 D 1 HETATM 18 O O1E AP5 . . . I 2 -18.658 27.806 -12.733 1 71.66 ? O1E AP5 201 D 1 HETATM 19 O O2E AP5 . . . I 2 -20.029 29.722 -13.422 1 95.26 ? O2E AP5 201 D 1 HETATM 20 O O5F AP5 . . . I 2 -24.593 27.307 -22.303 1 82.88 ? O5F AP5 201 D 1 HETATM 21 C C5F AP5 . . . I 2 -25.932 27.03 -22.035 1 76.63 ? C5F AP5 201 D 1 HETATM 22 C C4F AP5 . . . I 2 -26.793 27.364 -23.223 1 78.04 ? C4F AP5 201 D 1 HETATM 23 O O4F AP5 . . . I 2 -25.998 27.366 -24.433 1 86.66 ? O4F AP5 201 D 1 HETATM 24 C C3F AP5 . . . I 2 -27.938 26.372 -23.467 1 80.8 ? C3F AP5 201 D 1 HETATM 25 O O3F AP5 . . . I 2 -29.15 26.885 -22.922 1 80.68 ? O3F AP5 201 D 1 HETATM 26 C C2F AP5 . . . I 2 -28.05 26.296 -24.999 1 80.72 ? C2F AP5 201 D 1 HETATM 27 O O2F AP5 . . . I 2 -28.808 27.405 -25.47 1 78.96 ? O2F AP5 201 D 1 HETATM 28 C C1F AP5 . . . I 2 -26.591 26.499 -25.387 1 67.33 ? C1F AP5 201 D 1 HETATM 29 N N9A AP5 . . . I 2 -25.905 25.22 -25.435 1 75.8 ? N9A AP5 201 D 1 HETATM 30 C C8A AP5 . . . I 2 -24.874 24.92 -24.666 1 75.32 ? C8A AP5 201 D 1 HETATM 31 N N7A AP5 . . . I 2 -24.456 23.675 -24.951 1 70.42 ? N7A AP5 201 D 1 HETATM 32 C C5A AP5 . . . I 2 -25.237 23.193 -25.914 1 77.34 ? C5A AP5 201 D 1 HETATM 33 C C6A AP5 . . . I 2 -25.266 21.984 -26.584 1 68.51 ? C6A AP5 201 D 1 HETATM 34 N N6A AP5 . . . I 2 -24.399 21.004 -26.322 1 87.37 ? N6A AP5 201 D 1 HETATM 35 N N1A AP5 . . . I 2 -26.18 21.771 -27.525 1 67.62 ? N1A AP5 201 D 1 HETATM 36 C C2A AP5 . . . I 2 -27.058 22.766 -27.788 1 82.24 ? C2A AP5 201 D 1 HETATM 37 N N3A AP5 . . . I 2 -27.095 23.939 -27.197 1 75.66 ? N3A AP5 201 D 1 HETATM 38 C C4A AP5 . . . I 2 -26.168 24.175 -26.232 1 76.89 ? C4A AP5 201 D 1 HETATM 39 O O5J AP5 . . . I 2 -20.386 28.712 -11.116 1 91.91 ? O5J AP5 201 D 1 HETATM 40 C C5J AP5 . . . I 2 -21.773 28.929 -10.762 1 95.96 ? C5J AP5 201 D 1 HETATM 41 C C4J AP5 . . . I 2 -21.82 29.87 -9.523 1 95.68 ? C4J AP5 201 D 1 HETATM 42 O O4J AP5 . . . I 2 -21.56 29.106 -8.325 1 86.14 ? O4J AP5 201 D 1 HETATM 43 C C3J AP5 . . . I 2 -20.671 30.908 -9.569 1 81.69 ? C3J AP5 201 D 1 HETATM 44 O O3J AP5 . . . I 2 -20.979 32.005 -8.713 1 101.82 ? O3J AP5 201 D 1 HETATM 45 C C2J AP5 . . . I 2 -19.502 30.126 -8.994 1 95.45 ? C2J AP5 201 D 1 HETATM 46 O O2J AP5 . . . I 2 -18.557 31.026 -8.42 1 95.83 ? O2J AP5 201 D 1 HETATM 47 C C1J AP5 . . . I 2 -20.235 29.35 -7.9 1 100.43 ? C1J AP5 201 D 1 HETATM 48 N N9B AP5 . . . I 2 -19.596 28.085 -7.655 1 94.21 ? N9B AP5 201 D 1 HETATM 49 C C8B AP5 . . . I 2 -18.898 27.3 -8.492 1 88.02 ? C8B AP5 201 D 1 HETATM 50 N N7B AP5 . . . I 2 -18.478 26.199 -7.85 1 82.94 ? N7B AP5 201 D 1 HETATM 51 C C5B AP5 . . . I 2 -18.916 26.277 -6.582 1 95.58 ? C5B AP5 201 D 1 HETATM 52 C C6B AP5 . . . I 2 -18.788 25.441 -5.485 1 100.12 ? C6B AP5 201 D 1 HETATM 53 N N6B AP5 . . . I 2 -18.114 24.289 -5.571 1 98.4 ? N6B AP5 201 D 1 HETATM 54 N N1B AP5 . . . I 2 -19.334 25.778 -4.337 1 98.15 ? N1B AP5 201 D 1 HETATM 55 C C2B AP5 . . . I 2 -20.008 26.945 -4.286 1 87.08 ? C2B AP5 201 D 1 HETATM 56 N N3B AP5 . . . I 2 -20.168 27.787 -5.283 1 91.36 ? N3B AP5 201 D 1 HETATM 57 C C4B AP5 . . . I 2 -19.623 27.466 -6.459 1 91.06 ? C4B AP5 201 D 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 57 #