data_7P0O # _model_server_result.job_id 85ySXk_K0MXkGEo95yaCPQ _model_server_result.datetime_utc '2024-11-26 05:29:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p0o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":202}' # _entry.id 7P0O # _exptl.entry_id 7P0O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.456 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-benzamido-4-[(2~{R})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P0O _cell.length_a 45.152 _cell.length_b 49.962 _cell.length_c 58.945 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P0O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 40 A CYS 72 1_555 C FE1 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc2 A SG CYS 42 A CYS 74 1_555 C FE1 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc3 A SG CYS 51 A CYS 83 1_555 C FE2 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc4 A ND1 HIS 55 A HIS 87 1_555 C FE2 FES . A FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc5 B SG CYS 40 B CYS 72 1_555 D FE1 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc6 B SG CYS 42 B CYS 74 1_555 D FE1 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc7 B SG CYS 51 B CYS 83 1_555 D FE2 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc8 B ND1 HIS 55 B HIS 87 1_555 D FE2 FES . B FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? # _chem_comp.formula 'C22 H19 N O3 S' _chem_comp.formula_weight 377.456 _chem_comp.id 49I _chem_comp.mon_nstd_flag . _chem_comp.name '2-benzamido-4-[(2~{R})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C20 49I doub 1 n y C21 C22 49I sing 2 n y C20 C19 49I sing 3 n y C22 C17 49I doub 4 n y C19 C18 49I doub 5 n y C17 C18 49I sing 6 n y C17 C16 49I sing 7 n n O2 C15 49I doub 8 n n C16 N1 49I sing 9 n n C16 O3 49I doub 10 n n N1 C13 49I sing 11 n n C15 O1 49I sing 12 n n C15 C14 49I sing 13 n n C13 C14 49I doub 14 n y C13 S1 49I sing 15 n y C14 C11 49I sing 16 n y S1 C12 49I sing 17 n y C11 C12 49I doub 18 n y C11 C8 49I sing 19 n n C7 C8 49I sing 20 n n C7 C2 49I sing 21 n n C1 C2 49I doub 22 n y C1 C6 49I sing 23 n y C8 C9 49I sing 24 n n C2 C3 49I sing 25 n y C6 C5 49I doub 26 n y C9 C10 49I sing 27 n n C3 C10 49I sing 28 n n C3 C4 49I doub 29 n y C5 C4 49I sing 30 n y C1 H1 49I sing 31 n n C5 H2 49I sing 32 n n C4 H3 49I sing 33 n n C6 H4 49I sing 34 n n C7 H5 49I sing 35 n n C7 H6 49I sing 36 n n C8 H7 49I sing 37 n n O1 H8 49I sing 38 n n C18 H9 49I sing 39 n n C19 H10 49I sing 40 n n C20 H11 49I sing 41 n n C21 H12 49I sing 42 n n C22 H13 49I sing 43 n n N1 H14 49I sing 44 n n C12 H15 49I sing 45 n n C9 H16 49I sing 46 n n C9 H17 49I sing 47 n n C10 H18 49I sing 48 n n C10 H19 49I sing 49 n n # _atom_sites.entry_id 7P0O _atom_sites.fract_transf_matrix[1][1] 0.022147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FES A 1 200 200 FES FES . D 2 FES B 1 201 200 FES FES . E 3 49I B 1 202 901 49I 295 . F 4 4OY B 1 203 901 4OY 295 . G 5 HOH A 1 301 31 HOH HOH . G 5 HOH A 2 302 4 HOH HOH . G 5 HOH A 3 303 15 HOH HOH . G 5 HOH A 4 304 28 HOH HOH . G 5 HOH A 5 305 8 HOH HOH . G 5 HOH A 6 306 17 HOH HOH . G 5 HOH A 7 307 43 HOH HOH . G 5 HOH A 8 308 14 HOH HOH . G 5 HOH A 9 309 22 HOH HOH . G 5 HOH A 10 310 12 HOH HOH . G 5 HOH A 11 311 20 HOH HOH . G 5 HOH A 12 312 1 HOH HOH . G 5 HOH A 13 313 3 HOH HOH . G 5 HOH A 14 314 21 HOH HOH . G 5 HOH A 15 315 38 HOH HOH . G 5 HOH A 16 316 9 HOH HOH . G 5 HOH A 17 317 6 HOH HOH . G 5 HOH A 18 318 48 HOH HOH . G 5 HOH A 19 319 13 HOH HOH . G 5 HOH A 20 320 33 HOH HOH . G 5 HOH A 21 321 39 HOH HOH . G 5 HOH A 22 322 34 HOH HOH . G 5 HOH A 23 323 46 HOH HOH . G 5 HOH A 24 324 42 HOH HOH . G 5 HOH A 25 325 49 HOH HOH . H 5 HOH B 1 301 36 HOH HOH . H 5 HOH B 2 302 25 HOH HOH . H 5 HOH B 3 303 41 HOH HOH . H 5 HOH B 4 304 50 HOH HOH . H 5 HOH B 5 305 32 HOH HOH . H 5 HOH B 6 306 5 HOH HOH . H 5 HOH B 7 307 27 HOH HOH . H 5 HOH B 8 308 24 HOH HOH . H 5 HOH B 9 309 44 HOH HOH . H 5 HOH B 10 310 2 HOH HOH . H 5 HOH B 11 311 10 HOH HOH . H 5 HOH B 12 312 19 HOH HOH . H 5 HOH B 13 313 23 HOH HOH . H 5 HOH B 14 314 7 HOH HOH . H 5 HOH B 15 315 16 HOH HOH . H 5 HOH B 16 316 40 HOH HOH . H 5 HOH B 17 317 51 HOH HOH . H 5 HOH B 18 318 29 HOH HOH . H 5 HOH B 19 319 18 HOH HOH . H 5 HOH B 20 320 11 HOH HOH . H 5 HOH B 21 321 30 HOH HOH . H 5 HOH B 22 322 45 HOH HOH . H 5 HOH B 23 323 37 HOH HOH . H 5 HOH B 24 324 35 HOH HOH . H 5 HOH B 25 325 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 49I . . . E 3 2.62 -7.9 17.022 1 76.21 ? C1 49I 202 B 1 HETATM 2 C C5 49I . . . E 3 1.663 -7.309 19.164 1 85.13 ? C5 49I 202 B 1 HETATM 3 C C4 49I . . . E 3 2.921 -7.374 19.76 1 80.92 ? C4 49I 202 B 1 HETATM 4 C C3 49I . . . E 3 4.035 -7.701 18.982 1 83.34 ? C3 49I 202 B 1 HETATM 5 C C2 49I . . . E 3 3.872 -7.947 17.619 1 77.77 ? C2 49I 202 B 1 HETATM 6 C C6 49I . . . E 3 1.521 -7.574 17.799 1 83.45 ? C6 49I 202 B 1 HETATM 7 C C7 49I . . . E 3 5.022 -8.329 16.756 1 67.81 ? C7 49I 202 B 1 HETATM 8 C C8 49I . . . E 3 6.371 -7.871 17.269 1 71.41 ? C8 49I 202 B 1 HETATM 9 O O1 49I . . . E 3 5.411 -10.528 15.079 1 63.95 ? O1 49I 202 B 1 HETATM 10 O O3 49I . . . E 3 11.61 -10.403 14.471 1 71.98 ? O3 49I 202 B 1 HETATM 11 C C16 49I . . . E 3 10.697 -11.043 13.979 1 65.56 ? C16 49I 202 B 1 HETATM 12 C C17 49I . . . E 3 11.041 -12.223 13.115 1 72.28 ? C17 49I 202 B 1 HETATM 13 C C18 49I . . . E 3 12.132 -13.033 13.473 1 79.99 ? C18 49I 202 B 1 HETATM 14 C C19 49I . . . E 3 12.483 -14.138 12.697 1 71.08 ? C19 49I 202 B 1 HETATM 15 C C20 49I . . . E 3 11.737 -14.437 11.56 1 69.74 ? C20 49I 202 B 1 HETATM 16 C C21 49I . . . E 3 10.654 -13.632 11.196 1 66.53 ? C21 49I 202 B 1 HETATM 17 C C22 49I . . . E 3 10.297 -12.527 11.971 1 68.09 ? C22 49I 202 B 1 HETATM 18 N N1 49I . . . E 3 9.416 -10.758 14.212 1 61.71 ? N1 49I 202 B 1 HETATM 19 C C13 49I . . . E 3 9.004 -9.806 15.101 1 63.83 ? C13 49I 202 B 1 HETATM 20 C C14 49I . . . E 3 7.591 -9.64 15.484 1 58.81 ? C14 49I 202 B 1 HETATM 21 C C15 49I . . . E 3 6.595 -10.54 14.842 1 58.38 ? C15 49I 202 B 1 HETATM 22 O O2 49I . . . E 3 7.027 -11.429 13.952 1 50.04 ? O2 49I 202 B 1 HETATM 23 C C11 49I . . . E 3 7.457 -8.53 16.509 1 59.14 ? C11 49I 202 B 1 HETATM 24 C C12 49I . . . E 3 8.679 -7.944 16.844 1 65.34 ? C12 49I 202 B 1 HETATM 25 S S1 49I . . . E 3 9.979 -8.676 15.979 1 70.88 ? S1 49I 202 B 1 HETATM 26 C C9 49I . . . E 3 6.564 -8.144 18.767 1 76.74 ? C9 49I 202 B 1 HETATM 27 C C10 49I . . . E 3 5.387 -7.78 19.666 1 83.62 ? C10 49I 202 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #