data_7P0U # _model_server_result.job_id 3EFC3Fy-dqg3CFoHmaf-aw _model_server_result.datetime_utc '2025-07-03 20:01:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":201}' # _entry.id 7P0U # _exptl.entry_id 7P0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.884 _cell.angle_beta 76.607 _cell.angle_gamma 75.085 _cell.entry_id 7P0U _cell.length_a 46.405 _cell.length_b 57.697 _cell.length_c 65.063 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M,Q,R 1 1 E,F,U,V 1 2 C,D,G,H,N,O,P,S,T,W,X 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 14.850387 55.753115 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 M N N ? 3 N N N ? 3 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7P0U _atom_sites.fract_transf_matrix[1][1] 0.021549 _atom_sites.fract_transf_matrix[1][2] -0.00574 _atom_sites.fract_transf_matrix[1][3] -0.003732 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017936 _atom_sites.fract_transf_matrix[2][3] -0.004977 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 EDO A 1 201 204 EDO EDO . J 3 EDO A 1 202 205 EDO EDO . K 4 GOL A 1 203 206 GOL GOL . L 4 GOL A 1 204 202 GOL GOL . M 3 EDO A 1 205 203 EDO EDO . N 3 EDO B 1 201 201 EDO EDO . O 4 GOL C 1 101 101 GOL GOL . P 3 EDO F 1 201 202 EDO EDO . Q 5 HOH A 1 301 79 HOH HOH . Q 5 HOH A 2 302 7 HOH HOH . Q 5 HOH A 3 303 32 HOH HOH . Q 5 HOH A 4 304 39 HOH HOH . Q 5 HOH A 5 305 42 HOH HOH . Q 5 HOH A 6 306 38 HOH HOH . Q 5 HOH A 7 307 35 HOH HOH . Q 5 HOH A 8 308 33 HOH HOH . Q 5 HOH A 9 309 5 HOH HOH . Q 5 HOH A 10 310 34 HOH HOH . Q 5 HOH A 11 311 73 HOH HOH . Q 5 HOH A 12 312 40 HOH HOH . Q 5 HOH A 13 313 80 HOH HOH . R 5 HOH U 1 101 28 HOH HOH . R 5 HOH U 2 102 4 HOH HOH . R 5 HOH U 3 103 9 HOH HOH . R 5 HOH U 4 104 11 HOH HOH . R 5 HOH U 5 105 13 HOH HOH . S 5 HOH B 1 301 51 HOH HOH . S 5 HOH B 2 302 27 HOH HOH . S 5 HOH B 3 303 47 HOH HOH . S 5 HOH B 4 304 8 HOH HOH . S 5 HOH B 5 305 1 HOH HOH . S 5 HOH B 6 306 74 HOH HOH . S 5 HOH B 7 307 44 HOH HOH . S 5 HOH B 8 308 41 HOH HOH . S 5 HOH B 9 309 48 HOH HOH . S 5 HOH B 10 310 49 HOH HOH . S 5 HOH B 11 311 50 HOH HOH . S 5 HOH B 12 312 77 HOH HOH . S 5 HOH B 13 313 72 HOH HOH . T 5 HOH C 1 201 24 HOH HOH . T 5 HOH C 2 202 20 HOH HOH . T 5 HOH C 3 203 52 HOH HOH . T 5 HOH C 4 204 75 HOH HOH . U 5 HOH D 1 201 14 HOH HOH . U 5 HOH D 2 202 12 HOH HOH . U 5 HOH D 3 203 10 HOH HOH . U 5 HOH D 4 204 15 HOH HOH . U 5 HOH D 5 205 23 HOH HOH . U 5 HOH D 6 206 54 HOH HOH . U 5 HOH D 7 207 71 HOH HOH . U 5 HOH D 8 208 29 HOH HOH . U 5 HOH D 9 209 53 HOH HOH . U 5 HOH D 10 210 61 HOH HOH . U 5 HOH D 11 211 58 HOH HOH . U 5 HOH D 12 212 46 HOH HOH . U 5 HOH D 13 213 76 HOH HOH . U 5 HOH D 14 214 60 HOH HOH . U 5 HOH D 15 215 62 HOH HOH . U 5 HOH D 16 216 55 HOH HOH . V 5 HOH E 1 101 22 HOH HOH . V 5 HOH E 2 102 37 HOH HOH . V 5 HOH E 3 103 2 HOH HOH . V 5 HOH E 4 104 36 HOH HOH . V 5 HOH E 5 105 25 HOH HOH . V 5 HOH E 6 106 18 HOH HOH . V 5 HOH E 7 107 19 HOH HOH . V 5 HOH E 8 108 57 HOH HOH . W 5 HOH F 1 301 21 HOH HOH . W 5 HOH F 2 302 16 HOH HOH . W 5 HOH F 3 303 68 HOH HOH . W 5 HOH F 4 304 66 HOH HOH . W 5 HOH F 5 305 78 HOH HOH . W 5 HOH F 6 306 67 HOH HOH . W 5 HOH F 7 307 31 HOH HOH . W 5 HOH F 8 308 64 HOH HOH . X 5 HOH G 1 101 70 HOH HOH . X 5 HOH G 2 102 26 HOH HOH . X 5 HOH G 3 103 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . N 3 -40.308 -10.825 63.465 1 63.04 ? C1 EDO 201 B 1 HETATM 2 O O1 EDO . . . N 3 -38.93 -10.464 63.601 1 67.71 ? O1 EDO 201 B 1 HETATM 3 C C2 EDO . . . N 3 -40.85 -10.463 62.087 1 58.71 ? C2 EDO 201 B 1 HETATM 4 O O2 EDO . . . N 3 -40.252 -11.321 61.113 1 62.08 ? O2 EDO 201 B 1 HETATM 5 H H11 EDO . . . N 3 -40.893 -10.311 64.23 1 75.76 ? H11 EDO 201 B 1 HETATM 6 H H12 EDO . . . N 3 -40.418 -11.899 63.626 1 75.76 ? H12 EDO 201 B 1 HETATM 7 H HO1 EDO . . . N 3 -38.619 -10.707 64.484 1 81.36 ? HO1 EDO 201 B 1 HETATM 8 H H21 EDO . . . N 3 -40.615 -9.421 61.857 1 70.56 ? H21 EDO 201 B 1 HETATM 9 H H22 EDO . . . N 3 -41.935 -10.582 62.071 1 70.56 ? H22 EDO 201 B 1 HETATM 10 H HO2 EDO . . . N 3 -40.591 -11.097 60.235 1 74.6 ? HO2 EDO 201 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 10 #