data_7OXE # _model_server_result.job_id 6aT1PGgUQPIGp3naOsdy9w _model_server_result.datetime_utc '2024-12-27 16:09:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 7OXE # _exptl.entry_id 7OXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.22 _cell.angle_gamma 90 _cell.entry_id 7OXE _cell.length_a 47.383 _cell.length_b 37.533 _cell.length_c 62.685 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 237 n n C10 C9 OLC doub 238 n n C10 C11 OLC sing 239 n n C9 C8 OLC sing 240 n n C17 C16 OLC sing 241 z n C11 C12 OLC sing 242 n n C8 C7 OLC sing 243 n n C24 C22 OLC sing 244 n n C24 O25 OLC sing 245 n n C16 C15 OLC sing 246 n n C12 C13 OLC sing 247 n n C7 C6 OLC sing 248 n n C15 C14 OLC sing 249 n n C13 C14 OLC sing 250 n n C6 C5 OLC sing 251 n n C5 C4 OLC sing 252 n n C4 C3 OLC sing 253 n n C3 C2 OLC sing 254 n n C2 C1 OLC sing 255 n n C21 C22 OLC sing 256 n n C21 O20 OLC sing 257 n n C1 O19 OLC doub 258 n n C1 O20 OLC sing 259 n n C22 O23 OLC sing 260 n n C18 H18 OLC sing 261 n n C18 H18A OLC sing 262 n n C18 H18B OLC sing 263 n n C10 H10 OLC sing 264 n n C9 H9 OLC sing 265 n n C17 H17 OLC sing 266 n n C17 H17A OLC sing 267 n n C11 H11 OLC sing 268 n n C11 H11A OLC sing 269 n n C8 H8 OLC sing 270 n n C8 H8A OLC sing 271 n n C24 H24 OLC sing 272 n n C24 H24A OLC sing 273 n n C16 H16 OLC sing 274 n n C16 H16A OLC sing 275 n n C12 H12 OLC sing 276 n n C12 H12A OLC sing 277 n n C7 H7 OLC sing 278 n n C7 H7A OLC sing 279 n n C15 H15 OLC sing 280 n n C15 H15A OLC sing 281 n n C13 H13 OLC sing 282 n n C13 H13A OLC sing 283 n n C6 H6 OLC sing 284 n n C6 H6A OLC sing 285 n n C14 H14 OLC sing 286 n n C14 H14A OLC sing 287 n n C5 H5 OLC sing 288 n n C5 H5A OLC sing 289 n n C4 H4 OLC sing 290 n n C4 H4A OLC sing 291 n n C3 H3 OLC sing 292 n n C3 H3A OLC sing 293 n n C2 H2 OLC sing 294 n n C2 H2A OLC sing 295 n n C21 H21 OLC sing 296 n n C21 H21A OLC sing 297 n n C22 H22 OLC sing 298 n n O25 HO25 OLC sing 299 n n O23 HO23 OLC sing 300 n n # _atom_sites.entry_id 7OXE _atom_sites.fract_transf_matrix[1][1] 0.021105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001928 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016019 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OLC A 1 301 301 OLC OLC . D 3 OLC A 1 302 401 OLC OLC . E 3 OLC A 1 303 501 OLC OLC . F 3 OLC A 1 304 601 OLC OLC . G 4 HOH A 1 401 2 HOH HOH . G 4 HOH A 2 402 3 HOH HOH . G 4 HOH A 3 403 45 HOH HOH . G 4 HOH A 4 404 16 HOH HOH . G 4 HOH A 5 405 31 HOH HOH . G 4 HOH A 6 406 21 HOH HOH . G 4 HOH A 7 407 35 HOH HOH . G 4 HOH A 8 408 49 HOH HOH . G 4 HOH A 9 409 1 HOH HOH . G 4 HOH A 10 410 12 HOH HOH . G 4 HOH A 11 411 10 HOH HOH . G 4 HOH A 12 412 8 HOH HOH . G 4 HOH A 13 413 19 HOH HOH . G 4 HOH A 14 414 47 HOH HOH . G 4 HOH A 15 415 7 HOH HOH . G 4 HOH A 16 416 51 HOH HOH . G 4 HOH A 17 417 5 HOH HOH . G 4 HOH A 18 418 17 HOH HOH . G 4 HOH A 19 419 40 HOH HOH . G 4 HOH A 20 420 44 HOH HOH . G 4 HOH A 21 421 23 HOH HOH . G 4 HOH A 22 422 11 HOH HOH . G 4 HOH A 23 423 15 HOH HOH . G 4 HOH A 24 424 20 HOH HOH . G 4 HOH A 25 425 4 HOH HOH . G 4 HOH A 26 426 25 HOH HOH . G 4 HOH A 27 427 22 HOH HOH . G 4 HOH A 28 428 30 HOH HOH . G 4 HOH A 29 429 14 HOH HOH . G 4 HOH A 30 430 9 HOH HOH . G 4 HOH A 31 431 24 HOH HOH . G 4 HOH A 32 432 18 HOH HOH . G 4 HOH A 33 433 6 HOH HOH . G 4 HOH A 34 434 50 HOH HOH . G 4 HOH A 35 435 27 HOH HOH . G 4 HOH A 36 436 42 HOH HOH . G 4 HOH A 37 437 48 HOH HOH . G 4 HOH A 38 438 26 HOH HOH . G 4 HOH A 39 439 46 HOH HOH . G 4 HOH A 40 440 43 HOH HOH . G 4 HOH A 41 441 36 HOH HOH . G 4 HOH A 42 442 37 HOH HOH . G 4 HOH A 43 443 38 HOH HOH . G 4 HOH A 44 444 34 HOH HOH . G 4 HOH A 45 445 39 HOH HOH . G 4 HOH A 46 446 33 HOH HOH . H 4 HOH B 1 101 41 HOH HOH . H 4 HOH B 2 102 32 HOH HOH . H 4 HOH B 3 103 28 HOH HOH . H 4 HOH B 4 104 29 HOH HOH . H 4 HOH B 5 105 13 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . F 3 57.103 33.409 66.074 1 54.9 ? C18 OLC 304 A 1 HETATM 2 C C10 OLC . . . F 3 49.439 36.861 64.214 1 56.67 ? C10 OLC 304 A 1 HETATM 3 C C9 OLC . . . F 3 48.203 37.35 64.156 1 57.21 ? C9 OLC 304 A 1 HETATM 4 C C17 OLC . . . F 3 56.165 34.247 66.957 1 55.09 ? C17 OLC 304 A 1 HETATM 5 C C11 OLC . . . F 3 49.871 35.596 64.857 1 56.19 ? C11 OLC 304 A 1 HETATM 6 C C8 OLC . . . F 3 46.954 36.771 64.766 1 57.59 ? C8 OLC 304 A 1 HETATM 7 C C24 OLC . . . F 3 40.901 44.914 62.279 1 63.22 ? C24 OLC 304 A 1 HETATM 8 C C16 OLC . . . F 3 55.049 34.958 66.165 1 55.16 ? C16 OLC 304 A 1 HETATM 9 C C12 OLC . . . F 3 50.825 34.902 63.87 1 56.01 ? C12 OLC 304 A 1 HETATM 10 C C7 OLC . . . F 3 45.741 37.559 64.238 1 58.15 ? C7 OLC 304 A 1 HETATM 11 C C15 OLC . . . F 3 54.154 33.898 65.504 1 55.51 ? C15 OLC 304 A 1 HETATM 12 C C13 OLC . . . F 3 52.315 35.113 64.2 1 55.71 ? C13 OLC 304 A 1 HETATM 13 C C6 OLC . . . F 3 45.349 38.786 65.069 1 58.8 ? C6 OLC 304 A 1 HETATM 14 C C14 OLC . . . F 3 52.67 34.289 65.438 1 55.61 ? C14 OLC 304 A 1 HETATM 15 C C5 OLC . . . F 3 46.468 39.808 65.194 1 59.77 ? C5 OLC 304 A 1 HETATM 16 C C4 OLC . . . F 3 46.742 40.604 63.895 1 60.81 ? C4 OLC 304 A 1 HETATM 17 C C3 OLC . . . F 3 45.819 41.827 63.757 1 61.55 ? C3 OLC 304 A 1 HETATM 18 C C2 OLC . . . F 3 46.56 42.974 63.024 1 62.16 ? C2 OLC 304 A 1 HETATM 19 C C21 OLC . . . F 3 43.355 44.867 62.945 1 63.12 ? C21 OLC 304 A 1 HETATM 20 C C1 OLC . . . F 3 45.699 44.222 62.952 1 62.66 ? C1 OLC 304 A 1 HETATM 21 C C22 OLC . . . F 3 42.105 43.996 62.62 1 63.37 ? C22 OLC 304 A 1 HETATM 22 O O19 OLC . . . F 3 46.057 45.397 62.869 1 62.8 ? O19 OLC 304 A 1 HETATM 23 O O25 OLC . . . F 3 39.86 44.031 61.946 1 63.1 ? O25 OLC 304 A 1 HETATM 24 O O23 OLC . . . F 3 42.376 43.126 61.573 1 63.84 ? O23 OLC 304 A 1 HETATM 25 O O20 OLC . . . F 3 44.38 43.888 63.01 1 62.8 ? O20 OLC 304 A 1 HETATM 26 H H18 OLC . . . F 3 57.985 33.075 66.617 0 54.9 ? H18 OLC 304 A 1 HETATM 27 H H18A OLC . . . F 3 57.456 33.972 65.211 0 54.9 ? H18A OLC 304 A 1 HETATM 28 H H18B OLC . . . F 3 56.618 32.513 65.689 0 54.9 ? H18B OLC 304 A 1 HETATM 29 H H10 OLC . . . F 3 50.251 37.424 63.756 0 56.67 ? H10 OLC 304 A 1 HETATM 30 H H9 OLC . . . F 3 48.051 38.268 63.591 0 57.21 ? H9 OLC 304 A 1 HETATM 31 H H17 OLC . . . F 3 56.751 34.985 67.503 0 55.09 ? H17 OLC 304 A 1 HETATM 32 H H17A OLC . . . F 3 55.733 33.616 67.733 0 55.09 ? H17A OLC 304 A 1 HETATM 33 H H11 OLC . . . F 3 49.014 34.961 65.074 0 56.19 ? H11 OLC 304 A 1 HETATM 34 H H11A OLC . . . F 3 50.344 35.782 65.82 0 56.19 ? H11A OLC 304 A 1 HETATM 35 H H8 OLC . . . F 3 47.017 36.83 65.851 0 57.59 ? H8 OLC 304 A 1 HETATM 36 H H8A OLC . . . F 3 46.846 35.71 64.546 0 57.59 ? H8A OLC 304 A 1 HETATM 37 H H24 OLC . . . F 3 41.158 45.58 61.457 0 63.22 ? H24 OLC 304 A 1 HETATM 38 H H24A OLC . . . F 3 40.641 45.554 63.121 0 63.22 ? H24A OLC 304 A 1 HETATM 39 H H16 OLC . . . F 3 55.481 35.615 65.412 0 55.16 ? H16 OLC 304 A 1 HETATM 40 H H16A OLC . . . F 3 54.476 35.612 66.821 0 55.16 ? H16A OLC 304 A 1 HETATM 41 H H12 OLC . . . F 3 50.622 35.267 62.864 0 56.01 ? H12 OLC 304 A 1 HETATM 42 H H12A OLC . . . F 3 50.59 33.84 63.82 0 56.01 ? H12A OLC 304 A 1 HETATM 43 H H7 OLC . . . F 3 44.882 36.895 64.192 0 58.15 ? H7 OLC 304 A 1 HETATM 44 H H7A OLC . . . F 3 45.894 37.83 63.195 0 58.15 ? H7A OLC 304 A 1 HETATM 45 H H15 OLC . . . F 3 54.246 32.957 66.046 0 55.51 ? H15 OLC 304 A 1 HETATM 46 H H15A OLC . . . F 3 54.531 33.669 64.509 0 55.51 ? H15A OLC 304 A 1 HETATM 47 H H13 OLC . . . F 3 52.522 36.168 64.37 0 55.71 ? H13 OLC 304 A 1 HETATM 48 H H13A OLC . . . F 3 52.929 34.83 63.347 0 55.71 ? H13A OLC 304 A 1 HETATM 49 H H6 OLC . . . F 3 45.03 38.471 66.061 0 58.8 ? H6 OLC 304 A 1 HETATM 50 H H6A OLC . . . F 3 44.465 39.255 64.638 0 58.8 ? H6A OLC 304 A 1 HETATM 51 H H14 OLC . . . F 3 52.39 34.831 66.339 0 55.61 ? H14 OLC 304 A 1 HETATM 52 H H14A OLC . . . F 3 52.068 33.383 65.473 0 55.61 ? H14A OLC 304 A 1 HETATM 53 H H5 OLC . . . F 3 47.386 39.332 65.534 0 59.77 ? H5 OLC 304 A 1 HETATM 54 H H5A OLC . . . F 3 46.225 40.491 66.005 0 59.77 ? H5A OLC 304 A 1 HETATM 55 H H4 OLC . . . F 3 46.626 39.982 63.01 0 60.81 ? H4 OLC 304 A 1 HETATM 56 H H4A OLC . . . F 3 47.786 40.912 63.871 0 60.81 ? H4A OLC 304 A 1 HETATM 57 H H3 OLC . . . F 3 45.464 42.171 64.728 0 61.55 ? H3 OLC 304 A 1 HETATM 58 H H3A OLC . . . F 3 44.926 41.53 63.209 0 61.55 ? H3A OLC 304 A 1 HETATM 59 H H2 OLC . . . F 3 46.838 42.679 62.014 0 62.16 ? H2 OLC 304 A 1 HETATM 60 H H2A OLC . . . F 3 47.499 43.217 63.519 0 62.16 ? H2A OLC 304 A 1 HETATM 61 H H21 OLC . . . F 3 43.256 45.411 63.883 0 63.12 ? H21 OLC 304 A 1 HETATM 62 H H21A OLC . . . F 3 43.544 45.596 62.158 0 63.12 ? H21A OLC 304 A 1 HETATM 63 H H22 OLC . . . F 3 41.869 43.326 63.445 0 63.37 ? H22 OLC 304 A 1 HETATM 64 H HO25 OLC . . . F 3 40.215 43.415 61.252 0 63.1 ? HO25 OLC 304 A 1 HETATM 65 H HO23 OLC . . . F 3 42.885 43.617 60.875 0 63.84 ? HO23 OLC 304 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 224 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 65 #