data_7OYE # _model_server_result.job_id ezFJJHSp_pGCGym5CNr9Tw _model_server_result.datetime_utc '2024-12-27 16:25:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7oye # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 7OYE # _exptl.entry_id 7OYE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.42 _cell.angle_gamma 90 _cell.entry_id 7OYE _cell.length_a 48.02 _cell.length_b 38.03 _cell.length_c 62.51 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OYE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 239 n n C10 C9 OLC doub 240 n n C10 C11 OLC sing 241 n n C9 C8 OLC sing 242 n n C17 C16 OLC sing 243 z n C11 C12 OLC sing 244 n n C8 C7 OLC sing 245 n n C24 C22 OLC sing 246 n n C24 O25 OLC sing 247 n n C16 C15 OLC sing 248 n n C12 C13 OLC sing 249 n n C7 C6 OLC sing 250 n n C15 C14 OLC sing 251 n n C13 C14 OLC sing 252 n n C6 C5 OLC sing 253 n n C5 C4 OLC sing 254 n n C4 C3 OLC sing 255 n n C3 C2 OLC sing 256 n n C2 C1 OLC sing 257 n n C21 C22 OLC sing 258 n n C21 O20 OLC sing 259 n n C1 O19 OLC doub 260 n n C1 O20 OLC sing 261 n n C22 O23 OLC sing 262 n n C18 H18 OLC sing 263 n n C18 H18A OLC sing 264 n n C18 H18B OLC sing 265 n n C10 H10 OLC sing 266 n n C9 H9 OLC sing 267 n n C17 H17 OLC sing 268 n n C17 H17A OLC sing 269 n n C11 H11 OLC sing 270 n n C11 H11A OLC sing 271 n n C8 H8 OLC sing 272 n n C8 H8A OLC sing 273 n n C24 H24 OLC sing 274 n n C24 H24A OLC sing 275 n n C16 H16 OLC sing 276 n n C16 H16A OLC sing 277 n n C12 H12 OLC sing 278 n n C12 H12A OLC sing 279 n n C7 H7 OLC sing 280 n n C7 H7A OLC sing 281 n n C15 H15 OLC sing 282 n n C15 H15A OLC sing 283 n n C13 H13 OLC sing 284 n n C13 H13A OLC sing 285 n n C6 H6 OLC sing 286 n n C6 H6A OLC sing 287 n n C14 H14 OLC sing 288 n n C14 H14A OLC sing 289 n n C5 H5 OLC sing 290 n n C5 H5A OLC sing 291 n n C4 H4 OLC sing 292 n n C4 H4A OLC sing 293 n n C3 H3 OLC sing 294 n n C3 H3A OLC sing 295 n n C2 H2 OLC sing 296 n n C2 H2A OLC sing 297 n n C21 H21 OLC sing 298 n n C21 H21A OLC sing 299 n n C22 H22 OLC sing 300 n n O25 HO25 OLC sing 301 n n O23 HO23 OLC sing 302 n n # _atom_sites.entry_id 7OYE _atom_sites.fract_transf_matrix[1][1] 0.020825 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001976 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 OLC A 1 301 301 OLC OLC . D 3 OLC A 1 302 401 OLC OLC . E 3 OLC A 1 303 601 OLC OLC . F 3 OLC A 1 304 701 OLC OLC . G 3 OLC A 1 305 801 OLC OLC . H 4 CO2 B 1 901 901 CO2 CO2 . I 5 HOH A 1 401 43 HOH HOH . I 5 HOH A 2 402 21 HOH HOH . I 5 HOH A 3 403 10 HOH HOH . I 5 HOH A 4 404 30 HOH HOH . I 5 HOH A 5 405 5 HOH HOH . I 5 HOH A 6 406 46 HOH HOH . I 5 HOH A 7 407 9 HOH HOH . I 5 HOH A 8 408 8 HOH HOH . I 5 HOH A 9 409 31 HOH HOH . I 5 HOH A 10 410 39 HOH HOH . I 5 HOH A 11 411 6 HOH HOH . I 5 HOH A 12 412 7 HOH HOH . I 5 HOH A 13 413 23 HOH HOH . I 5 HOH A 14 414 4 HOH HOH . I 5 HOH A 15 415 37 HOH HOH . I 5 HOH A 16 416 16 HOH HOH . I 5 HOH A 17 417 3 HOH HOH . I 5 HOH A 18 418 1 HOH HOH . I 5 HOH A 19 419 4 HOH HOH . I 5 HOH A 20 420 13 HOH HOH . I 5 HOH A 21 421 29 HOH HOH . I 5 HOH A 22 422 47 HOH HOH . I 5 HOH A 23 423 42 HOH HOH . I 5 HOH A 24 424 29 HOH HOH . I 5 HOH A 25 425 26 HOH HOH . I 5 HOH A 26 426 19 HOH HOH . I 5 HOH A 27 427 27 HOH HOH . I 5 HOH A 28 428 41 HOH HOH . I 5 HOH A 29 429 34 HOH HOH . I 5 HOH A 30 430 45 HOH HOH . I 5 HOH A 31 431 44 HOH HOH . I 5 HOH A 32 432 25 HOH HOH . I 5 HOH A 33 433 5 HOH HOH . I 5 HOH A 34 434 28 HOH HOH . I 5 HOH A 35 435 6 HOH HOH . I 5 HOH A 36 436 7 HOH HOH . I 5 HOH A 37 437 22 HOH HOH . I 5 HOH A 38 438 9 HOH HOH . I 5 HOH A 39 439 24 HOH HOH . I 5 HOH A 40 440 3 HOH HOH . I 5 HOH A 41 441 8 HOH HOH . I 5 HOH A 42 442 18 HOH HOH . I 5 HOH A 43 443 12 HOH HOH . I 5 HOH A 44 444 23 HOH HOH . I 5 HOH A 45 445 17 HOH HOH . I 5 HOH A 46 446 30 HOH HOH . I 5 HOH A 47 447 33 HOH HOH . I 5 HOH A 48 448 32 HOH HOH . I 5 HOH A 49 449 10 HOH HOH . I 5 HOH A 50 450 20 HOH HOH . I 5 HOH A 51 451 15 HOH HOH . I 5 HOH A 52 452 40 HOH HOH . I 5 HOH A 53 453 36 HOH HOH . I 5 HOH A 54 454 38 HOH HOH . I 5 HOH A 55 455 14 HOH HOH . I 5 HOH A 56 456 2 HOH HOH . I 5 HOH A 57 457 11 HOH HOH . I 5 HOH A 58 458 31 HOH HOH . I 5 HOH A 59 459 26 HOH HOH . J 5 HOH B 1 1001 1 HOH HOH . J 5 HOH B 2 1002 35 HOH HOH . J 5 HOH B 3 1003 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . F 3 40.422 44.313 61.578 1 91.48 ? C18 OLC 304 A 1 HETATM 2 C C10 OLC . . . F 3 48.412 41.76 60.65 1 94.09 ? C10 OLC 304 A 1 HETATM 3 C C9 OLC . . . F 3 48.545 42.547 59.549 1 94.28 ? C9 OLC 304 A 1 HETATM 4 C C17 OLC . . . F 3 41.557 43.669 62.356 1 91.66 ? C17 OLC 304 A 1 HETATM 5 C C11 OLC . . . F 3 48.262 42.207 62.081 1 93.69 ? C11 OLC 304 A 1 HETATM 6 C C8 OLC . . . F 3 48.568 44.059 59.488 1 94.23 ? C8 OLC 304 A 1 HETATM 7 C C24 OLC . . . F 3 54.069 52.101 56.624 1 93.54 ? C24 OLC 304 A 1 HETATM 8 C C16 OLC . . . F 3 42.782 44.579 62.307 1 92 ? C16 OLC 304 A 1 HETATM 9 C C12 OLC . . . F 3 46.789 42.522 62.374 1 93.35 ? C12 OLC 304 A 1 HETATM 10 C C7 OLC . . . F 3 49.863 44.54 58.827 1 94.05 ? C7 OLC 304 A 1 HETATM 11 C C15 OLC . . . F 3 44.065 43.809 62.663 1 92.34 ? C15 OLC 304 A 1 HETATM 12 C C13 OLC . . . F 3 46.622 44.002 62.78 1 92.92 ? C13 OLC 304 A 1 HETATM 13 C C6 OLC . . . F 3 50.916 44.926 59.872 1 93.93 ? C6 OLC 304 A 1 HETATM 14 C C14 OLC . . . F 3 45.317 44.61 62.232 1 92.5 ? C14 OLC 304 A 1 HETATM 15 C C5 OLC . . . F 3 51.154 46.432 59.795 1 94 ? C5 OLC 304 A 1 HETATM 16 C C4 OLC . . . F 3 50.284 47.202 60.806 1 94.27 ? C4 OLC 304 A 1 HETATM 17 C C3 OLC . . . F 3 50.277 48.73 60.537 1 94.53 ? C3 OLC 304 A 1 HETATM 18 C C2 OLC . . . F 3 51.703 49.334 60.45 1 94.58 ? C2 OLC 304 A 1 HETATM 19 C C21 OLC . . . F 3 53.644 50.561 58.649 1 94.09 ? C21 OLC 304 A 1 HETATM 20 C C1 OLC . . . F 3 51.636 50.828 60.135 1 94.29 ? C1 OLC 304 A 1 HETATM 21 C C22 OLC . . . F 3 54.634 51.592 57.993 1 94.19 ? C22 OLC 304 A 1 HETATM 22 O O19 OLC . . . F 3 50.814 51.614 60.585 1 94.18 ? O19 OLC 304 A 1 HETATM 23 O O25 OLC . . . F 3 55.145 52.733 55.997 1 92.91 ? O25 OLC 304 A 1 HETATM 24 O O23 OLC . . . F 3 54.894 52.64 58.853 1 94.67 ? O23 OLC 304 A 1 HETATM 25 O O20 OLC . . . F 3 52.606 51.333 59.262 1 94.08 ? O20 OLC 304 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #