data_7P11
#
_model_server_result.job_id            Vp3fmrS-mOtJZtSHRFgeyQ 
_model_server_result.datetime_utc      '2024-12-04 09:29:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7p11 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    7P11 
#
_exptl.entry_id    7P11 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              331.32 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-[[(2~{R},3~{R},4~{R})-2-(hydroxymethyl)-3-oxidanyl-3,4-dihydro-2~{H}-pyran-4-yl]oxymethyl]quinoline-7-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7P11 
_cell.length_a            54.62 
_cell.length_b            61.394 
_cell.length_c            85.242 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7P11 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 E N N 
#
_chem_comp.formula           'C17 H17 N O6' 
_chem_comp.formula_weight    331.32 
_chem_comp.id                5KM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-[[(2~{R},3~{R},4~{R})-2-(hydroxymethyl)-3-oxidanyl-3,4-dihydro-2~{H}-pyran-4-yl]oxymethyl]quinoline-7-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C9 5KM doub 1 n y 
C8 C7 5KM sing 2 n y 
C9 C10 5KM sing 3 n y 
C13 C7 5KM doub 4 n y 
C13 C14 5KM sing 5 n y 
C7 C6 5KM sing 6 n y 
C10 C11 5KM sing 7 n n 
C10 C12 5KM doub 8 n y 
O3 C11 5KM doub 9 n n 
C14 C5 5KM doub 10 n y 
C11 O4 5KM sing 11 n n 
C6 C12 5KM sing 12 n y 
C6 N 5KM doub 13 n y 
C5 N 5KM sing 14 n y 
C5 C4 5KM sing 15 n n 
O2 C4 5KM sing 16 n n 
O2 C3 5KM sing 17 n n 
O1 C2 5KM sing 18 n n 
C2 C3 5KM sing 19 n n 
C2 C1 5KM sing 20 n n 
C O 5KM sing 21 n n 
C C1 5KM sing 22 n n 
C3 C15 5KM sing 23 n n 
C1 O5 5KM sing 24 n n 
O5 C16 5KM sing 25 n n 
C15 C16 5KM doub 26 n n 
C1 H1 5KM sing 27 n n 
C2 H2 5KM sing 28 n n 
C3 H3 5KM sing 29 n n 
C4 H4 5KM sing 30 n n 
C4 H5 5KM sing 31 n n 
O4 H6 5KM sing 32 n n 
C12 H7 5KM sing 33 n n 
C9 H8 5KM sing 34 n n 
C8 H9 5KM sing 35 n n 
C13 H10 5KM sing 36 n n 
C14 H11 5KM sing 37 n n 
O1 H12 5KM sing 38 n n 
C15 H13 5KM sing 39 n n 
C16 H14 5KM sing 40 n n 
C H15 5KM sing 41 n n 
C H16 5KM sing 42 n n 
O H17 5KM sing 43 n n 
#
_atom_sites.entry_id                     7P11 
_atom_sites.fract_transf_matrix[1][1]    0.018308 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016288 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011731 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 5KM A 1 201 194 5KM SDF . 
D 4 CL A 1 202 1 CL CL . 
E 3 5KM B 1 201 194 5KM SDF . 
F 5 HOH A 1 301 92 HOH HOH . 
F 5 HOH A 2 302 205 HOH HOH . 
F 5 HOH A 3 303 346 HOH HOH . 
F 5 HOH A 4 304 7 HOH HOH . 
F 5 HOH A 5 305 278 HOH HOH . 
F 5 HOH A 6 306 52 HOH HOH . 
F 5 HOH A 7 307 15 HOH HOH . 
F 5 HOH A 8 308 148 HOH HOH . 
F 5 HOH A 9 309 239 HOH HOH . 
F 5 HOH A 10 310 25 HOH HOH . 
F 5 HOH A 11 311 42 HOH HOH . 
F 5 HOH A 12 312 33 HOH HOH . 
F 5 HOH A 13 313 83 HOH HOH . 
F 5 HOH A 14 314 365 HOH HOH . 
