data_7P1H # _model_server_result.job_id LaG1NZPKBXQ42uEsW0pmbQ _model_server_result.datetime_utc '2024-11-23 12:56:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7p1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":402}' # _entry.id 7P1H # _exptl.entry_id 7P1H _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7P1H _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7P1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C GLU 69 B GLU 72 1_555 B N HIC 70 B HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 B C HIC 70 B HIC 73 1_555 B N GLY 71 B GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc1 B O ASN 9 B ASN 12 1_555 D CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.125 ? metalc ? metalc2 B OE1 GLN 134 B GLN 137 1_555 D CA CA . B CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc3 D CA CA . B CA 401 1_555 E O3G ATP . B ATP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc4 D CA CA . B CA 401 1_555 E O1B ATP . B ATP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc5 D CA CA . B CA 401 1_555 E O2G ATP . B ATP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7P1H _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA B 1 401 401 CA CA . E 5 ATP B 1 402 402 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . E 5 124.765 107.809 107.467 1 103.7 ? PG ATP 402 B 1 HETATM 2 O O1G ATP . . . E 5 126.003 108.307 106.761 1 103.7 ? O1G ATP 402 B 1 HETATM 3 O O2G ATP . . . E 5 124.965 107.448 108.918 1 103.7 ? O2G ATP 402 B 1 HETATM 4 O O3G ATP . . . E 5 123.967 106.797 106.682 1 103.7 ? O3G ATP 402 B 1 HETATM 5 P PB ATP . . . E 5 122.319 108.965 108.123 1 103.7 ? PB ATP 402 B 1 HETATM 6 O O1B ATP . . . E 5 121.895 107.519 108.085 1 103.7 ? O1B ATP 402 B 1 HETATM 7 O O2B ATP . . . E 5 122.256 109.745 109.411 1 103.7 ? O2B ATP 402 B 1 HETATM 8 O O3B ATP . . . E 5 123.803 109.094 107.517 1 103.7 ? O3B ATP 402 B 1 HETATM 9 P PA ATP . . . E 5 119.884 109.758 106.971 1 103.7 ? PA ATP 402 B 1 HETATM 10 O O1A ATP . . . E 5 119.437 108.517 106.244 1 103.7 ? O1A ATP 402 B 1 HETATM 11 O O2A ATP . . . E 5 119.335 110.064 108.341 1 103.7 ? O2A ATP 402 B 1 HETATM 12 O O3A ATP . . . E 5 121.486 109.753 107.007 1 103.7 ? O3A ATP 402 B 1 HETATM 13 O O5' ATP . . . E 5 119.707 111.018 105.999 1 103.7 ? O5' ATP 402 B 1 HETATM 14 C C5' ATP . . . E 5 120.201 112.279 106.43 1 103.7 ? C5' ATP 402 B 1 HETATM 15 C C4' ATP . . . E 5 120.651 113.032 105.191 1 103.7 ? C4' ATP 402 B 1 HETATM 16 O O4' ATP . . . E 5 119.542 113.287 104.327 1 103.7 ? O4' ATP 402 B 1 HETATM 17 C C3' ATP . . . E 5 121.254 114.385 105.514 1 103.7 ? C3' ATP 402 B 1 HETATM 18 O O3' ATP . . . E 5 122.477 114.549 104.797 1 103.7 ? O3' ATP 402 B 1 HETATM 19 C C2' ATP . . . E 5 120.234 115.384 105.023 1 103.7 ? C2' ATP 402 B 1 HETATM 20 O O2' ATP . . . E 5 120.841 116.606 104.598 1 103.7 ? O2' ATP 402 B 1 HETATM 21 C C1' ATP . . . E 5 119.612 114.635 103.864 1 103.7 ? C1' ATP 402 B 1 HETATM 22 N N9 ATP . . . E 5 118.264 115.141 103.535 1 103.7 ? N9 ATP 402 B 1 HETATM 23 C C8 ATP . . . E 5 117.222 115.267 104.37 1 103.7 ? C8 ATP 402 B 1 HETATM 24 N N7 ATP . . . E 5 116.139 115.759 103.715 1 103.7 ? N7 ATP 402 B 1 HETATM 25 C C5 ATP . . . E 5 116.493 115.943 102.434 1 103.7 ? C5 ATP 402 B 1 HETATM 26 C C6 ATP . . . E 5 115.845 116.439 101.203 1 103.7 ? C6 ATP 402 B 1 HETATM 27 N N6 ATP . . . E 5 114.557 116.841 101.209 1 103.7 ? N6 ATP 402 B 1 HETATM 28 N N1 ATP . . . E 5 116.581 116.475 100.073 1 103.7 ? N1 ATP 402 B 1 HETATM 29 C C2 ATP . . . E 5 117.866 116.08 100.043 1 103.7 ? C2 ATP 402 B 1 HETATM 30 N N3 ATP . . . E 5 118.514 115.624 101.125 1 103.7 ? N3 ATP 402 B 1 HETATM 31 C C4 ATP . . . E 5 117.894 115.533 102.321 1 103.7 ? C4 ATP 402 B 1 HETATM 32 H H4' ATP . . . E 5 121.403 112.426 104.67 1 103.7 ? H4' ATP 402 B 1 HETATM 33 H H3' ATP . . . E 5 121.399 114.491 106.597 1 103.7 ? H3' ATP 402 B 1 HETATM 34 H HO3' ATP . . . E 5 123.185 114.762 105.411 1 103.7 ? HO3' ATP 402 B 1 HETATM 35 H H2' ATP . . . E 5 119.486 115.564 105.806 1 103.7 ? H2' ATP 402 B 1 HETATM 36 H HO2' ATP . . . E 5 121.229 117.051 105.362 1 103.7 ? HO2' ATP 402 B 1 HETATM 37 H H1' ATP . . . E 5 120.271 114.707 102.991 1 103.7 ? H1' ATP 402 B 1 HETATM 38 H H8 ATP . . . E 5 117.245 115.013 105.42 1 103.7 ? H8 ATP 402 B 1 HETATM 39 H HN61 ATP . . . E 5 114.132 117.174 100.358 1 103.7 ? HN61 ATP 402 B 1 HETATM 40 H HN62 ATP . . . E 5 114.028 116.805 102.067 1 103.7 ? HN62 ATP 402 B 1 HETATM 41 H H2 ATP . . . E 5 118.405 116.13 99.106 1 103.7 ? H2 ATP 402 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 41 #