data_7P14 # _model_server_result.job_id m8dfvH8DZzwZXTbFQEOnDg _model_server_result.datetime_utc '2025-03-04 13:19:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p14 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 7P14 # _exptl.entry_id 7P14 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 792.075 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P14 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P14 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 23 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 28 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 97 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 102 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C42 H82 N O10 P' _chem_comp.formula_weight 792.075 _chem_comp.id P5S _chem_comp.mon_nstd_flag . _chem_comp.name O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'phosphatidyl serine' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA C P5S sing 235 n n O C P5S doub 236 n n C OXT P5S sing 237 n n CA N P5S sing 238 n n N HN P5S sing 239 n n N HNA P5S sing 240 n n O19 C1 P5S sing 241 n n C1 C2 P5S sing 242 n n C1 H1 P5S sing 243 n n C1 H1A P5S sing 244 n n C2 O37 P5S sing 245 n n C2 C3 P5S sing 246 n n C2 H2 P5S sing 247 n n O16 C3 P5S sing 248 n n C3 H3 P5S sing 249 n n C3 H3A P5S sing 250 n n CB CA P5S sing 251 n n CA HA P5S sing 252 n n CB OG P5S sing 253 n n CB HB P5S sing 254 n n CB HBA P5S sing 255 n n P12 OG P5S sing 256 n n O16 P12 P5S sing 257 n n O13 P12 P5S doub 258 n n P12 O15 P5S sing 259 n n O15 HO15 P5S sing 260 n n C20 C17 P5S sing 261 n n O19 C17 P5S sing 262 n n C17 O18 P5S doub 263 n n C21 C20 P5S sing 264 n n C20 H20 P5S sing 265 n n C20 H20A P5S sing 266 n n C21 C22 P5S sing 267 n n C21 H21 P5S sing 268 n n C21 H21A P5S sing 269 n n C23 C22 P5S sing 270 n n C22 H22 P5S sing 271 n n C22 H22A P5S sing 272 n n C24 C23 P5S sing 273 n n C23 H23 P5S sing 274 n n C23 H23A P5S sing 275 n n C25 C24 P5S sing 276 n n C24 H24 P5S sing 277 n n C24 H24A P5S sing 278 n n C26 C25 P5S sing 279 n n C25 H25 P5S sing 280 n n C25 H25A P5S sing 281 n n C26 C27 P5S sing 282 n n C26 H26 P5S sing 283 n n C26 H26A P5S sing 284 n n C27 C28 P5S sing 285 n n C27 H27 P5S sing 286 n n C27 H27A P5S sing 287 n n C29 C28 P5S sing 288 n n C28 H28 P5S sing 289 n n C28 H28A P5S sing 290 n n C30 C29 P5S sing 291 n n C29 H29 P5S sing 292 n n C29 H29A P5S sing 293 n n C31 C30 P5S sing 294 n n C30 H30 P5S sing 295 n n C30 H30A P5S sing 296 n n C31 C32 P5S sing 297 n n C31 H31 P5S sing 298 n n C31 H31A P5S sing 299 n n C33 C32 P5S sing 300 n n C32 H32 P5S sing 301 n n C32 H32A P5S sing 302 n n C33 C34 P5S sing 303 n n C33 H33 P5S sing 304 n n C33 H33A P5S sing 305 n n C35 C34 P5S sing 306 n n C34 H34 P5S sing 307 n n C34 H34A P5S sing 308 n n C36 C35 P5S sing 309 n n C35 H35 P5S sing 310 n n C35 H35A P5S sing 311 n n C36 H36 P5S sing 312 n n C36 H36A P5S sing 313 n n C36 H36B P5S sing 314 n n C38 O37 P5S sing 315 n n O47 C38 P5S doub 316 n n C38 C39 P5S sing 317 n n C40 C39 P5S sing 318 n n C39 H39 P5S sing 319 n n C39 H39A P5S sing 320 n n C41 C40 P5S sing 321 n n C40 H40 P5S sing 322 n n C40 H40A P5S sing 323 n n C42 C41 P5S sing 324 n n C41 H41 P5S sing 325 n n C41 H41A P5S sing 326 n n C43 C42 P5S sing 327 n n C42 H42 P5S sing 328 n n C42 H42A P5S sing 329 n n C43 C44 P5S sing 330 n n C43 H43 P5S sing 331 n n C43 H43A P5S sing 332 n n C44 C45 P5S sing 333 n n C44 H44 P5S sing 334 n n C44 H44A P5S sing 335 n n C45 C46 P5S sing 336 n n C45 H45 P5S sing 337 n n C45 H45A P5S sing 338 n n C46 C48 P5S sing 339 n n C46 H46 P5S sing 340 n n C46 H46A P5S sing 341 n n C48 C49 P5S sing 342 n n C48 H48 P5S sing 343 n n C48 H48A P5S sing 344 n n C49 C50 P5S sing 345 n n C49 H49 P5S sing 346 n n C49 H49A P5S sing 347 n n C50 C51 P5S sing 348 n n C50 H50 P5S sing 349 n n C50 H50A P5S sing 350 n n C51 C52 P5S sing 351 n n C51 H51 P5S sing 352 n n C51 H51A P5S sing 353 n n C53 C52 P5S sing 354 n n C52 H52 P5S sing 355 n n C52 H52A P5S sing 356 n n C53 C54 P5S sing 357 n n C53 H53 P5S sing 358 n n C53 H53A P5S sing 359 n n C55 C54 P5S sing 360 n n C54 H54 P5S sing 361 n n C54 H54A P5S sing 362 n n C55 C56 P5S sing 363 n n C55 H55 P5S sing 364 n n C55 H55A P5S sing 365 n n C56 H56 P5S sing 366 n n C56 H56A P5S sing 367 n n C56 H56B P5S sing 368 n n OXT HXT P5S sing 369 n n # _atom_sites.entry_id 7P14 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PLC A 1 401 399 PLC PLC . D 3 PLC A 1 402 400 PLC PLC . E 4 P5S A 1 403 401 P5S P5S . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C P5S . . . E 4 137.341 137.783 122.446 1 69.15 ? C P5S 403 A 1 HETATM 2 N N P5S . . . E 4 139.246 137.783 120.875 1 69.15 ? N P5S 403 A 1 HETATM 3 O O P5S . . . E 4 136.295 138.285 122.893 1 69.15 ? O P5S 403 A 1 HETATM 4 C C1 P5S . . . E 4 132.047 134.879 121.946 1 69.15 ? C1 P5S 403 A 1 HETATM 5 C C2 P5S . . . E 4 132.888 134.964 120.69 1 69.15 ? C2 P5S 403 A 1 HETATM 6 C C3 P5S . . . E 4 134.131 135.81 120.873 1 69.15 ? C3 P5S 403 A 1 HETATM 7 C CA P5S . . . E 4 138.053 138.545 121.327 1 69.15 ? CA P5S 403 A 1 HETATM 8 C CB P5S . . . E 4 137.13 138.829 120.162 1 69.15 ? CB P5S 403 A 1 HETATM 9 O OG P5S . . . E 4 136.76 137.57 119.553 1 69.15 ? OG P5S 403 A 1 HETATM 10 P P12 P5S . . . E 4 135.255 137.357 119.042 1 69.15 ? P12 P5S 403 A 1 HETATM 11 O O13 P5S . . . E 4 134.396 138.388 119.718 1 69.15 ? O13 P5S 403 A 1 HETATM 12 O O15 P5S . . . E 4 135.293 137.278 117.54 1 69.15 ? O15 P5S 403 A 1 HETATM 13 O O16 P5S . . . E 4 134.88 135.91 119.629 1 69.15 ? O16 P5S 403 A 1 HETATM 14 C C17 P5S . . . E 4 130.015 133.883 122.629 1 69.15 ? C17 P5S 403 A 1 HETATM 15 O O18 P5S . . . E 4 130.108 134.143 123.799 1 69.15 ? O18 P5S 403 A 1 HETATM 16 O O19 P5S . . . E 4 131.051 133.843 121.797 1 69.15 ? O19 P5S 403 A 1 HETATM 17 C C20 P5S . . . E 4 128.74 133.538 121.922 1 69.15 ? C20 P5S 403 A 1 HETATM 18 C C21 P5S . . . E 4 127.519 134.117 122.556 1 69.15 ? C21 P5S 403 A 1 HETATM 19 C C22 P5S . . . E 4 126.255 133.778 121.788 1 69.15 ? C22 P5S 403 A 1 HETATM 20 C C23 P5S . . . E 4 126.3 132.45 121.083 1 69.15 ? C23 P5S 403 A 1 HETATM 21 C C24 P5S . . . E 4 125.009 132.055 120.427 1 69.15 ? C24 P5S 403 A 1 HETATM 22 C C25 P5S . . . E 4 124.289 130.938 121.124 1 69.15 ? C25 P5S 403 A 1 HETATM 23 C C26 P5S . . . E 4 123.056 130.473 120.41 1 69.15 ? C26 P5S 403 A 1 HETATM 24 C C27 P5S . . . E 4 121.841 130.402 121.282 1 69.15 ? C27 P5S 403 A 1 HETATM 25 C C28 P5S . . . E 4 122.111 129.865 122.656 1 69.15 ? C28 P5S 403 A 1 HETATM 26 C C29 P5S . . . E 4 120.869 129.64 123.479 1 69.15 ? C29 P5S 403 A 1 HETATM 27 C C30 P5S . . . E 4 120.112 130.898 123.823 1 69.15 ? C30 P5S 403 A 1 HETATM 28 O O37 P5S . . . E 4 132.108 135.429 119.541 1 69.15 ? O37 P5S 403 A 1 HETATM 29 C C38 P5S . . . E 4 131.205 136.415 119.686 1 69.15 ? C38 P5S 403 A 1 HETATM 30 C C39 P5S . . . E 4 129.781 135.987 119.451 1 69.15 ? C39 P5S 403 A 1 HETATM 31 C C40 P5S . . . E 4 129.598 135.04 118.313 1 69.15 ? C40 P5S 403 A 1 HETATM 32 C C41 P5S . . . E 4 128.205 134.438 118.284 1 69.15 ? C41 P5S 403 A 1 HETATM 33 C C42 P5S . . . E 4 127.402 134.778 117.058 1 69.15 ? C42 P5S 403 A 1 HETATM 34 C C43 P5S . . . E 4 126.101 134.037 116.945 1 69.15 ? C43 P5S 403 A 1 HETATM 35 C C44 P5S . . . E 4 124.938 134.729 117.596 1 69.15 ? C44 P5S 403 A 1 HETATM 36 C C45 P5S . . . E 4 123.61 134.443 116.949 1 69.15 ? C45 P5S 403 A 1 HETATM 37 C C46 P5S . . . E 4 122.519 134.07 117.916 1 69.15 ? C46 P5S 403 A 1 HETATM 38 O O47 P5S . . . E 4 131.501 137.55 119.952 1 69.15 ? O47 P5S 403 A 1 HETATM 39 C C48 P5S . . . E 4 121.138 134.069 117.316 1 69.15 ? C48 P5S 403 A 1 HETATM 40 C C49 P5S . . . E 4 120.734 132.756 116.701 1 69.15 ? C49 P5S 403 A 1 HETATM 41 C C50 P5S . . . E 4 119.538 132.105 117.345 1 69.15 ? C50 P5S 403 A 1 HETATM 42 C C51 P5S . . . E 4 119.78 130.696 117.82 1 69.15 ? C51 P5S 403 A 1 HETATM 43 C C52 P5S . . . E 4 118.564 130.019 118.397 1 69.15 ? C52 P5S 403 A 1 HETATM 44 O OXT P5S . . . E 4 137.858 136.723 122.832 1 69.15 ? OXT P5S 403 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #