data_7OXL # _model_server_result.job_id 3UawiWpfcJiThWerb8NmMA _model_server_result.datetime_utc '2024-11-08 03:56:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oxl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7OXL # _exptl.entry_id 7OXL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 977.85 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FAD-MDL72527 adduct' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7OXL _cell.length_a 190.919 _cell.length_b 190.919 _cell.length_c 43.574 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OXL _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_558 -x,-x+y,-z+3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 130.722 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 102 A CYS 102 1_555 A SG CYS 325 A CYS 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 187 A CYS 187 1_555 A SG CYS 373 A CYS 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? # _chem_comp.formula 'C39 H53 N11 O15 P2' _chem_comp.formula_weight 977.85 _chem_comp.id 6YU _chem_comp.mon_nstd_flag . _chem_comp.name 'FAD-MDL72527 adduct' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7OXL _atom_sites.fract_transf_matrix[1][1] 0.005238 _atom_sites.fract_transf_matrix[1][2] 0.003024 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006048 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6YU A 1 501 501 6YU 6YU . C 3 CL A 1 502 1 CL CL . D 4 MPD A 1 503 2 MPD MPD . E 3 CL A 1 504 3 CL CL . F 5 HOH A 1 601 14 HOH HOH . F 5 HOH A 2 602 68 HOH HOH . F 5 HOH A 3 603 10 HOH HOH . F 5 HOH A 4 604 85 HOH HOH . F 5 HOH A 5 605 91 HOH HOH . F 5 HOH A 6 606 66 HOH HOH . F 5 HOH A 7 607 26 HOH HOH . F 5 HOH A 8 608 11 HOH HOH . F 5 HOH A 9 609 78 HOH HOH . F 5 HOH A 10 610 12 HOH HOH . F 5 HOH A 11 611 25 HOH HOH . F 5 HOH A 12 612 92 HOH HOH . F 5 HOH A 13 613 67 HOH HOH . F 5 HOH A 14 614 40 HOH HOH . F 5 HOH A 15 615 15 HOH HOH . F 5 HOH A 16 616 97 HOH HOH . F 5 HOH A 17 617 35 HOH HOH . F 5 HOH A 18 618 21 HOH HOH . F 5 HOH A 19 619 13 HOH HOH . F 5 HOH A 20 620 42 HOH HOH . F 5 HOH A 21 621 24 HOH HOH . F 5 HOH A 22 622 29 HOH HOH . F 5 HOH A 23 623 54 HOH HOH . F 5 HOH A 24 624 58 HOH HOH . F 5 HOH A 25 625 88 HOH HOH . F 5 HOH A 26 626 47 HOH HOH . F 5 HOH A 27 627 34 HOH HOH . F 5 HOH A 28 628 19 HOH HOH . F 5 HOH A 29 629 51 HOH HOH . F 5 HOH A 30 630 7 HOH HOH . F 5 HOH A 31 631 98 HOH HOH . F 5 HOH A 32 632 65 HOH HOH . F 5 HOH A 33 633 89 HOH HOH . F 5 HOH A 34 634 8 HOH HOH . F 5 HOH A 35 635 31 HOH HOH . F 5 HOH A 36 636 9 HOH HOH . F 5 HOH A 37 637 49 HOH HOH . F 5 HOH A 38 638 36 HOH HOH . F 5 HOH A 39 639 17 HOH HOH . F 5 HOH A 40 640 27 HOH HOH . F 5 HOH A 41 641 30 HOH HOH . F 5 HOH A 42 642 63 HOH HOH . F 5 HOH A 43 643 45 HOH HOH . F 5 HOH A 44 644 53 HOH HOH . F 5 HOH A 45 645 96 HOH HOH . F 5 HOH A 46 646 60 HOH HOH . F 5 HOH A 47 647 55 HOH HOH . F 5 HOH A 48 648 95 HOH HOH . F 5 HOH A 49 649 16 HOH HOH . F 5 HOH A 50 650 93 HOH HOH . F 5 HOH A 51 651 70 HOH HOH . F 5 HOH A 52 652 73 HOH HOH . F 5 HOH A 53 653 83 HOH HOH . F 5 HOH A 54 654 80 HOH HOH . F 5 HOH A 55 655 79 HOH HOH . F 5 HOH A 56 656 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 6YU . . . B 2 -20.701 97.367 57.456 1 48.43 ? C2 6YU 501 A 1 HETATM 2 C C4 6YU . . . B 2 -21.878 99.381 57.415 1 50.41 ? C4 6YU 501 A 1 HETATM 3 N N5 6YU . . . B 2 -23.886 99.582 58.892 1 51.59 ? N5 6YU 501 A 1 HETATM 4 C C6 6YU . . . B 2 -26.321 99.483 58.781 1 41.05 ? C6 6YU 501 A 1 HETATM 5 C C7 6YU . . . B 2 -27.48 98.756 58.888 1 40.97 ? C7 6YU 501 A 1 HETATM 6 C C8 6YU . . . B 2 -27.399 97.396 59.173 1 41.39 ? C8 6YU 501 A 1 HETATM 7 C C9 6YU . . . B 2 -26.166 96.772 59.357 1 40.77 ? C9 6YU 501 A 1 HETATM 8 N N10 6YU . . . B 2 -23.665 96.915 59.441 1 42.23 ? N10 6YU 501 A 1 HETATM 9 P PA 6YU . . . B 2 -27.188 88.395 59.014 1 44.19 ? PA 6YU 501 A 1 HETATM 10 O O1A 6YU . . . B 2 -28.3 88.836 59.876 1 43.48 ? O1A 6YU 501 A 1 HETATM 11 O O2A 6YU . . . B 2 -26.905 89.441 57.834 1 46.42 ? O2A 6YU 501 A 1 HETATM 12 O O5B 6YU . . . B 2 -27.534 86.964 58.4 1 48.48 ? O5B 6YU 501 A 1 HETATM 13 C C5B 6YU . . . B 2 -28.162 85.929 59.15 1 48.86 ? C5B 6YU 501 A 1 HETATM 14 C C4B 6YU . . . B 2 -29.233 85.246 58.307 1 46.79 ? C4B 6YU 501 A 1 HETATM 15 O O4B 6YU . . . B 2 -29.967 84.421 59.207 1 46.75 ? O4B 6YU 501 A 1 HETATM 16 C C3B 6YU . . . B 2 -30.256 86.23 57.661 1 49.55 ? C3B 6YU 501 A 1 HETATM 17 O O3B 6YU . . . B 2 -30.292 86.051 56.238 1 50.91 ? O3B 6YU 501 A 1 HETATM 18 C C2B 6YU . . . B 2 -31.607 85.856 58.329 1 46.38 ? C2B 6YU 501 A 1 HETATM 19 O O2B 6YU . . . B 2 -32.703 85.912 57.416 1 47.5 ? O2B 6YU 501 A 1 HETATM 20 C C1B 6YU . . . B 2 -31.31 84.404 58.743 1 50.31 ? C1B 6YU 501 A 1 HETATM 21 N N9A 6YU . . . B 2 -32.167 83.872 59.801 1 52.55 ? N9A 6YU 501 A 1 HETATM 22 C C8A 6YU . . . B 2 -32.654 84.503 60.908 1 52.2 ? C8A 6YU 501 A 1 HETATM 23 N N7A 6YU . . . B 2 -33.372 83.698 61.613 1 51.68 ? N7A 6YU 501 A 1 HETATM 24 C C5A 6YU . . . B 2 -33.39 82.496 60.999 1 53.49 ? C5A 6YU 501 A 1 HETATM 25 C C6A 6YU . . . B 2 -33.984 81.265 61.284 1 50.59 ? C6A 6YU 501 A 1 HETATM 26 N N6A 6YU . . . B 2 -34.748 81.114 62.42 1 46.04 ? N6A 6YU 501 A 1 HETATM 27 N N1A 6YU . . . B 2 -33.778 80.256 60.44 1 57.15 ? N1A 6YU 501 A 1 HETATM 28 C C2A 6YU . . . B 2 -33.04 80.395 59.344 1 56.88 ? C2A 6YU 501 A 1 HETATM 29 N N3A 6YU . . . B 2 -32.461 81.531 59.032 1 55.25 ? N3A 6YU 501 A 1 HETATM 30 C C4A 6YU . . . B 2 -32.612 82.589 59.83 1 54.88 ? C4A 6YU 501 A 1 HETATM 31 N N1 6YU . . . B 2 -21.599 96.83 58.268 1 47.52 ? N1 6YU 501 A 1 HETATM 32 O O2 6YU . . . B 2 -19.777 96.66 57.128 1 51.2 ? O2 6YU 501 A 1 HETATM 33 N N3 6YU . . . B 2 -20.853 98.612 56.988 1 49.38 ? N3 6YU 501 A 1 HETATM 34 O O4 6YU . . . B 2 -22.012 100.512 56.969 1 54.76 ? O4 6YU 501 A 1 HETATM 35 C C4X 6YU . . . B 2 -22.813 98.853 58.321 1 47.3 ? C4X 6YU 501 A 1 HETATM 36 C C5X 6YU . . . B 2 -25.092 98.875 58.966 1 45.61 ? C5X 6YU 501 A 1 HETATM 37 C C7M 6YU . . . B 2 -28.755 99.538 58.663 1 41.61 ? C7M 6YU 501 A 1 HETATM 38 C C8M 6YU . . . B 2 -28.636 96.556 59.288 1 45.46 ? C8M 6YU 501 A 1 HETATM 39 C C9A 6YU . . . B 2 -24.974 97.497 59.292 1 42.13 ? C9A 6YU 501 A 1 HETATM 40 C C10 6YU . . . B 2 -22.663 97.539 58.737 1 43.77 ? C10 6YU 501 A 1 HETATM 41 C C1' 6YU . . . B 2 -23.47 95.597 60.052 1 46.76 ? C1' 6YU 501 A 1 HETATM 42 C C2' 6YU . . . B 2 -23.549 94.45 59.016 1 46.84 ? C2' 6YU 501 A 1 HETATM 43 O O2' 6YU . . . B 2 -24.572 94.665 58.056 1 42.59 ? O2' 6YU 501 A 1 HETATM 44 C C3' 6YU . . . B 2 -23.805 93.118 59.725 1 45.47 ? C3' 6YU 501 A 1 HETATM 45 O O3' 6YU . . . B 2 -22.804 92.967 60.727 1 54.06 ? O3' 6YU 501 A 1 HETATM 46 C C4' 6YU . . . B 2 -23.624 91.91 58.793 1 46.13 ? C4' 6YU 501 A 1 HETATM 47 O O4' 6YU . . . B 2 -24.172 92.092 57.47 1 40.21 ? O4' 6YU 501 A 1 HETATM 48 C C5' 6YU . . . B 2 -24.296 90.734 59.492 1 43.68 ? C5' 6YU 501 A 1 HETATM 49 O O5' 6YU . . . B 2 -23.878 89.509 58.904 1 46.57 ? O5' 6YU 501 A 1 HETATM 50 P P 6YU . . . B 2 -24.355 88.118 59.535 1 45.71 ? P 6YU 501 A 1 HETATM 51 O O1P 6YU . . . B 2 -24.118 87.009 58.581 1 47.22 ? O1P 6YU 501 A 1 HETATM 52 O O2P 6YU . . . B 2 -23.549 87.927 60.908 1 51.26 ? O2P 6YU 501 A 1 HETATM 53 O O3P 6YU . . . B 2 -25.887 88.273 59.9 1 38.94 ? O3P 6YU 501 A 1 HETATM 54 C C1N 6YU . . . B 2 -20.324 113.152 58.291 0 92.85 ? C1N 6YU 501 A 1 HETATM 55 C C2N 6YU . . . B 2 -20.995 112.095 58.67 0 91.21 ? C2N 6YU 501 A 1 HETATM 56 C C3N 6YU . . . B 2 -21.646 111.046 59.102 0 89.64 ? C3N 6YU 501 A 1 HETATM 57 C C4N 6YU . . . B 2 -21.193 109.664 58.705 0 89.05 ? C4N 6YU 501 A 1 HETATM 58 N N5N 6YU . . . B 2 -20.915 108.874 59.912 0 88.56 ? N5N 6YU 501 A 1 HETATM 59 C C6N 6YU . . . B 2 -19.968 107.789 59.622 0 88.96 ? C6N 6YU 501 A 1 HETATM 60 C C7N 6YU . . . B 2 -20.179 106.647 60.619 0 88 ? C7N 6YU 501 A 1 HETATM 61 C C8N 6YU . . . B 2 -20.368 105.334 59.857 0 87.29 ? C8N 6YU 501 A 1 HETATM 62 C C9N 6YU . . . B 2 -20.128 104.144 60.802 1 84.48 ? C9N 6YU 501 A 1 HETATM 63 N NN1 6YU . . . B 2 -20.652 102.917 60.191 1 82.65 ? NN1 6YU 501 A 1 HETATM 64 C CN1 6YU . . . B 2 -21.915 102.567 60.313 1 74.99 ? CN1 6YU 501 A 1 HETATM 65 C CN2 6YU . . . B 2 -22.337 101.367 59.669 1 63.92 ? CN2 6YU 501 A 1 HETATM 66 C CN3 6YU . . . B 2 -23.606 100.798 59.612 1 58.76 ? CN3 6YU 501 A 1 HETATM 67 C CN4 6YU . . . B 2 -24.637 101.581 60.422 1 61.42 ? CN4 6YU 501 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 67 #