F 5 HOH A 15 315 20 HOH HOH . 
F 5 HOH A 16 316 191 HOH HOH . 
F 5 HOH A 17 317 182 HOH HOH . 
F 5 HOH A 18 318 112 HOH HOH . 
F 5 HOH A 19 319 228 HOH HOH . 
F 5 HOH A 20 320 393 HOH HOH . 
F 5 HOH A 21 321 34 HOH HOH . 
F 5 HOH A 22 322 150 HOH HOH . 
F 5 HOH A 23 323 24 HOH HOH . 
F 5 HOH A 24 324 36 HOH HOH . 
F 5 HOH A 25 325 126 HOH HOH . 
F 5 HOH A 26 326 167 HOH HOH . 
F 5 HOH A 27 327 60 HOH HOH . 
F 5 HOH A 28 328 16 HOH HOH . 
F 5 HOH A 29 329 94 HOH HOH . 
F 5 HOH A 30 330 23 HOH HOH . 
F 5 HOH A 31 331 22 HOH HOH . 
F 5 HOH A 32 332 30 HOH HOH . 
F 5 HOH A 33 333 138 HOH HOH . 
F 5 HOH A 34 334 359 HOH HOH . 
F 5 HOH A 35 335 140 HOH HOH . 
F 5 HOH A 36 336 39 HOH HOH . 
F 5 HOH A 37 337 35 HOH HOH . 
F 5 HOH A 38 338 41 HOH HOH . 
F 5 HOH A 39 339 47 HOH HOH . 
F 5 HOH A 40 340 49 HOH HOH . 
F 5 HOH A 41 341 396 HOH HOH . 
F 5 HOH A 42 342 237 HOH HOH . 
F 5 HOH A 43 343 56 HOH HOH . 
F 5 HOH A 44 344 97 HOH HOH . 
F 5 HOH A 45 345 87 HOH HOH . 
F 5 HOH A 46 346 111 HOH HOH . 
F 5 HOH A 47 347 40 HOH HOH . 
F 5 HOH A 48 348 75 HOH HOH . 
F 5 HOH A 49 349 38 HOH HOH . 
F 5 HOH A 50 350 13 HOH HOH . 
F 5 HOH A 51 351 401 HOH HOH . 
F 5 HOH A 52 352 226 HOH HOH . 
F 5 HOH A 53 353 142 HOH HOH . 
F 5 HOH A 54 354 144 HOH HOH . 
F 5 HOH A 55 355 61 HOH HOH . 
F 5 HOH A 56 356 12 HOH HOH . 
F 5 HOH A 57 357 106 HOH HOH . 
F 5 HOH A 58 358 156 HOH HOH . 
F 5 HOH A 59 359 164 HOH HOH . 
F 5 HOH A 60 360 290 HOH HOH . 
F 5 HOH A 61 361 54 HOH HOH . 
F 5 HOH A 62 362 157 HOH HOH . 
F 5 HOH A 63 363 129 HOH HOH . 
F 5 HOH A 64 364 136 HOH HOH . 
F 5 HOH A 65 365 385 HOH HOH . 
F 5 HOH A 66 366 312 HOH HOH . 
F 5 HOH A 67 367 274 HOH HOH . 
F 5 HOH A 68 368 252 HOH HOH . 
F 5 HOH A 69 369 332 HOH HOH . 
F 5 HOH A 70 370 219 HOH HOH . 
F 5 HOH A 71 371 132 HOH HOH . 
F 5 HOH A 72 372 289 HOH HOH . 
F 5 HOH A 73 373 246 HOH HOH . 
F 5 HOH A 74 374 234 HOH HOH . 
F 5 HOH A 75 375 171 HOH HOH . 
F 5 HOH A 76 376 166 HOH HOH . 
F 5 HOH A 77 377 305 HOH HOH . 
F 5 HOH A 78 378 390 HOH HOH . 
F 5 HOH A 79 379 123 HOH HOH . 
F 5 HOH A 80 380 74 HOH HOH . 
F 5 HOH A 81 381 279 HOH HOH . 
F 5 HOH A 82 382 176 HOH HOH . 
F 5 HOH A 83 383 275 HOH HOH . 
F 5 HOH A 84 384 372 HOH HOH . 
F 5 HOH A 85 385 261 HOH HOH . 
F 5 HOH A 86 386 306 HOH HOH . 
G 5 HOH B 1 301 227 HOH HOH . 
G 5 HOH B 2 302 399 HOH HOH . 
G 5 HOH B 3 303 161 HOH HOH . 
G 5 HOH B 4 304 265 HOH HOH . 
G 5 HOH B 5 305 251 HOH HOH . 
G 5 HOH B 6 306 209 HOH HOH . 
G 5 HOH B 7 307 371 HOH HOH . 
G 5 HOH B 8 308 244 HOH HOH . 
G 5 HOH B 9 309 79 HOH HOH . 
G 5 HOH B 10 310 72 HOH HOH . 
G 5 HOH B 11 311 90 HOH HOH . 
G 5 HOH B 12 312 300 HOH HOH . 
G 5 HOH B 13 313 118 HOH HOH . 
G 5 HOH B 14 314 53 HOH HOH . 
G 5 HOH B 15 315 326 HOH HOH . 
G 5 HOH B 16 316 113 HOH HOH . 
G 5 HOH B 17 317 350 HOH HOH . 
G 5 HOH B 18 318 21 HOH HOH . 
G 5 HOH B 19 319 28 HOH HOH . 
G 5 HOH B 20 320 10 HOH HOH . 
G 5 HOH B 21 321 398 HOH HOH . 
G 5 HOH B 22 322 50 HOH HOH . 
G 5 HOH B 23 323 46 HOH HOH . 
G 5 HOH B 24 324 26 HOH HOH . 
G 5 HOH B 25 325 295 HOH HOH . 
G 5 HOH B 26 326 51 HOH HOH . 
G 5 HOH B 27 327 143 HOH HOH . 
G 5 HOH B 28 328 402 HOH HOH . 
G 5 HOH B 29 329 125 HOH HOH . 
G 5 HOH B 30 330 70 HOH HOH . 
G 5 HOH B 31 331 6 HOH HOH . 
G 5 HOH B 32 332 145 HOH HOH . 
G 5 HOH B 33 333 17 HOH HOH . 
G 5 HOH B 34 334 65 HOH HOH . 
G 5 HOH B 35 335 107 HOH HOH . 
G 5 HOH B 36 336 66 HOH HOH . 
G 5 HOH B 37 337 67 HOH HOH . 
G 5 HOH B 38 338 14 HOH HOH . 
G 5 HOH B 39 339 288 HOH HOH . 
G 5 HOH B 40 340 32 HOH HOH . 
G 5 HOH B 41 341 104 HOH HOH . 
G 5 HOH B 42 342 84 HOH HOH . 
G 5 HOH B 43 343 64 HOH HOH . 
G 5 HOH B 44 344 9 HOH HOH . 
G 5 HOH B 45 345 241 HOH HOH . 
G 5 HOH B 46 346 29 HOH HOH . 
G 5 HOH B 47 347 48 HOH HOH . 
G 5 HOH B 48 348 178 HOH HOH . 
G 5 HOH B 49 349 63 HOH HOH . 
G 5 HOH B 50 350 394 HOH HOH . 
G 5 HOH B 51 351 151 HOH HOH . 
G 5 HOH B 52 352 152 HOH HOH . 
G 5 HOH B 53 353 69 HOH HOH . 
G 5 HOH B 54 354 215 HOH HOH . 
G 5 HOH B 55 355 338 HOH HOH . 
G 5 HOH B 56 356 299 HOH HOH . 
G 5 HOH B 57 357 180 HOH HOH . 
G 5 HOH B 58 358 45 HOH HOH . 
G 5 HOH B 59 359 188 HOH HOH . 
G 5 HOH B 60 360 59 HOH HOH . 
G 5 HOH B 61 361 303 HOH HOH . 
G 5 HOH B 62 362 397 HOH HOH . 
G 5 HOH B 63 363 358 HOH HOH . 
G 5 HOH B 64 364 196 HOH HOH . 
G 5 HOH B 65 365 44 HOH HOH . 
G 5 HOH B 66 366 114 HOH HOH . 
G 5 HOH B 67 367 149 HOH HOH . 
G 5 HOH B 68 368 197 HOH HOH . 
G 5 HOH B 69 369 202 HOH HOH . 
G 5 HOH B 70 370 207 HOH HOH . 
G 5 HOH B 71 371 400 HOH HOH . 
G 5 HOH B 72 372 11 HOH HOH . 
G 5 HOH B 73 373 380 HOH HOH . 
G 5 HOH B 74 374 78 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 5KM . . . C 3 14.391 -6.165 9.674 1 47.47 ? C1 5KM 201 A 1 
HETATM 2 C C2 5KM . . . C 3 13.302 -5.371 8.968 1 48.07 ? C2 5KM 201 A 1 
HETATM 3 C C3 5KM . . . C 3 11.959 -5.763 9.573 1 51.21 ? C3 5KM 201 A 1 
HETATM 4 C C4 5KM . . . C 3 9.637 -5.329 9.355 1 59.33 ? C4 5KM 201 A 1 
HETATM 5 C C5 5KM . . . C 3 8.636 -4.765 8.381 1 62 ? C5 5KM 201 A 1 
HETATM 6 C C6 5KM . . . C 3 7.274 -3.032 7.686 1 64.32 ? C6 5KM 201 A 1 
HETATM 7 C C7 5KM . . . C 3 6.798 -3.815 6.477 1 63.9 ? C7 5KM 201 A 1 
HETATM 8 O O4 5KM . . . C 3 6.365 0.801 7.799 1 68.22 ? O4 5KM 201 A 1 
HETATM 9 C C11 5KM . . . C 3 5.484 0.072 7.345 1 67 ? C11 5KM 201 A 1 
HETATM 10 O O3 5KM . . . C 3 4.225 0.477 7.185 1 69.95 ? O3 5KM 201 A 1 
HETATM 11 C C10 5KM . . . C 3 5.899 -1.287 6.983 1 62.26 ? C10 5KM 201 A 1 
HETATM 12 C C12 5KM . . . C 3 6.804 -1.773 7.895 1 61.81 ? C12 5KM 201 A 1 
HETATM 13 N N 5KM . . . C 3 8.153 -3.525 8.587 1 63.48 ? N 5KM 201 A 1 
HETATM 14 C C9 5KM . . . C 3 5.433 -1.974 5.852 1 60.57 ? C9 5KM 201 A 1 
HETATM 15 C C8 5KM . . . C 3 5.879 -3.277 5.572 1 61.2 ? C8 5KM 201 A 1 
HETATM 16 C C13 5KM . . . C 3 7.341 -5.067 6.32 1 65.72 ? C13 5KM 201 A 1 
HETATM 17 C C14 5KM . . . C 3 8.264 -5.512 7.27 1 64.66 ? C14 5KM 201 A 1 
HETATM 18 O O2 5KM . . . C 3 10.957 -4.966 8.945 1 54.35 ? O2 5KM 201 A 1 
HETATM 19 O O1 5KM . . . C 3 13.51 -3.937 8.966 1 44.74 ? O1 5KM 201 A 1 
HETATM 20 C C15 5KM . . . C 3 11.998 -5.614 11.086 1 51.57 ? C15 5KM 201 A 1 
HETATM 21 C C16 5KM . . . C 3 13.138 -5.713 11.763 1 51.39 ? C16 5KM 201 A 1 
HETATM 22 O O5 5KM . . . C 3 14.395 -5.916 11.076 1 49.84 ? O5 5KM 201 A 1 
HETATM 23 C C 5KM . . . C 3 15.755 -5.807 9.144 1 45.52 ? C 5KM 201 A 1 
HETATM 24 O O 5KM . . . C 3 16.622 -6.831 9.56 1 45.12 ? O 5KM 201 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           25 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           319 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           24 
#