data_7P0U # _model_server_result.job_id 7re-0HrEMMucrdiGH34eCg _model_server_result.datetime_utc '2025-07-03 03:02:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p0u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":203}' # _entry.id 7P0U # _exptl.entry_id 7P0U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.884 _cell.angle_beta 76.607 _cell.angle_gamma 75.085 _cell.entry_id 7P0U _cell.length_a 46.405 _cell.length_b 57.697 _cell.length_c 65.063 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P0U _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,J,K,L,M,Q,R 1 1 E,F,U,V 1 2 C,D,G,H,N,O,P,S,T,W,X 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_565 x,y+1,z 1 0 0 0 1 0 0 0 1 14.850387 55.753115 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 K N N ? 4 L N N ? 4 O N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 7P0U _atom_sites.fract_transf_matrix[1][1] 0.021549 _atom_sites.fract_transf_matrix[1][2] -0.00574 _atom_sites.fract_transf_matrix[1][3] -0.003732 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017936 _atom_sites.fract_transf_matrix[2][3] -0.004977 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016396 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 EDO A 1 201 204 EDO EDO . J 3 EDO A 1 202 205 EDO EDO . K 4 GOL A 1 203 206 GOL GOL . L 4 GOL A 1 204 202 GOL GOL . M 3 EDO A 1 205 203 EDO EDO . N 3 EDO B 1 201 201 EDO EDO . O 4 GOL C 1 101 101 GOL GOL . P 3 EDO F 1 201 202 EDO EDO . Q 5 HOH A 1 301 79 HOH HOH . Q 5 HOH A 2 302 7 HOH HOH . Q 5 HOH A 3 303 32 HOH HOH . Q 5 HOH A 4 304 39 HOH HOH . Q 5 HOH A 5 305 42 HOH HOH . Q 5 HOH A 6 306 38 HOH HOH . Q 5 HOH A 7 307 35 HOH HOH . Q 5 HOH A 8 308 33 HOH HOH . Q 5 HOH A 9 309 5 HOH HOH . Q 5 HOH A 10 310 34 HOH HOH . Q 5 HOH A 11 311 73 HOH HOH . Q 5 HOH A 12 312 40 HOH HOH . Q 5 HOH A 13 313 80 HOH HOH . R 5 HOH U 1 101 28 HOH HOH . R 5 HOH U 2 102 4 HOH HOH . R 5 HOH U 3 103 9 HOH HOH . R 5 HOH U 4 104 11 HOH HOH . R 5 HOH U 5 105 13 HOH HOH . S 5 HOH B 1 301 51 HOH HOH . S 5 HOH B 2 302 27 HOH HOH . S 5 HOH B 3 303 47 HOH HOH . S 5 HOH B 4 304 8 HOH HOH . S 5 HOH B 5 305 1 HOH HOH . S 5 HOH B 6 306 74 HOH HOH . S 5 HOH B 7 307 44 HOH HOH . S 5 HOH B 8 308 41 HOH HOH . S 5 HOH B 9 309 48 HOH HOH . S 5 HOH B 10 310 49 HOH HOH . S 5 HOH B 11 311 50 HOH HOH . S 5 HOH B 12 312 77 HOH HOH . S 5 HOH B 13 313 72 HOH HOH . T 5 HOH C 1 201 24 HOH HOH . T 5 HOH C 2 202 20 HOH HOH . T 5 HOH C 3 203 52 HOH HOH . T 5 HOH C 4 204 75 HOH HOH . U 5 HOH D 1 201 14 HOH HOH . U 5 HOH D 2 202 12 HOH HOH . U 5 HOH D 3 203 10 HOH HOH . U 5 HOH D 4 204 15 HOH HOH . U 5 HOH D 5 205 23 HOH HOH . U 5 HOH D 6 206 54 HOH HOH . U 5 HOH D 7 207 71 HOH HOH . U 5 HOH D 8 208 29 HOH HOH . U 5 HOH D 9 209 53 HOH HOH . U 5 HOH D 10 210 61 HOH HOH . U 5 HOH D 11 211 58 HOH HOH . U 5 HOH D 12 212 46 HOH HOH . U 5 HOH D 13 213 76 HOH HOH . U 5 HOH D 14 214 60 HOH HOH . U 5 HOH D 15 215 62 HOH HOH . U 5 HOH D 16 216 55 HOH HOH . V 5 HOH E 1 101 22 HOH HOH . V 5 HOH E 2 102 37 HOH HOH . V 5 HOH E 3 103 2 HOH HOH . V 5 HOH E 4 104 36 HOH HOH . V 5 HOH E 5 105 25 HOH HOH . V 5 HOH E 6 106 18 HOH HOH . V 5 HOH E 7 107 19 HOH HOH . V 5 HOH E 8 108 57 HOH HOH . W 5 HOH F 1 301 21 HOH HOH . W 5 HOH F 2 302 16 HOH HOH . W 5 HOH F 3 303 68 HOH HOH . W 5 HOH F 4 304 66 HOH HOH . W 5 HOH F 5 305 78 HOH HOH . W 5 HOH F 6 306 67 HOH HOH . W 5 HOH F 7 307 31 HOH HOH . W 5 HOH F 8 308 64 HOH HOH . X 5 HOH G 1 101 70 HOH HOH . X 5 HOH G 2 102 26 HOH HOH . X 5 HOH G 3 103 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 4 -5.763 22.939 12.843 1 82.59 ? C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . K 4 -6.455 22.239 13.857 1 75.73 ? O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . K 4 -6.747 23.593 11.875 1 87.74 ? C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . K 4 -8.049 23.591 12.443 1 68.95 ? O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . K 4 -6.274 25.016 11.577 1 81.26 ? C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . K 4 -6.879 25.53 10.407 1 91.06 ? O3 GOL 203 A 1 HETATM 7 H H11 GOL . . . K 4 -5.119 22.25 12.298 1 99.21 ? H11 GOL 203 A 1 HETATM 8 H H12 GOL . . . K 4 -5.132 23.705 13.294 1 99.21 ? H12 GOL 203 A 1 HETATM 9 H HO1 GOL . . . K 4 -5.811 21.773 14.429 1 90.98 ? HO1 GOL 203 A 1 HETATM 10 H H2 GOL . . . K 4 -6.75 23.025 10.945 1 105.39 ? H2 GOL 203 A 1 HETATM 11 H HO2 GOL . . . K 4 -8.044 24.109 13.274 1 82.85 ? HO2 GOL 203 A 1 HETATM 12 H H31 GOL . . . K 4 -5.191 25.019 11.454 1 97.62 ? H31 GOL 203 A 1 HETATM 13 H H32 GOL . . . K 4 -6.515 25.662 12.421 1 97.62 ? H32 GOL 203 A 1 HETATM 14 H HO3 GOL . . . K 4 -6.7 24.928 9.655 1 109.37 ? HO3 GOL 203 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 521 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #