data_7OY6 # _model_server_result.job_id -nqcgNzmNTS394Wsasj6eQ _model_server_result.datetime_utc '2024-11-27 00:24:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oy6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7OY6 # _exptl.entry_id 7OY6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.451 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}4-(3-cyclopropyl-1~{H}-pyrazol-5-yl)-~{N}2-(phenylmethyl)thieno[3,2-d]pyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7OY6 _cell.length_a 93.65 _cell.length_b 93.65 _cell.length_c 48.96 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OY6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 194 C GLN 320 1_555 A N PTR 195 C PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale2 A C PTR 195 C PTR 321 1_555 A N ILE 196 C ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C19 H18 N6 S' _chem_comp.formula_weight 362.451 _chem_comp.id 39I _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}4-(3-cyclopropyl-1~{H}-pyrazol-5-yl)-~{N}2-(phenylmethyl)thieno[3,2-d]pyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N5 N4 39I sing 1 n y N5 C9 39I doub 2 n y N4 C11 39I sing 3 n y C9 C7 39I sing 4 n n C9 C10 39I sing 5 n y C11 N3 39I sing 6 n n C11 C10 39I doub 7 n y N3 C5 39I sing 8 n n C6 C7 39I sing 9 n n C6 C8 39I sing 10 n n C7 C8 39I sing 11 n n S C2 39I sing 12 n y S C3 39I sing 13 n y C5 C2 39I doub 14 n y C5 N2 39I sing 15 n y C2 C1 39I sing 16 n y C3 C4 39I doub 17 n y N2 C 39I doub 18 n y C1 C4 39I sing 19 n y C1 N1 39I doub 20 n y C14 C15 39I doub 21 n y C14 C16 39I sing 22 n y C15 C13 39I sing 23 n y C N1 39I sing 24 n y C N 39I sing 25 n n C16 C18 39I doub 26 n y C13 C12 39I sing 27 n n C13 C17 39I doub 28 n y C12 N 39I sing 29 n n C18 C17 39I sing 30 n y C18 H1 39I sing 31 n n C16 H2 39I sing 32 n n C14 H3 39I sing 33 n n C15 H4 39I sing 34 n n C17 H5 39I sing 35 n n C12 H6 39I sing 36 n n C12 H7 39I sing 37 n n N H8 39I sing 38 n n C3 H9 39I sing 39 n n C4 H10 39I sing 40 n n N3 H11 39I sing 41 n n C10 H12 39I sing 42 n n N4 H13 39I sing 43 n n C7 H14 39I sing 44 n n C8 H15 39I sing 45 n n C8 H16 39I sing 46 n n C6 H17 39I sing 47 n n C6 H18 39I sing 48 n n # _atom_sites.entry_id 7OY6 _atom_sites.fract_transf_matrix[1][1] 0.010678 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010678 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020425 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 39I C 1 501 1 39I sdf . C 3 HOH C 1 601 1 HOH HOH . C 3 HOH C 2 602 15 HOH HOH . C 3 HOH C 3 603 3 HOH HOH . C 3 HOH C 4 604 9 HOH HOH . C 3 HOH C 5 605 29 HOH HOH . C 3 HOH C 6 606 4 HOH HOH . C 3 HOH C 7 607 4 HOH HOH . C 3 HOH C 8 608 2 HOH HOH . C 3 HOH C 9 609 5 HOH HOH . C 3 HOH C 10 610 10 HOH HOH . C 3 HOH C 11 611 2 HOH HOH . C 3 HOH C 12 612 15 HOH HOH . C 3 HOH C 13 613 8 HOH HOH . C 3 HOH C 14 614 7 HOH HOH . C 3 HOH C 15 615 24 HOH HOH . C 3 HOH C 16 616 4 HOH HOH . C 3 HOH C 17 617 5 HOH HOH . C 3 HOH C 18 618 11 HOH HOH . C 3 HOH C 19 619 6 HOH HOH . C 3 HOH C 20 620 12 HOH HOH . C 3 HOH C 21 621 9 HOH HOH . C 3 HOH C 22 622 14 HOH HOH . C 3 HOH C 23 623 10 HOH HOH . C 3 HOH C 24 624 12 HOH HOH . C 3 HOH C 25 625 50 HOH HOH . C 3 HOH C 26 626 30 HOH HOH . C 3 HOH C 27 627 13 HOH HOH . C 3 HOH C 28 628 82 HOH HOH . C 3 HOH C 29 629 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 39I . . . B 2 -3.414 34.474 14.942 1 99.47 ? C18 39I 501 C 1 HETATM 2 C C16 39I . . . B 2 -4.389 34.45 15.948 1 97.35 ? C16 39I 501 C 1 HETATM 3 C C14 39I . . . B 2 -5.206 33.316 16.107 1 95.56 ? C14 39I 501 C 1 HETATM 4 C C15 39I . . . B 2 -5.062 32.212 15.276 1 84.65 ? C15 39I 501 C 1 HETATM 5 C C17 39I . . . B 2 -3.265 33.368 14.092 1 99.17 ? C17 39I 501 C 1 HETATM 6 C C13 39I . . . B 2 -4.095 32.251 14.249 1 96.16 ? C13 39I 501 C 1 HETATM 7 C C12 39I . . . B 2 -3.867 31.039 13.386 1 87.37 ? C12 39I 501 C 1 HETATM 8 N N 39I . . . B 2 -3.403 30.123 14.433 1 86.69 ? N 39I 501 C 1 HETATM 9 C C 39I . . . B 2 -4.155 29.186 15.105 1 93.12 ? C 39I 501 C 1 HETATM 10 N N2 39I . . . B 2 -5.473 29.029 14.773 1 98.36 ? N2 39I 501 C 1 HETATM 11 C C5 39I . . . B 2 -6.326 28.148 15.352 1 78.21 ? C5 39I 501 C 1 HETATM 12 C C2 39I . . . B 2 -5.781 27.28 16.372 1 92.44 ? C2 39I 501 C 1 HETATM 13 S S 39I . . . B 2 -6.555 26.068 17.23 1 86.35 ? S 39I 501 C 1 HETATM 14 C C3 39I . . . B 2 -5.117 25.721 18.181 1 87.24 ? C3 39I 501 C 1 HETATM 15 C C4 39I . . . B 2 -4.026 26.526 17.814 1 93.32 ? C4 39I 501 C 1 HETATM 16 C C1 39I . . . B 2 -4.372 27.455 16.745 1 101.3 ? C1 39I 501 C 1 HETATM 17 N N1 39I . . . B 2 -3.595 28.401 16.096 1 89.47 ? N1 39I 501 C 1 HETATM 18 N N3 39I . . . B 2 -7.594 27.971 15.012 1 71.07 ? N3 39I 501 C 1 HETATM 19 C C11 39I . . . B 2 -8.052 28.508 13.87 1 65.77 ? C11 39I 501 C 1 HETATM 20 C C10 39I . . . B 2 -7.661 29.516 12.999 1 59.1 ? C10 39I 501 C 1 HETATM 21 N N4 39I . . . B 2 -9.033 27.828 13.332 1 54.58 ? N4 39I 501 C 1 HETATM 22 N N5 39I . . . B 2 -9.373 28.345 12.085 1 55.1 ? N5 39I 501 C 1 HETATM 23 C C9 39I . . . B 2 -8.517 29.386 11.922 1 58.09 ? C9 39I 501 C 1 HETATM 24 C C7 39I . . . B 2 -8.383 30.376 10.811 1 56.34 ? C7 39I 501 C 1 HETATM 25 C C8 39I . . . B 2 -8.619 31.719 11.519 1 55.2 ? C8 39I 501 C 1 HETATM 26 C C6 39I . . . B 2 -7.33 31.48 10.747 1 59.34 ? C6 39I 501 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 26 #