data_7OZC # _model_server_result.job_id feLqnAgrX3a4lTDz4PdxlA _model_server_result.datetime_utc '2024-11-15 20:42:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ozc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 7OZC # _exptl.entry_id 7OZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.219 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-O-sulfo-beta-D-galactopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.63 _cell.angle_gamma 90 _cell.entry_id 7OZC _cell.length_a 52.15 _cell.length_b 91.76 _cell.length_c 52.68 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7OZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 42 AAA ASP 42 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A OD1 ASP 43 AAA ASP 43 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc3 A OD1 ASP 330 AAA ASP 330 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.702 ? metalc ? metalc4 A OD2 ASP 330 AAA ASP 330 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc5 A OD1 ASN 331 AAA ASN 331 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc6 B O8 G6S . AAA G6S 601 1_555 C CA CA . AAA CA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'C6 H12 O9 S' _chem_comp.formula_weight 260.219 _chem_comp.id G6S _chem_comp.mon_nstd_flag n _chem_comp.name 6-O-sulfo-beta-D-galactopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms D-GALACTOSE-6-SULFATE;6-O-sulfo-beta-D-galactose;6-O-sulfo-D-galactose;6-O-sulfo-galactose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6S sing 83 n n C1 O1 G6S sing 84 n n C1 O5 G6S sing 85 n n C2 C3 G6S sing 86 n n C2 O2 G6S sing 87 n n C3 C4 G6S sing 88 n n C3 O3 G6S sing 89 n n C4 C5 G6S sing 90 n n C4 O4 G6S sing 91 n n C5 C6 G6S sing 92 n n C5 O5 G6S sing 93 n n C6 O6 G6S sing 94 n n O6 S G6S sing 95 n n S O7 G6S doub 96 n n S O8 G6S doub 97 n n S O9 G6S sing 98 n n C1 H1 G6S sing 99 n n C2 H2 G6S sing 100 n n C3 H3 G6S sing 101 n n C4 H4 G6S sing 102 n n C5 H5 G6S sing 103 n n C6 H61 G6S sing 104 n n C6 H62 G6S sing 105 n n O2 HO2 G6S sing 106 n n O4 HO4 G6S sing 107 n n O3 HO3 G6S sing 108 n n O1 HO1 G6S sing 109 n n O9 HO9 G6S sing 110 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version G6S DGalp[6S]b 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 G6S 6-sulfo-b-D-galactopyranose 'COMMON NAME' GMML 1 G6S b-D-Galp6SO3 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 # _atom_sites.entry_id 7OZC _atom_sites.fract_transf_matrix[1][1] 0.019175 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009615 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021235 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 G6S AAA 1 601 601 G6S G6S . C 3 CA AAA 1 602 1 CA CA . D 4 HOH AAA 1 701 106 HOH HOH . D 4 HOH AAA 2 702 105 HOH HOH . D 4 HOH AAA 3 703 144 HOH HOH . D 4 HOH AAA 4 704 186 HOH HOH . D 4 HOH AAA 5 705 153 HOH HOH . D 4 HOH AAA 6 706 138 HOH HOH . D 4 HOH AAA 7 707 169 HOH HOH . D 4 HOH AAA 8 708 94 HOH HOH . D 4 HOH AAA 9 709 65 HOH HOH . D 4 HOH AAA 10 710 66 HOH HOH . D 4 HOH AAA 11 711 83 HOH HOH . D 4 HOH AAA 12 712 102 HOH HOH . D 4 HOH AAA 13 713 70 HOH HOH . D 4 HOH AAA 14 714 179 HOH HOH . D 4 HOH AAA 15 715 47 HOH HOH . D 4 HOH AAA 16 716 78 HOH HOH . D 4 HOH AAA 17 717 127 HOH HOH . D 4 HOH AAA 18 718 148 HOH HOH . D 4 HOH AAA 19 719 7 HOH HOH . D 4 HOH AAA 20 720 171 HOH HOH . D 4 HOH AAA 21 721 141 HOH HOH . D 4 HOH AAA 22 722 184 HOH HOH . D 4 HOH AAA 23 723 12 HOH HOH . D 4 HOH AAA 24 724 82 HOH HOH . D 4 HOH AAA 25 725 50 HOH HOH . D 4 HOH AAA 26 726 68 HOH HOH . D 4 HOH AAA 27 727 15 HOH HOH . D 4 HOH AAA 28 728 154 HOH HOH . D 4 HOH AAA 29 729 9 HOH HOH . D 4 HOH AAA 30 730 177 HOH HOH . D 4 HOH AAA 31 731 164 HOH HOH . D 4 HOH AAA 32 732 103 HOH HOH . D 4 HOH AAA 33 733 38 HOH HOH . D 4 HOH AAA 34 734 112 HOH HOH . D 4 HOH AAA 35 735 133 HOH HOH . D 4 HOH AAA 36 736 81 HOH HOH . D 4 HOH AAA 37 737 21 HOH HOH . D 4 HOH AAA 38 738 131 HOH HOH . D 4 HOH AAA 39 739 10 HOH HOH . D 4 HOH AAA 40 740 37 HOH HOH . D 4 HOH AAA 41 741 117 HOH HOH . D 4 HOH AAA 42 742 58 HOH HOH . D 4 HOH AAA 43 743 16 HOH HOH . D 4 HOH AAA 44 744 104 HOH HOH . D 4 HOH AAA 45 745 27 HOH HOH . D 4 HOH AAA 46 746 168 HOH HOH . D 4 HOH AAA 47 747 90 HOH HOH . D 4 HOH AAA 48 748 165 HOH HOH . D 4 HOH AAA 49 749 110 HOH HOH . D 4 HOH AAA 50 750 45 HOH HOH . D 4 HOH AAA 51 751 111 HOH HOH . D 4 HOH AAA 52 752 29 HOH HOH . D 4 HOH AAA 53 753 91 HOH HOH . D 4 HOH AAA 54 754 98 HOH HOH . D 4 HOH AAA 55 755 135 HOH HOH . D 4 HOH AAA 56 756 35 HOH HOH . D 4 HOH AAA 57 757 123 HOH HOH . D 4 HOH AAA 58 758 107 HOH HOH . D 4 HOH AAA 59 759 33 HOH HOH . D 4 HOH AAA 60 760 174 HOH HOH . D 4 HOH AAA 61 761 52 HOH HOH . D 4 HOH AAA 62 762 18 HOH HOH . D 4 HOH AAA 63 763 143 HOH HOH . D 4 HOH AAA 64 764 76 HOH HOH . D 4 HOH AAA 65 765 157 HOH HOH . D 4 HOH AAA 66 766 99 HOH HOH . D 4 HOH AAA 67 767 34 HOH HOH . D 4 HOH AAA 68 768 128 HOH HOH . D 4 HOH AAA 69 769 180 HOH HOH . D 4 HOH AAA 70 770 162 HOH HOH . D 4 HOH AAA 71 771 185 HOH HOH . D 4 HOH AAA 72 772 96 HOH HOH . D 4 HOH AAA 73 773 13 HOH HOH . D 4 HOH AAA 74 774 193 HOH HOH . D 4 HOH AAA 75 775 151 HOH HOH . D 4 HOH AAA 76 776 42 HOH HOH . D 4 HOH AAA 77 777 48 HOH HOH . D 4 HOH AAA 78 778 4 HOH HOH . D 4 HOH AAA 79 779 2 HOH HOH . D 4 HOH AAA 80 780 77 HOH HOH . D 4 HOH AAA 81 781 43 HOH HOH . D 4 HOH AAA 82 782 28 HOH HOH . D 4 HOH AAA 83 783 149 HOH HOH . D 4 HOH AAA 84 784 61 HOH HOH . D 4 HOH AAA 85 785 155 HOH HOH . D 4 HOH AAA 86 786 89 HOH HOH . D 4 HOH AAA 87 787 44 HOH HOH . D 4 HOH AAA 88 788 20 HOH HOH . D 4 HOH AAA 89 789 84 HOH HOH . D 4 HOH AAA 90 790 74 HOH HOH . D 4 HOH AAA 91 791 125 HOH HOH . D 4 HOH AAA 92 792 160 HOH HOH . D 4 HOH AAA 93 793 39 HOH HOH . D 4 HOH AAA 94 794 97 HOH HOH . D 4 HOH AAA 95 795 49 HOH HOH . D 4 HOH AAA 96 796 19 HOH HOH . D 4 HOH AAA 97 797 152 HOH HOH . D 4 HOH AAA 98 798 88 HOH HOH . D 4 HOH AAA 99 799 115 HOH HOH . D 4 HOH AAA 100 800 71 HOH HOH . D 4 HOH AAA 101 801 124 HOH HOH . D 4 HOH AAA 102 802 87 HOH HOH . D 4 HOH AAA 103 803 130 HOH HOH . D 4 HOH AAA 104 804 80 HOH HOH . D 4 HOH AAA 105 805 72 HOH HOH . D 4 HOH AAA 106 806 40 HOH HOH . D 4 HOH AAA 107 807 11 HOH HOH . D 4 HOH AAA 108 808 32 HOH HOH . D 4 HOH AAA 109 809 22 HOH HOH . D 4 HOH AAA 110 810 156 HOH HOH . D 4 HOH AAA 111 811 119 HOH HOH . D 4 HOH AAA 112 812 158 HOH HOH . D 4 HOH AAA 113 813 150 HOH HOH . D 4 HOH AAA 114 814 26 HOH HOH . D 4 HOH AAA 115 815 57 HOH HOH . D 4 HOH AAA 116 816 187 HOH HOH . D 4 HOH AAA 117 817 53 HOH HOH . D 4 HOH AAA 118 818 132 HOH HOH . D 4 HOH AAA 119 819 36 HOH HOH . D 4 HOH AAA 120 820 142 HOH HOH . D 4 HOH AAA 121 821 192 HOH HOH . D 4 HOH AAA 122 822 188 HOH HOH . D 4 HOH AAA 123 823 8 HOH HOH . D 4 HOH AAA 124 824 166 HOH HOH . D 4 HOH AAA 125 825 191 HOH HOH . D 4 HOH AAA 126 826 46 HOH HOH . D 4 HOH AAA 127 827 121 HOH HOH . D 4 HOH AAA 128 828 51 HOH HOH . D 4 HOH AAA 129 829 118 HOH HOH . D 4 HOH AAA 130 830 170 HOH HOH . D 4 HOH AAA 131 831 30 HOH HOH . D 4 HOH AAA 132 832 55 HOH HOH . D 4 HOH AAA 133 833 75 HOH HOH . D 4 HOH AAA 134 834 113 HOH HOH . D 4 HOH AAA 135 835 139 HOH HOH . D 4 HOH AAA 136 836 5 HOH HOH . D 4 HOH AAA 137 837 134 HOH HOH . D 4 HOH AAA 138 838 172 HOH HOH . D 4 HOH AAA 139 839 116 HOH HOH . D 4 HOH AAA 140 840 173 HOH HOH . D 4 HOH AAA 141 841 140 HOH HOH . D 4 HOH AAA 142 842 122 HOH HOH . D 4 HOH AAA 143 843 25 HOH HOH . D 4 HOH AAA 144 844 79 HOH HOH . D 4 HOH AAA 145 845 178 HOH HOH . D 4 HOH AAA 146 846 86 HOH HOH . D 4 HOH AAA 147 847 14 HOH HOH . D 4 HOH AAA 148 848 54 HOH HOH . D 4 HOH AAA 149 849 175 HOH HOH . D 4 HOH AAA 150 850 100 HOH HOH . D 4 HOH AAA 151 851 64 HOH HOH . D 4 HOH AAA 152 852 92 HOH HOH . D 4 HOH AAA 153 853 159 HOH HOH . D 4 HOH AAA 154 854 85 HOH HOH . D 4 HOH AAA 155 855 147 HOH HOH . D 4 HOH AAA 156 856 181 HOH HOH . D 4 HOH AAA 157 857 126 HOH HOH . D 4 HOH AAA 158 858 114 HOH HOH . D 4 HOH AAA 159 859 69 HOH HOH . D 4 HOH AAA 160 860 183 HOH HOH . D 4 HOH AAA 161 861 59 HOH HOH . D 4 HOH AAA 162 862 93 HOH HOH . D 4 HOH AAA 163 863 120 HOH HOH . D 4 HOH AAA 164 864 95 HOH HOH . D 4 HOH AAA 165 865 31 HOH HOH . D 4 HOH AAA 166 866 24 HOH HOH . D 4 HOH AAA 167 867 6 HOH HOH . D 4 HOH AAA 168 868 23 HOH HOH . D 4 HOH AAA 169 869 167 HOH HOH . D 4 HOH AAA 170 870 190 HOH HOH . D 4 HOH AAA 171 871 56 HOH HOH . D 4 HOH AAA 172 872 73 HOH HOH . D 4 HOH AAA 173 873 129 HOH HOH . D 4 HOH AAA 174 874 163 HOH HOH . D 4 HOH AAA 175 875 146 HOH HOH . D 4 HOH AAA 176 876 3 HOH HOH . D 4 HOH AAA 177 877 62 HOH HOH . D 4 HOH AAA 178 878 63 HOH HOH . D 4 HOH AAA 179 879 189 HOH HOH . D 4 HOH AAA 180 880 137 HOH HOH . D 4 HOH AAA 181 881 182 HOH HOH . D 4 HOH AAA 182 882 101 HOH HOH . D 4 HOH AAA 183 883 145 HOH HOH . D 4 HOH AAA 184 884 136 HOH HOH . D 4 HOH AAA 185 885 109 HOH HOH . D 4 HOH AAA 186 886 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6S . . . B 2 18.207 -1.266 19.882 1 21.4 0 C1 G6S 601 AAA 1 HETATM 2 C C2 G6S . . . B 2 18.354 -2.804 19.999 1 21.61 0 C2 G6S 601 AAA 1 HETATM 3 C C3 G6S . . . B 2 17.144 -3.51 19.355 1 21.53 0 C3 G6S 601 AAA 1 HETATM 4 C C4 G6S . . . B 2 15.802 -2.991 19.907 1 20.26 0 C4 G6S 601 AAA 1 HETATM 5 C C5 G6S . . . B 2 15.822 -1.452 19.726 1 21.66 0 C5 G6S 601 AAA 1 HETATM 6 C C6 G6S . . . B 2 14.548 -0.804 20.212 1 22.39 0 C6 G6S 601 AAA 1 HETATM 7 O O1 G6S . . . B 2 19.204 -0.643 20.673 1 19.77 0 O1 G6S 601 AAA 1 HETATM 8 O O2 G6S . . . B 2 19.559 -3.216 19.384 1 20.75 0 O2 G6S 601 AAA 1 HETATM 9 O O4 G6S . . . B 2 15.497 -3.338 21.299 1 19.65 0 O4 G6S 601 AAA 1 HETATM 10 O O5 G6S . . . B 2 16.92 -0.843 20.365 1 20.16 0 O5 G6S 601 AAA 1 HETATM 11 O O6 G6S . . . B 2 13.419 -1.173 19.398 1 22.65 0 O6 G6S 601 AAA 1 HETATM 12 S S G6S . . . B 2 12.087 -0.363 19.569 1 21.35 0 S G6S 601 AAA 1 HETATM 13 O O7 G6S . . . B 2 12.389 0.998 19.084 1 19.45 0 O7 G6S 601 AAA 1 HETATM 14 O O8 G6S . . . B 2 11.196 -1.091 18.675 1 21.05 0 O8 G6S 601 AAA 1 HETATM 15 O O9 G6S . . . B 2 11.673 -0.386 20.995 1 22.16 0 O9 G6S 601 AAA 1 HETATM 16 O O3 G6S . . . B 2 17.223 -4.935 19.531 1 20.13 0 O3 G6S 601 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #